RNA–Protein interactions for RNA: ENST00000527215.6

CTSB-213, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-213ENST00000527215 CARMIL1Q5VZK9 1371 aa27.59■■■□□ 2.01
CTSB-213ENST00000527215 PRG4Q92954 1404 aaPredicted RBP27.58■■■□□ 2
CTSB-213ENST00000527215 JPH4Q96JJ6 628 aa27.56■■■□□ 2
CTSB-213ENST00000527215 KIAA0586Q9BVV6 1533 aa27.55■■■□□ 2
CTSB-213ENST00000527215 RAPGEF2Q9Y4G8 1499 aa27.42■■□□□ 1.98
CTSB-213ENST00000527215 IQGAP2Q13576 1575 aa27.41■■□□□ 1.98
CTSB-213ENST00000527215 CTTNBP2Q8WZ74 1663 aa27.33■■□□□ 1.97
CTSB-213ENST00000527215 ADCY10Q96PN6 1610 aa27.29■■□□□ 1.96
CTSB-213ENST00000527215 CARMIL2Q6F5E8 1435 aa27.24■■□□□ 1.95
CTSB-213ENST00000527215 PRXQ9BXM0 1461 aa27.24■■□□□ 1.95
CTSB-213ENST00000527215 KIF13AQ9H1H9 1805 aa27.23■■□□□ 1.95
CTSB-213ENST00000527215 UGGT2Q9NYU1 1516 aa27.21■■□□□ 1.95
CTSB-213ENST00000527215 DISP1Q96F81 1524 aa27.21■■□□□ 1.95
CTSB-213ENST00000527215 PTPRGP23470 1445 aa27.18■■□□□ 1.94
CTSB-213ENST00000527215 TNIKQ9UKE5 1360 aa27.18■■□□□ 1.94
CTSB-213ENST00000527215 KIAA0556O60303 1618 aa27.16■■□□□ 1.94
CTSB-213ENST00000527215 TTBK1Q5TCY1 1321 aaPredicted RBP27.15■■□□□ 1.94
CTSB-213ENST00000527215 NPM1P06748 294 aaKnown RBP eCLIP27.14■■□□□ 1.94
CTSB-213ENST00000527215 MAPKBP1O60336 1514 aa27.14■■□□□ 1.94
CTSB-213ENST00000527215 EEA1Q15075 1411 aa27.09■■□□□ 1.93
CTSB-213ENST00000527215 CSRNP3Q8WYN3 585 aa27.09■■□□□ 1.93
CTSB-213ENST00000527215 ABCC10Q5T3U5 1492 aa27.05■■□□□ 1.92
CTSB-213ENST00000527215 DIP2BQ9P265 1576 aa27.04■■□□□ 1.92
CTSB-213ENST00000527215 AEBP2Q6ZN18 517 aaPredicted RBP27.03■■□□□ 1.92
CTSB-213ENST00000527215 ABCC2Q92887 1545 aa27.02■■□□□ 1.92
CTSB-213ENST00000527215 UHRF1BP1LA0JNW5 1464 aa27.02■■□□□ 1.92
CTSB-213ENST00000527215 GOLGA3Q08378 1498 aa27.01■■□□□ 1.91
CTSB-213ENST00000527215 UACAQ9BZF9 1416 aa27■■□□□ 1.91
CTSB-213ENST00000527215 FAM69CQ0P6D2 419 aa26.99■■□□□ 1.91
CTSB-213ENST00000527215 CHIC1Q5VXU3 224 aa26.98■■□□□ 1.91
CTSB-213ENST00000527215 FAM9AQ8IZU1 332 aaPredicted RBP26.96■■□□□ 1.91
CTSB-213ENST00000527215 KIF21BO75037 1637 aa26.94■■□□□ 1.9
CTSB-213ENST00000527215 ZCCHC11Q5TAX3 1644 aaKnown RBP26.94■■□□□ 1.9
CTSB-213ENST00000527215 TSPOAP1O95153 1857 aa26.92■■□□□ 1.9
CTSB-213ENST00000527215 KDM5BQ9UGL1 1544 aa26.9■■□□□ 1.9
CTSB-213ENST00000527215 SAMD9Q5K651 1589 aa26.88■■□□□ 1.89
CTSB-213ENST00000527215 PLB1Q6P1J6 1458 aa26.87■■□□□ 1.89
CTSB-213ENST00000527215 ASXL2Q76L83 1435 aa26.87■■□□□ 1.89
CTSB-213ENST00000527215 ABCA8O94911 1581 aa26.87■■□□□ 1.89
CTSB-213ENST00000527215 GLI2P10070 1586 aa26.8■■□□□ 1.88
CTSB-213ENST00000527215 P3H3Q8IVL6 736 aa26.79■■□□□ 1.88
CTSB-213ENST00000527215 KDM6BO15054 1643 aa26.77■■□□□ 1.88
CTSB-213ENST00000527215 PPRC1Q5VV67 1664 aaKnown RBP26.76■■□□□ 1.87
CTSB-213ENST00000527215 EPRSP07814 1512 aaKnown RBP26.73■■□□□ 1.87
CTSB-213ENST00000527215 MAP3K4Q9Y6R4 1608 aa26.72■■□□□ 1.87
CTSB-213ENST00000527215 RANGAP1P46060 587 aaPredicted RBP26.71■■□□□ 1.87
CTSB-213ENST00000527215 RAPGEF6Q8TEU7 1601 aa26.7■■□□□ 1.86
CTSB-213ENST00000527215 WDR7Q9Y4E6 1490 aa26.69■■□□□ 1.86
CTSB-213ENST00000527215 EFCAB5A4FU69 1503 aa26.67■■□□□ 1.86
CTSB-213ENST00000527215 EHMT2Q96KQ7 1210 aa26.66■■□□□ 1.86
CTSB-213ENST00000527215 FHOD3Q2V2M9 1422 aa26.65■■□□□ 1.86
CTSB-213ENST00000527215 UBTFP17480 764 aaKnown RBP26.6■■□□□ 1.85
CTSB-213ENST00000527215 ATP10BO94823 1461 aa26.6■■□□□ 1.85
CTSB-213ENST00000527215 CFAP43Q8NDM7 1665 aa26.6■■□□□ 1.85
CTSB-213ENST00000527215 ARID3CA6NKF2 412 aa26.59■■□□□ 1.85
CTSB-213ENST00000527215 NUP153P49790 1475 aaKnown RBP26.54■■□□□ 1.84
CTSB-213ENST00000527215 TEX14Q8IWB6 1497 aa26.53■■□□□ 1.84
CTSB-213ENST00000527215 KCNH8Q96L42 1107 aa26.52■■□□□ 1.84
CTSB-213ENST00000527215 ARHGAP35Q9NRY4 1499 aa26.47■■□□□ 1.83
CTSB-213ENST00000527215 CD109Q6YHK3 1445 aa26.47■■□□□ 1.83
CTSB-213ENST00000527215 ABCA9Q8IUA7 1624 aa26.45■■□□□ 1.82
CTSB-213ENST00000527215 MAGI3Q5TCQ9 1506 aa26.44■■□□□ 1.82
CTSB-213ENST00000527215 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.43■■□□□ 1.82
CTSB-213ENST00000527215 HNRNPUL2Q1KMD3 747 aaKnown RBP26.43■■□□□ 1.82
CTSB-213ENST00000527215 COL17A1Q9UMD9 1497 aaPredicted RBP26.42■■□□□ 1.82
CTSB-213ENST00000527215 FMN1Q68DA7 1419 aa26.38■■□□□ 1.81
CTSB-213ENST00000527215 KDM4FA0A1W2PPD8 638 aa26.37■■□□□ 1.81
CTSB-213ENST00000527215 HECW1Q76N89 1606 aa26.36■■□□□ 1.81
CTSB-213ENST00000527215 CDK13Q14004 1512 aaKnown RBP26.34■■□□□ 1.81
CTSB-213ENST00000527215 LRRIQ1Q96JM4 1722 aa26.32■■□□□ 1.8
CTSB-213ENST00000527215 PLEKHD1A6NEE1 506 aa26.29■■□□□ 1.8
CTSB-213ENST00000527215 ADGRL1O94910 1474 aa26.27■■□□□ 1.8
CTSB-213ENST00000527215 ATP1B4Q9UN42 357 aaPredicted RBP26.25■■□□□ 1.79
CTSB-213ENST00000527215 TTC37Q6PGP7 1564 aa26.24■■□□□ 1.79
CTSB-213ENST00000527215 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.24■■□□□ 1.795e-6■□□□□ 9.5
CTSB-213ENST00000527215 ARAP3Q8WWN8 1544 aa26.24■■□□□ 1.79
CTSB-213ENST00000527215 PCF11O94913 1555 aaKnown RBP26.23■■□□□ 1.79
CTSB-213ENST00000527215 NEO1Q92859 1461 aa26.19■■□□□ 1.78
CTSB-213ENST00000527215 CLIP1P30622 1438 aa26.18■■□□□ 1.78
CTSB-213ENST00000527215 PHLDB1Q86UU1 1377 aa26.17■■□□□ 1.78
CTSB-213ENST00000527215 CFAP74Q9C0B2 1584 aa26.16■■□□□ 1.78
CTSB-213ENST00000527215 CASKIN1Q8WXD9 1431 aa26.14■■□□□ 1.78
CTSB-213ENST00000527215 MYO5CQ9NQX4 1742 aa26.14■■□□□ 1.78
CTSB-213ENST00000527215 KIF14Q15058 1648 aa26.14■■□□□ 1.77
CTSB-213ENST00000527215 FRMPD1Q5SYB0 1578 aa26.11■■□□□ 1.77
CTSB-213ENST00000527215 CDK11AQ9UQ88 783 aaPredicted RBP26.1■■□□□ 1.77
CTSB-213ENST00000527215 FANCAO15360 1455 aa26.1■■□□□ 1.77
CTSB-213ENST00000527215 CCDC18Q5T9S5 1454 aa26.1■■□□□ 1.77
CTSB-213ENST00000527215 FYCO1Q9BQS8 1478 aa26.09■■□□□ 1.77
CTSB-213ENST00000527215 RICTORQ6R327 1708 aa26.08■■□□□ 1.77
CTSB-213ENST00000527215 TROQ12816 1431 aaPredicted RBP26.08■■□□□ 1.77
CTSB-213ENST00000527215 AKNAQ7Z591 1439 aa26.05■■□□□ 1.76
CTSB-213ENST00000527215 RAPGEF3O95398 923 aa26.04■■□□□ 1.76
CTSB-213ENST00000527215 PLCH2O75038 1416 aa26.03■■□□□ 1.76
CTSB-213ENST00000527215 DENND4BO75064 1496 aaPredicted RBP26■■□□□ 1.75
CTSB-213ENST00000527215 CEP162Q5TB80 1403 aa26■■□□□ 1.75
CTSB-213ENST00000527215 CDC42BPBQ9Y5S2 1711 aa25.99■■□□□ 1.75
CTSB-213ENST00000527215 PREX2Q70Z35 1606 aa25.94■■□□□ 1.74
CTSB-213ENST00000527215 CDC42BPAQ5VT25 1732 aa25.94■■□□□ 1.74
CTSB-213ENST00000527215 ARHGAP5Q13017 1502 aa25.93■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms