RNA–Protein interactions for RNA: ENST00000527149.5

SMCO4-204, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCO4, Length 472 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-204ENST00000527149 KIAA0586Q9BVV6 1533 aa27.7■■■□□ 2.02
SMCO4-204ENST00000527149 ARHGEF11O15085 1522 aa27.66■■■□□ 2.02
SMCO4-204ENST00000527149 RIMBP3CA6NJZ7 1639 aa27.63■■■□□ 2.01
SMCO4-204ENST00000527149 RIMBP3BA6NNM3 1639 aa27.63■■■□□ 2.01
SMCO4-204ENST00000527149 RIMBP3Q9UFD9 1639 aa27.63■■■□□ 2.01
SMCO4-204ENST00000527149 CTTNBP2Q8WZ74 1663 aa27.63■■■□□ 2.01
SMCO4-204ENST00000527149 IQGAP2Q13576 1575 aa27.61■■■□□ 2.01
SMCO4-204ENST00000527149 ERCC6L2Q5T890 1561 aa27.57■■■□□ 2
SMCO4-204ENST00000527149 GOLGA3Q08378 1498 aa27.53■■■□□ 2
SMCO4-204ENST00000527149 JPH4Q96JJ6 628 aa27.51■■□□□ 1.99
SMCO4-204ENST00000527149 UGGT2Q9NYU1 1516 aa27.5■■□□□ 1.99
SMCO4-204ENST00000527149 PRG4Q92954 1404 aaPredicted RBP27.49■■□□□ 1.99
SMCO4-204ENST00000527149 ARAP1Q96P48 1450 aa27.48■■□□□ 1.99
SMCO4-204ENST00000527149 DISP1Q96F81 1524 aa27.42■■□□□ 1.98
SMCO4-204ENST00000527149 KIAA0556O60303 1618 aa27.37■■□□□ 1.97
SMCO4-204ENST00000527149 SAMD9Q5K651 1589 aa27.33■■□□□ 1.97
SMCO4-204ENST00000527149 EHMT2Q96KQ7 1210 aa27.32■■□□□ 1.96
SMCO4-204ENST00000527149 CARMIL2Q6F5E8 1435 aa27.32■■□□□ 1.96
SMCO4-204ENST00000527149 UBTFP17480 764 aaKnown RBP27.27■■□□□ 1.96
SMCO4-204ENST00000527149 TNIKQ9UKE5 1360 aa27.24■■□□□ 1.95
SMCO4-204ENST00000527149 CYB5RLQ6IPT4 315 aa27.24■■□□□ 1.95
SMCO4-204ENST00000527149 EFCAB5A4FU69 1503 aa27.21■■□□□ 1.95
SMCO4-204ENST00000527149 PTPRGP23470 1445 aa27.17■■□□□ 1.94
SMCO4-204ENST00000527149 ARHGAP35Q9NRY4 1499 aa27.14■■□□□ 1.94
SMCO4-204ENST00000527149 ADCY10Q96PN6 1610 aa27.12■■□□□ 1.93
SMCO4-204ENST00000527149 FHOD3Q2V2M9 1422 aa27.1■■□□□ 1.93
SMCO4-204ENST00000527149 LOC105371045A0A1W2PR82 267 aa27.1■■□□□ 1.93
SMCO4-204ENST00000527149 RANGAP1P46060 587 aaPredicted RBP27.08■■□□□ 1.93
SMCO4-204ENST00000527149 ABCA8O94911 1581 aa27.06■■□□□ 1.92
SMCO4-204ENST00000527149 P3H3Q8IVL6 736 aa27.06■■□□□ 1.92
SMCO4-204ENST00000527149 UHRF1BP1LA0JNW5 1464 aa27.05■■□□□ 1.92
SMCO4-204ENST00000527149 ABCC2Q92887 1545 aa27.05■■□□□ 1.92
SMCO4-204ENST00000527149 UACAQ9BZF9 1416 aa27.04■■□□□ 1.92
SMCO4-204ENST00000527149 PLB1Q6P1J6 1458 aa27.04■■□□□ 1.92
SMCO4-204ENST00000527149 TTBK1Q5TCY1 1321 aaPredicted RBP27.03■■□□□ 1.92
SMCO4-204ENST00000527149 CLIP1P30622 1438 aa27.02■■□□□ 1.92
SMCO4-204ENST00000527149 CEP162Q5TB80 1403 aa27■■□□□ 1.91
SMCO4-204ENST00000527149 RAPGEF6Q8TEU7 1601 aa26.94■■□□□ 1.9
SMCO4-204ENST00000527149 KDM5BQ9UGL1 1544 aa26.93■■□□□ 1.9
SMCO4-204ENST00000527149 FMN1Q68DA7 1419 aa26.9■■□□□ 1.9
SMCO4-204ENST00000527149 NUP153P49790 1475 aaKnown RBP26.87■■□□□ 1.89
SMCO4-204ENST00000527149 ZCCHC11Q5TAX3 1644 aaKnown RBP26.87■■□□□ 1.89
SMCO4-204ENST00000527149 MAPKBP1O60336 1514 aa26.87■■□□□ 1.89
SMCO4-204ENST00000527149 PCF11O94913 1555 aaKnown RBP26.82■■□□□ 1.88
SMCO4-204ENST00000527149 ATP10BO94823 1461 aa26.79■■□□□ 1.88
SMCO4-204ENST00000527149 HECW1Q76N89 1606 aa26.78■■□□□ 1.88
SMCO4-204ENST00000527149 CASKIN1Q8WXD9 1431 aa26.76■■□□□ 1.87
SMCO4-204ENST00000527149 LRRIQ1Q96JM4 1722 aa26.76■■□□□ 1.87
SMCO4-204ENST00000527149 NPM1P06748 294 aaKnown RBP eCLIP26.74■■□□□ 1.87
SMCO4-204ENST00000527149 FYCO1Q9BQS8 1478 aa26.74■■□□□ 1.87
SMCO4-204ENST00000527149 ASXL2Q76L83 1435 aa26.73■■□□□ 1.87
SMCO4-204ENST00000527149 EPRSP07814 1512 aaKnown RBP26.7■■□□□ 1.87
SMCO4-204ENST00000527149 CDK13Q14004 1512 aaKnown RBP26.7■■□□□ 1.87
SMCO4-204ENST00000527149 DIP2BQ9P265 1576 aa26.69■■□□□ 1.86
SMCO4-204ENST00000527149 KIF13AQ9H1H9 1805 aa26.69■■□□□ 1.86
SMCO4-204ENST00000527149 ARID3CA6NKF2 412 aa26.68■■□□□ 1.86
SMCO4-204ENST00000527149 ABCC10Q5T3U5 1492 aa26.68■■□□□ 1.86
SMCO4-204ENST00000527149 WDR7Q9Y4E6 1490 aa26.68■■□□□ 1.86
SMCO4-204ENST00000527149 VPS8Q8N3P4 1428 aa26.65■■□□□ 1.86
SMCO4-204ENST00000527149 CCDC18Q5T9S5 1454 aa26.62■■□□□ 1.85
SMCO4-204ENST00000527149 GLI2P10070 1586 aa26.59■■□□□ 1.85
SMCO4-204ENST00000527149 ATP1B4Q9UN42 357 aaPredicted RBP26.54■■□□□ 1.84
SMCO4-204ENST00000527149 MAGI3Q5TCQ9 1506 aa26.52■■□□□ 1.84
SMCO4-204ENST00000527149 CFAP43Q8NDM7 1665 aa26.51■■□□□ 1.83
SMCO4-204ENST00000527149 TRHP20396 242 aaPredicted RBP26.51■■□□□ 1.83
SMCO4-204ENST00000527149 MAP3K4Q9Y6R4 1608 aa26.5■■□□□ 1.83
SMCO4-204ENST00000527149 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.49■■□□□ 1.83
SMCO4-204ENST00000527149 HNRNPUL2Q1KMD3 747 aaKnown RBP26.49■■□□□ 1.83
SMCO4-204ENST00000527149 FAM69CQ0P6D2 419 aa26.48■■□□□ 1.83
SMCO4-204ENST00000527149 ABCA9Q8IUA7 1624 aa26.47■■□□□ 1.83
SMCO4-204ENST00000527149 TROQ12816 1431 aaPredicted RBP26.47■■□□□ 1.83
SMCO4-204ENST00000527149 TIAM1Q13009 1591 aa26.46■■□□□ 1.83
SMCO4-204ENST00000527149 PPRC1Q5VV67 1664 aaKnown RBP26.45■■□□□ 1.82
SMCO4-204ENST00000527149 PLEKHD1A6NEE1 506 aa26.44■■□□□ 1.82
SMCO4-204ENST00000527149 KIF14Q15058 1648 aa26.43■■□□□ 1.82
SMCO4-204ENST00000527149 TTC37Q6PGP7 1564 aa26.41■■□□□ 1.82
SMCO4-204ENST00000527149 MAP3K1Q13233 1512 aa26.41■■□□□ 1.82
SMCO4-204ENST00000527149 KCNH8Q96L42 1107 aa26.41■■□□□ 1.82
SMCO4-204ENST00000527149 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.4■■□□□ 1.82
SMCO4-204ENST00000527149 CDK11AQ9UQ88 783 aaPredicted RBP26.39■■□□□ 1.82
SMCO4-204ENST00000527149 TSPOAP1O95153 1857 aa26.38■■□□□ 1.81
SMCO4-204ENST00000527149 EHBP1L1Q8N3D4 1523 aa26.36■■□□□ 1.81
SMCO4-204ENST00000527149 CD109Q6YHK3 1445 aa26.33■■□□□ 1.81
SMCO4-204ENST00000527149 MTUS2Q5JR59 1369 aa26.3■■□□□ 1.8
SMCO4-204ENST00000527149 LRRC9Q6ZRR7 1453 aa26.3■■□□□ 1.8
SMCO4-204ENST00000527149 MYO5CQ9NQX4 1742 aa26.26■■□□□ 1.79
SMCO4-204ENST00000527149 TEX14Q8IWB6 1497 aa26.25■■□□□ 1.79
SMCO4-204ENST00000527149 ARAP3Q8WWN8 1544 aa26.24■■□□□ 1.79
SMCO4-204ENST00000527149 CDC42BPAQ5VT25 1732 aa26.22■■□□□ 1.79
SMCO4-204ENST00000527149 PREX2Q70Z35 1606 aa26.22■■□□□ 1.79
SMCO4-204ENST00000527149 KANK4Q5T7N3 995 aaPredicted RBP26.22■■□□□ 1.79
SMCO4-204ENST00000527149 SUPT6HQ7KZ85 1726 aaKnown RBP26.22■■□□□ 1.79
SMCO4-204ENST00000527149 PLCH2O75038 1416 aa26.21■■□□□ 1.79
SMCO4-204ENST00000527149 CDC42BPBQ9Y5S2 1711 aa26.19■■□□□ 1.78
SMCO4-204ENST00000527149 NCOA2Q15596 1464 aa26.18■■□□□ 1.78
SMCO4-204ENST00000527149 NEO1Q92859 1461 aa26.17■■□□□ 1.78
SMCO4-204ENST00000527149 GPATCH8Q9UKJ3 1502 aaKnown RBP26.16■■□□□ 1.78
SMCO4-204ENST00000527149 FANCAO15360 1455 aa26.15■■□□□ 1.78
SMCO4-204ENST00000527149 CFAP74Q9C0B2 1584 aa26.15■■□□□ 1.78
SMCO4-204ENST00000527149 COL17A1Q9UMD9 1497 aaPredicted RBP26.13■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms