RNA–Protein interactions for RNA: ENST00000527064.1

NXF1-204, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-204ENST00000527064 CYB5RLQ6IPT4 315 aa24.22■■□□□ 1.47
NXF1-204ENST00000527064 EEA1Q15075 1411 aa24.18■■□□□ 1.46
NXF1-204ENST00000527064 JPH4Q96JJ6 628 aa24.16■■□□□ 1.46
NXF1-204ENST00000527064 CHIC1Q5VXU3 224 aa24.15■■□□□ 1.46
NXF1-204ENST00000527064 PRG4Q92954 1404 aaPredicted RBP24.15■■□□□ 1.46
NXF1-204ENST00000527064 ERCC6L2Q5T890 1561 aa24.15■■□□□ 1.46
NXF1-204ENST00000527064 PRXQ9BXM0 1461 aa24.13■■□□□ 1.45
NXF1-204ENST00000527064 IQGAP2Q13576 1575 aa24.11■■□□□ 1.45
NXF1-204ENST00000527064 CSRNP3Q8WYN3 585 aa24.06■■□□□ 1.44
NXF1-204ENST00000527064 CTTNBP2Q8WZ74 1663 aa24.02■■□□□ 1.44
NXF1-204ENST00000527064 CARMIL2Q6F5E8 1435 aa24■■□□□ 1.43
NXF1-204ENST00000527064 UGGT2Q9NYU1 1516 aa23.96■■□□□ 1.43
NXF1-204ENST00000527064 FAM9AQ8IZU1 332 aaPredicted RBP23.93■■□□□ 1.42
NXF1-204ENST00000527064 KIF21BO75037 1637 aa23.91■■□□□ 1.42
NXF1-204ENST00000527064 TNIKQ9UKE5 1360 aa23.9■■□□□ 1.42
NXF1-204ENST00000527064 DISP1Q96F81 1524 aa23.89■■□□□ 1.42
NXF1-204ENST00000527064 KIAA0556O60303 1618 aa23.87■■□□□ 1.41
NXF1-204ENST00000527064 GOLGA3Q08378 1498 aa23.87■■□□□ 1.41
NXF1-204ENST00000527064 PTPRGP23470 1445 aa23.86■■□□□ 1.41
NXF1-204ENST00000527064 ADCY10Q96PN6 1610 aa23.8■■□□□ 1.4
NXF1-204ENST00000527064 TRHP20396 242 aaPredicted RBP23.76■■□□□ 1.39
NXF1-204ENST00000527064 TTBK1Q5TCY1 1321 aaPredicted RBP23.76■■□□□ 1.39
NXF1-204ENST00000527064 NPM1P06748 294 aaKnown RBP eCLIP23.75■■□□□ 1.39
NXF1-204ENST00000527064 UACAQ9BZF9 1416 aa23.72■■□□□ 1.39
NXF1-204ENST00000527064 UHRF1BP1LA0JNW5 1464 aa23.71■■□□□ 1.39
NXF1-204ENST00000527064 SAMD9Q5K651 1589 aa23.7■■□□□ 1.38
NXF1-204ENST00000527064 ABCC2Q92887 1545 aa23.69■■□□□ 1.38
NXF1-204ENST00000527064 MAPKBP1O60336 1514 aa23.69■■□□□ 1.38
NXF1-204ENST00000527064 UBTFP17480 764 aaKnown RBP23.65■■□□□ 1.38
NXF1-204ENST00000527064 EFCAB5A4FU69 1503 aa23.64■■□□□ 1.37
NXF1-204ENST00000527064 EHMT2Q96KQ7 1210 aa23.61■■□□□ 1.37
NXF1-204ENST00000527064 PLB1Q6P1J6 1458 aa23.6■■□□□ 1.37
NXF1-204ENST00000527064 ABCA8O94911 1581 aa23.59■■□□□ 1.37
NXF1-204ENST00000527064 KDM5BQ9UGL1 1544 aa23.59■■□□□ 1.37
NXF1-204ENST00000527064 RANGAP1P46060 587 aaPredicted RBP23.58■■□□□ 1.37
NXF1-204ENST00000527064 P3H3Q8IVL6 736 aa23.58■■□□□ 1.37
NXF1-204ENST00000527064 ABCC10Q5T3U5 1492 aa23.56■■□□□ 1.36
NXF1-204ENST00000527064 ZCCHC11Q5TAX3 1644 aaKnown RBP23.54■■□□□ 1.36
NXF1-204ENST00000527064 FHOD3Q2V2M9 1422 aa23.53■■□□□ 1.36
NXF1-204ENST00000527064 KIF13AQ9H1H9 1805 aa23.53■■□□□ 1.36
NXF1-204ENST00000527064 DIP2BQ9P265 1576 aa23.52■■□□□ 1.36
NXF1-204ENST00000527064 ASXL2Q76L83 1435 aa23.51■■□□□ 1.35
NXF1-204ENST00000527064 RAPGEF6Q8TEU7 1601 aa23.48■■□□□ 1.35
NXF1-204ENST00000527064 FAM69CQ0P6D2 419 aa23.47■■□□□ 1.35
NXF1-204ENST00000527064 ARHGAP35Q9NRY4 1499 aa23.43■■□□□ 1.34
NXF1-204ENST00000527064 WDR7Q9Y4E6 1490 aa23.42■■□□□ 1.34
NXF1-204ENST00000527064 GLI2P10070 1586 aa23.4■■□□□ 1.34
NXF1-204ENST00000527064 FMN1Q68DA7 1419 aa23.4■■□□□ 1.34
NXF1-204ENST00000527064 EPRSP07814 1512 aaKnown RBP23.38■■□□□ 1.33
NXF1-204ENST00000527064 NUP153P49790 1475 aaKnown RBP23.37■■□□□ 1.33
NXF1-204ENST00000527064 ATP10BO94823 1461 aa23.36■■□□□ 1.33
NXF1-204ENST00000527064 ARID3CA6NKF2 412 aa23.32■■□□□ 1.32
NXF1-204ENST00000527064 CLIP1P30622 1438 aa23.31■■□□□ 1.32
NXF1-204ENST00000527064 HECW1Q76N89 1606 aa23.3■■□□□ 1.32
NXF1-204ENST00000527064 MAP3K4Q9Y6R4 1608 aa23.29■■□□□ 1.32
NXF1-204ENST00000527064 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.28■■□□□ 1.32
NXF1-204ENST00000527064 HNRNPUL2Q1KMD3 747 aaKnown RBP23.28■■□□□ 1.32
NXF1-204ENST00000527064 TSPOAP1O95153 1857 aa23.28■■□□□ 1.32
NXF1-204ENST00000527064 CFAP43Q8NDM7 1665 aa23.24■■□□□ 1.31
NXF1-204ENST00000527064 KCNH8Q96L42 1107 aa23.23■■□□□ 1.31
NXF1-204ENST00000527064 TEX14Q8IWB6 1497 aa23.23■■□□□ 1.31
NXF1-204ENST00000527064 PPRC1Q5VV67 1664 aaKnown RBP23.22■■□□□ 1.31
NXF1-204ENST00000527064 CEP162Q5TB80 1403 aa23.2■■□□□ 1.3
NXF1-204ENST00000527064 CDK13Q14004 1512 aaKnown RBP23.19■■□□□ 1.3
NXF1-204ENST00000527064 ATP1B4Q9UN42 357 aaPredicted RBP23.19■■□□□ 1.3
NXF1-204ENST00000527064 PCF11O94913 1555 aaKnown RBP23.18■■□□□ 1.3
NXF1-204ENST00000527064 CD109Q6YHK3 1445 aa23.18■■□□□ 1.3
NXF1-204ENST00000527064 CASKIN1Q8WXD9 1431 aa23.18■■□□□ 1.3
NXF1-204ENST00000527064 PLEKHD1A6NEE1 506 aa23.18■■□□□ 1.3
NXF1-204ENST00000527064 KDM6BO15054 1643 aa23.16■■□□□ 1.3
NXF1-204ENST00000527064 ABCA9Q8IUA7 1624 aa23.16■■□□□ 1.3
NXF1-204ENST00000527064 FYCO1Q9BQS8 1478 aa23.16■■□□□ 1.3
NXF1-204ENST00000527064 MAGI3Q5TCQ9 1506 aa23.15■■□□□ 1.3
NXF1-204ENST00000527064 CCDC18Q5T9S5 1454 aa23.14■■□□□ 1.29
NXF1-204ENST00000527064 CDK11AQ9UQ88 783 aaPredicted RBP23.13■■□□□ 1.29
NXF1-204ENST00000527064 LOC105371045A0A1W2PR82 267 aa23.11■■□□□ 1.29
NXF1-204ENST00000527064 LRRIQ1Q96JM4 1722 aa23.08■■□□□ 1.29
NXF1-204ENST00000527064 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.04■■□□□ 1.28
NXF1-204ENST00000527064 TROQ12816 1431 aaPredicted RBP23.04■■□□□ 1.28
NXF1-204ENST00000527064 KIF14Q15058 1648 aa23.03■■□□□ 1.28
NXF1-204ENST00000527064 TTC37Q6PGP7 1564 aa23.01■■□□□ 1.27
NXF1-204ENST00000527064 PHLDB1Q86UU1 1377 aa23.01■■□□□ 1.27
NXF1-204ENST00000527064 NEO1Q92859 1461 aa22.99■■□□□ 1.27
NXF1-204ENST00000527064 CFAP74Q9C0B2 1584 aa22.98■■□□□ 1.27
NXF1-204ENST00000527064 COL17A1Q9UMD9 1497 aaPredicted RBP22.96■■□□□ 1.27
NXF1-204ENST00000527064 ARAP3Q8WWN8 1544 aa22.95■■□□□ 1.26
NXF1-204ENST00000527064 VPS8Q8N3P4 1428 aa22.93■■□□□ 1.26
NXF1-204ENST00000527064 FANCAO15360 1455 aa22.92■■□□□ 1.26
NXF1-204ENST00000527064 MYO5CQ9NQX4 1742 aa22.92■■□□□ 1.26
NXF1-204ENST00000527064 PLCH2O75038 1416 aa22.91■■□□□ 1.26
NXF1-204ENST00000527064 AKNAQ7Z591 1439 aa22.87■■□□□ 1.25
NXF1-204ENST00000527064 MTUS2Q5JR59 1369 aa22.86■■□□□ 1.25
NXF1-204ENST00000527064 EHBP1L1Q8N3D4 1523 aa22.84■■□□□ 1.25
NXF1-204ENST00000527064 ARHGAP5Q13017 1502 aa22.83■■□□□ 1.25
NXF1-204ENST00000527064 EFCAB2Q5VUJ9 269 aa22.82■■□□□ 1.24
NXF1-204ENST00000527064 PREX2Q70Z35 1606 aa22.82■■□□□ 1.24
NXF1-204ENST00000527064 DENND4BO75064 1496 aaPredicted RBP22.81■■□□□ 1.24
NXF1-204ENST00000527064 TIAM1Q13009 1591 aa22.8■■□□□ 1.24
NXF1-204ENST00000527064 ADGRL1O94910 1474 aa22.8■■□□□ 1.24
NXF1-204ENST00000527064 FRMPD1Q5SYB0 1578 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms