RNA–Protein interactions for RNA: ENST00000526163.5

NXF1-203, Transcript of nuclear RNA export factor 1, humanhuman

TSL 4

Gene NXF1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-203ENST00000526163 KIAA0586Q9BVV6 1533 aa19.1■□□□□ 0.65
NXF1-203ENST00000526163 CSRNP3Q8WYN3 585 aa19.06■□□□□ 0.64
NXF1-203ENST00000526163 JPH4Q96JJ6 628 aa19.06■□□□□ 0.64
NXF1-203ENST00000526163 PRXQ9BXM0 1461 aa19.05■□□□□ 0.64
NXF1-203ENST00000526163 ARAP1Q96P48 1450 aa19.03■□□□□ 0.64
NXF1-203ENST00000526163 CYB5RLQ6IPT4 315 aa19.03■□□□□ 0.64
NXF1-203ENST00000526163 PRG4Q92954 1404 aaPredicted RBP19■□□□□ 0.63
NXF1-203ENST00000526163 IQGAP2Q13576 1575 aa18.97■□□□□ 0.63
NXF1-203ENST00000526163 ERCC6L2Q5T890 1561 aa18.96■□□□□ 0.63
NXF1-203ENST00000526163 FAM9AQ8IZU1 332 aaPredicted RBP18.92■□□□□ 0.62
NXF1-203ENST00000526163 CTTNBP2Q8WZ74 1663 aa18.92■□□□□ 0.62
NXF1-203ENST00000526163 CARMIL2Q6F5E8 1435 aa18.9■□□□□ 0.62
NXF1-203ENST00000526163 UGGT2Q9NYU1 1516 aa18.88■□□□□ 0.61
NXF1-203ENST00000526163 KIF21BO75037 1637 aa18.88■□□□□ 0.61
NXF1-203ENST00000526163 DISP1Q96F81 1524 aa18.82■□□□□ 0.6
NXF1-203ENST00000526163 TNIKQ9UKE5 1360 aa18.81■□□□□ 0.6
NXF1-203ENST00000526163 GOLGA3Q08378 1498 aa18.81■□□□□ 0.6
NXF1-203ENST00000526163 PTPRGP23470 1445 aa18.8■□□□□ 0.6
NXF1-203ENST00000526163 KIAA0556O60303 1618 aa18.77■□□□□ 0.6
NXF1-203ENST00000526163 TRHP20396 242 aaPredicted RBP18.73■□□□□ 0.59
NXF1-203ENST00000526163 UBTFP17480 764 aaKnown RBP18.71■□□□□ 0.59
NXF1-203ENST00000526163 NPM1P06748 294 aaKnown RBP eCLIP18.7■□□□□ 0.58
NXF1-203ENST00000526163 ADCY10Q96PN6 1610 aa18.69■□□□□ 0.58
NXF1-203ENST00000526163 TTBK1Q5TCY1 1321 aaPredicted RBP18.68■□□□□ 0.58
NXF1-203ENST00000526163 UACAQ9BZF9 1416 aa18.67■□□□□ 0.58
NXF1-203ENST00000526163 UHRF1BP1LA0JNW5 1464 aa18.67■□□□□ 0.58
NXF1-203ENST00000526163 SAMD9Q5K651 1589 aa18.67■□□□□ 0.58
NXF1-203ENST00000526163 EFCAB5A4FU69 1503 aa18.63■□□□□ 0.57
NXF1-203ENST00000526163 ABCC2Q92887 1545 aa18.63■□□□□ 0.57
NXF1-203ENST00000526163 EHMT2Q96KQ7 1210 aa18.62■□□□□ 0.57
NXF1-203ENST00000526163 MAPKBP1O60336 1514 aa18.6■□□□□ 0.57
NXF1-203ENST00000526163 P3H3Q8IVL6 736 aa18.6■□□□□ 0.57
NXF1-203ENST00000526163 RANGAP1P46060 587 aaPredicted RBP18.58■□□□□ 0.56
NXF1-203ENST00000526163 ABCA8O94911 1581 aa18.57■□□□□ 0.56
NXF1-203ENST00000526163 KDM5BQ9UGL1 1544 aa18.57■□□□□ 0.56
NXF1-203ENST00000526163 PLB1Q6P1J6 1458 aa18.57■□□□□ 0.56
NXF1-203ENST00000526163 FHOD3Q2V2M9 1422 aa18.52■□□□□ 0.56
NXF1-203ENST00000526163 ABCC10Q5T3U5 1492 aa18.51■□□□□ 0.55
NXF1-203ENST00000526163 ZCCHC11Q5TAX3 1644 aaKnown RBP18.5■□□□□ 0.55
NXF1-203ENST00000526163 ARHGAP35Q9NRY4 1499 aa18.5■□□□□ 0.55
NXF1-203ENST00000526163 KIF13AQ9H1H9 1805 aa18.49■□□□□ 0.55
NXF1-203ENST00000526163 RAPGEF6Q8TEU7 1601 aa18.49■□□□□ 0.55
NXF1-203ENST00000526163 ASXL2Q76L83 1435 aa18.49■□□□□ 0.55
NXF1-203ENST00000526163 FMN1Q68DA7 1419 aa18.47■□□□□ 0.55
NXF1-203ENST00000526163 FAM69CQ0P6D2 419 aa18.45■□□□□ 0.54
NXF1-203ENST00000526163 DIP2BQ9P265 1576 aa18.45■□□□□ 0.54
NXF1-203ENST00000526163 AEBP2Q6ZN18 517 aaPredicted RBP18.43■□□□□ 0.54
NXF1-203ENST00000526163 ATP10BO94823 1461 aa18.42■□□□□ 0.54
NXF1-203ENST00000526163 CLIP1P30622 1438 aa18.41■□□□□ 0.54
NXF1-203ENST00000526163 WDR7Q9Y4E6 1490 aa18.41■□□□□ 0.54
NXF1-203ENST00000526163 NUP153P49790 1475 aaKnown RBP18.4■□□□□ 0.54
NXF1-203ENST00000526163 GLI2P10070 1586 aa18.4■□□□□ 0.54
NXF1-203ENST00000526163 EPRSP07814 1512 aaKnown RBP18.38■□□□□ 0.53
NXF1-203ENST00000526163 LOC105371045A0A1W2PR82 267 aa18.36■□□□□ 0.53
NXF1-203ENST00000526163 ARID3CA6NKF2 412 aa18.35■□□□□ 0.53
NXF1-203ENST00000526163 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.35■□□□□ 0.53
NXF1-203ENST00000526163 HNRNPUL2Q1KMD3 747 aaKnown RBP18.35■□□□□ 0.53
NXF1-203ENST00000526163 HECW1Q76N89 1606 aa18.34■□□□□ 0.53
NXF1-203ENST00000526163 CEP162Q5TB80 1403 aa18.33■□□□□ 0.53
NXF1-203ENST00000526163 PLEKHD1A6NEE1 506 aa18.32■□□□□ 0.52
NXF1-203ENST00000526163 CASKIN1Q8WXD9 1431 aa18.31■□□□□ 0.52
NXF1-203ENST00000526163 KCNH8Q96L42 1107 aa18.3■□□□□ 0.52
NXF1-203ENST00000526163 ATP1B4Q9UN42 357 aaPredicted RBP18.3■□□□□ 0.52
NXF1-203ENST00000526163 MAP3K4Q9Y6R4 1608 aa18.29■□□□□ 0.52
NXF1-203ENST00000526163 TSPOAP1O95153 1857 aa18.29■□□□□ 0.52
NXF1-203ENST00000526163 CDK11AQ9UQ88 783 aaPredicted RBP18.28■□□□□ 0.52
NXF1-203ENST00000526163 CFAP43Q8NDM7 1665 aa18.27■□□□□ 0.52
NXF1-203ENST00000526163 FYCO1Q9BQS8 1478 aa18.26■□□□□ 0.51
NXF1-203ENST00000526163 CDK13Q14004 1512 aaKnown RBP18.25■□□□□ 0.51
NXF1-203ENST00000526163 PCF11O94913 1555 aaKnown RBP18.25■□□□□ 0.51
NXF1-203ENST00000526163 CCDC18Q5T9S5 1454 aa18.24■□□□□ 0.51
NXF1-203ENST00000526163 TEX14Q8IWB6 1497 aa18.24■□□□□ 0.51
NXF1-203ENST00000526163 CD109Q6YHK3 1445 aa18.23■□□□□ 0.51
NXF1-203ENST00000526163 ABCA9Q8IUA7 1624 aa18.23■□□□□ 0.51
NXF1-203ENST00000526163 PPRC1Q5VV67 1664 aaKnown RBP18.22■□□□□ 0.51
NXF1-203ENST00000526163 MAGI3Q5TCQ9 1506 aa18.22■□□□□ 0.51
NXF1-203ENST00000526163 LRRIQ1Q96JM4 1722 aa18.2■□□□□ 0.5
NXF1-203ENST00000526163 TROQ12816 1431 aaPredicted RBP18.16■□□□□ 0.5
NXF1-203ENST00000526163 KDM6BO15054 1643 aa18.15■□□□□ 0.5
NXF1-203ENST00000526163 PHLDB1Q86UU1 1377 aa18.15■□□□□ 0.5
NXF1-203ENST00000526163 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.13■□□□□ 0.49
NXF1-203ENST00000526163 VPS8Q8N3P4 1428 aa18.13■□□□□ 0.49
NXF1-203ENST00000526163 KIF14Q15058 1648 aa18.11■□□□□ 0.49
NXF1-203ENST00000526163 NEO1Q92859 1461 aa18.09■□□□□ 0.49
NXF1-203ENST00000526163 TTC37Q6PGP7 1564 aa18.08■□□□□ 0.49
NXF1-203ENST00000526163 ARAP3Q8WWN8 1544 aa18.07■□□□□ 0.48
NXF1-203ENST00000526163 PLCH2O75038 1416 aa18.06■□□□□ 0.48
NXF1-203ENST00000526163 CFAP74Q9C0B2 1584 aa18.05■□□□□ 0.48
NXF1-203ENST00000526163 COL17A1Q9UMD9 1497 aaPredicted RBP18.05■□□□□ 0.48
NXF1-203ENST00000526163 MTUS2Q5JR59 1369 aa18.04■□□□□ 0.48
NXF1-203ENST00000526163 MYO5CQ9NQX4 1742 aa18.04■□□□□ 0.48
NXF1-203ENST00000526163 FANCAO15360 1455 aa18.04■□□□□ 0.48
NXF1-203ENST00000526163 MAP3K1Q13233 1512 aa18.02■□□□□ 0.47
NXF1-203ENST00000526163 KDM4FA0A1W2PPD8 638 aa18.01■□□□□ 0.47
NXF1-203ENST00000526163 EFCAB2Q5VUJ9 269 aa18.01■□□□□ 0.47
NXF1-203ENST00000526163 AKNAQ7Z591 1439 aa18■□□□□ 0.47
NXF1-203ENST00000526163 EHBP1L1Q8N3D4 1523 aa18■□□□□ 0.47
NXF1-203ENST00000526163 TIAM1Q13009 1591 aa18■□□□□ 0.47
NXF1-203ENST00000526163 APLP2Q06481 763 aa17.96■□□□□ 0.47
NXF1-203ENST00000526163 PREX2Q70Z35 1606 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms