RNA–Protein interactions for RNA: ENST00000525642.1

PKP3-203, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 495 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-203ENST00000525642 PRXQ9BXM0 1461 aa28.97■■■□□ 2.23
PKP3-203ENST00000525642 KIAA0586Q9BVV6 1533 aa28.94■■■□□ 2.22
PKP3-203ENST00000525642 CSRNP3Q8WYN3 585 aa28.9■■■□□ 2.22
PKP3-203ENST00000525642 ARAP1Q96P48 1450 aa28.87■■■□□ 2.21
PKP3-203ENST00000525642 JPH4Q96JJ6 628 aa28.85■■■□□ 2.21
PKP3-203ENST00000525642 ERCC6L2Q5T890 1561 aa28.82■■■□□ 2.2
PKP3-203ENST00000525642 PRG4Q92954 1404 aaPredicted RBP28.77■■■□□ 2.2
PKP3-203ENST00000525642 IQGAP2Q13576 1575 aa28.75■■■□□ 2.19
PKP3-203ENST00000525642 CYB5RLQ6IPT4 315 aa28.72■■■□□ 2.19
PKP3-203ENST00000525642 CTTNBP2Q8WZ74 1663 aa28.7■■■□□ 2.18
PKP3-203ENST00000525642 KIF21BO75037 1637 aa28.69■■■□□ 2.18
PKP3-203ENST00000525642 FAM9AQ8IZU1 332 aaPredicted RBP28.68■■■□□ 2.18
PKP3-203ENST00000525642 UGGT2Q9NYU1 1516 aa28.66■■■□□ 2.18
PKP3-203ENST00000525642 DISP1Q96F81 1524 aa28.59■■■□□ 2.17
PKP3-203ENST00000525642 CARMIL2Q6F5E8 1435 aa28.56■■■□□ 2.16
PKP3-203ENST00000525642 KIAA0556O60303 1618 aa28.5■■■□□ 2.15
PKP3-203ENST00000525642 TNIKQ9UKE5 1360 aa28.49■■■□□ 2.15
PKP3-203ENST00000525642 GOLGA3Q08378 1498 aa28.46■■■□□ 2.15
PKP3-203ENST00000525642 PTPRGP23470 1445 aa28.44■■■□□ 2.14
PKP3-203ENST00000525642 SAMD9Q5K651 1589 aa28.39■■■□□ 2.14
PKP3-203ENST00000525642 ADCY10Q96PN6 1610 aa28.35■■■□□ 2.13
PKP3-203ENST00000525642 UHRF1BP1LA0JNW5 1464 aa28.31■■■□□ 2.12
PKP3-203ENST00000525642 UBTFP17480 764 aaKnown RBP28.29■■■□□ 2.12
PKP3-203ENST00000525642 UACAQ9BZF9 1416 aa28.27■■■□□ 2.12
PKP3-203ENST00000525642 EFCAB5A4FU69 1503 aa28.24■■■□□ 2.11
PKP3-203ENST00000525642 ABCC2Q92887 1545 aa28.23■■■□□ 2.11
PKP3-203ENST00000525642 ABCA8O94911 1581 aa28.21■■■□□ 2.11
PKP3-203ENST00000525642 EHMT2Q96KQ7 1210 aa28.21■■■□□ 2.11
PKP3-203ENST00000525642 TTBK1Q5TCY1 1321 aaPredicted RBP28.19■■■□□ 2.1
PKP3-203ENST00000525642 MAPKBP1O60336 1514 aa28.18■■■□□ 2.1
PKP3-203ENST00000525642 PLB1Q6P1J6 1458 aa28.18■■■□□ 2.1
PKP3-203ENST00000525642 P3H3Q8IVL6 736 aa28.17■■■□□ 2.1
PKP3-203ENST00000525642 KDM5BQ9UGL1 1544 aa28.16■■■□□ 2.1
PKP3-203ENST00000525642 NPM1P06748 294 aaKnown RBP eCLIP28.14■■■□□ 2.1
PKP3-203ENST00000525642 ARHGAP35Q9NRY4 1499 aa28.14■■■□□ 2.09
PKP3-203ENST00000525642 FHOD3Q2V2M9 1422 aa28.13■■■□□ 2.09
PKP3-203ENST00000525642 RANGAP1P46060 587 aaPredicted RBP28.1■■■□□ 2.09
PKP3-203ENST00000525642 ZCCHC11Q5TAX3 1644 aaKnown RBP28.05■■■□□ 2.08
PKP3-203ENST00000525642 RAPGEF6Q8TEU7 1601 aa28.03■■■□□ 2.08
PKP3-203ENST00000525642 ABCC10Q5T3U5 1492 aa28.02■■■□□ 2.08
PKP3-203ENST00000525642 TRHP20396 242 aaPredicted RBP28.02■■■□□ 2.08
PKP3-203ENST00000525642 KIF13AQ9H1H9 1805 aa28■■■□□ 2.07
PKP3-203ENST00000525642 ASXL2Q76L83 1435 aa27.99■■■□□ 2.07
PKP3-203ENST00000525642 DIP2BQ9P265 1576 aa27.97■■■□□ 2.07
PKP3-203ENST00000525642 ATP10BO94823 1461 aa27.96■■■□□ 2.07
PKP3-203ENST00000525642 NUP153P49790 1475 aaKnown RBP27.96■■■□□ 2.07
PKP3-203ENST00000525642 FMN1Q68DA7 1419 aa27.96■■■□□ 2.07
PKP3-203ENST00000525642 CLIP1P30622 1438 aa27.94■■■□□ 2.06
PKP3-203ENST00000525642 LOC105371045A0A1W2PR82 267 aa27.93■■■□□ 2.06
PKP3-203ENST00000525642 GLI2P10070 1586 aa27.89■■■□□ 2.05
PKP3-203ENST00000525642 WDR7Q9Y4E6 1490 aa27.88■■■□□ 2.05
PKP3-203ENST00000525642 FAM69CQ0P6D2 419 aa27.86■■■□□ 2.05
PKP3-203ENST00000525642 EPRSP07814 1512 aaKnown RBP27.86■■■□□ 2.05
PKP3-203ENST00000525642 CEP162Q5TB80 1403 aa27.85■■■□□ 2.05
PKP3-203ENST00000525642 HECW1Q76N89 1606 aa27.81■■■□□ 2.04
PKP3-203ENST00000525642 CASKIN1Q8WXD9 1431 aa27.79■■■□□ 2.04
PKP3-203ENST00000525642 ARID3CA6NKF2 412 aa27.76■■■□□ 2.03
PKP3-203ENST00000525642 MAP3K4Q9Y6R4 1608 aa27.74■■■□□ 2.03
PKP3-203ENST00000525642 PCF11O94913 1555 aaKnown RBP27.73■■■□□ 2.03
PKP3-203ENST00000525642 LRRIQ1Q96JM4 1722 aa27.72■■■□□ 2.03
PKP3-203ENST00000525642 CDK13Q14004 1512 aaKnown RBP27.72■■■□□ 2.03
PKP3-203ENST00000525642 FYCO1Q9BQS8 1478 aa27.7■■■□□ 2.03
PKP3-203ENST00000525642 PPRC1Q5VV67 1664 aaKnown RBP27.69■■■□□ 2.02
PKP3-203ENST00000525642 CFAP43Q8NDM7 1665 aa27.66■■■□□ 2.02
PKP3-203ENST00000525642 PLEKHD1A6NEE1 506 aa27.66■■■□□ 2.02
PKP3-203ENST00000525642 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.66■■■□□ 2.02
PKP3-203ENST00000525642 HNRNPUL2Q1KMD3 747 aaKnown RBP27.66■■■□□ 2.02
PKP3-203ENST00000525642 KCNH8Q96L42 1107 aa27.65■■■□□ 2.02
PKP3-203ENST00000525642 ABCA9Q8IUA7 1624 aa27.64■■■□□ 2.02
PKP3-203ENST00000525642 CCDC18Q5T9S5 1454 aa27.64■■■□□ 2.01
PKP3-203ENST00000525642 TSPOAP1O95153 1857 aa27.63■■■□□ 2.01
PKP3-203ENST00000525642 ATP1B4Q9UN42 357 aaPredicted RBP27.61■■■□□ 2.01
PKP3-203ENST00000525642 MAGI3Q5TCQ9 1506 aa27.61■■■□□ 2.01
PKP3-203ENST00000525642 CD109Q6YHK3 1445 aa27.58■■■□□ 2.01
PKP3-203ENST00000525642 CDK11AQ9UQ88 783 aaPredicted RBP27.57■■■□□ 2
PKP3-203ENST00000525642 TROQ12816 1431 aaPredicted RBP27.54■■■□□ 2
PKP3-203ENST00000525642 TEX14Q8IWB6 1497 aa27.54■■■□□ 2
PKP3-203ENST00000525642 VPS8Q8N3P4 1428 aa27.54■■■□□ 2
PKP3-203ENST00000525642 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.53■■■□□ 2
PKP3-203ENST00000525642 TTC37Q6PGP7 1564 aa27.47■■□□□ 1.99
PKP3-203ENST00000525642 KIF14Q15058 1648 aa27.45■■□□□ 1.98
PKP3-203ENST00000525642 KDM6BO15054 1643 aa27.44■■□□□ 1.98
PKP3-203ENST00000525642 COL17A1Q9UMD9 1497 aaPredicted RBP27.42■■□□□ 1.98
PKP3-203ENST00000525642 PHLDB1Q86UU1 1377 aa27.4■■□□□ 1.98
PKP3-203ENST00000525642 NEO1Q92859 1461 aa27.39■■□□□ 1.98
PKP3-203ENST00000525642 PLCH2O75038 1416 aa27.39■■□□□ 1.97
PKP3-203ENST00000525642 ARAP3Q8WWN8 1544 aa27.38■■□□□ 1.97
PKP3-203ENST00000525642 MAP3K1Q13233 1512 aa27.37■■□□□ 1.97
PKP3-203ENST00000525642 TIAM1Q13009 1591 aa27.35■■□□□ 1.97
PKP3-203ENST00000525642 MYO5CQ9NQX4 1742 aa27.33■■□□□ 1.96
PKP3-203ENST00000525642 EHBP1L1Q8N3D4 1523 aa27.31■■□□□ 1.96
PKP3-203ENST00000525642 FANCAO15360 1455 aa27.31■■□□□ 1.96
PKP3-203ENST00000525642 MTUS2Q5JR59 1369 aa27.3■■□□□ 1.96
PKP3-203ENST00000525642 CFAP74Q9C0B2 1584 aa27.3■■□□□ 1.96
PKP3-203ENST00000525642 CDC42BPBQ9Y5S2 1711 aa27.27■■□□□ 1.96
PKP3-203ENST00000525642 AKNAQ7Z591 1439 aa27.26■■□□□ 1.95
PKP3-203ENST00000525642 PREX2Q70Z35 1606 aa27.25■■□□□ 1.95
PKP3-203ENST00000525642 CDC42BPAQ5VT25 1732 aa27.24■■□□□ 1.95
PKP3-203ENST00000525642 LRRC9Q6ZRR7 1453 aa27.24■■□□□ 1.95
PKP3-203ENST00000525642 GPATCH8Q9UKJ3 1502 aaKnown RBP27.22■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms