RNA–Protein interactions for RNA: ENST00000525633.1

ATPAF1-207, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 4

Gene ATPAF1, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-207ENST00000525633 CARMIL1Q5VZK9 1371 aa10.39□□□□□ -0.75
ATPAF1-207ENST00000525633 FHAD1B1AJZ9 1412 aa10.38□□□□□ -0.75
ATPAF1-207ENST00000525633 ADAMTS12P58397 1594 aa10.38□□□□□ -0.75
ATPAF1-207ENST00000525633 GRIN2AQ12879 1464 aa10.37□□□□□ -0.75
ATPAF1-207ENST00000525633 NUP160Q12769 1436 aa10.37□□□□□ -0.75
ATPAF1-207ENST00000525633 PRXQ9BXM0 1461 aa10.36□□□□□ -0.75
ATPAF1-207ENST00000525633 JPH4Q96JJ6 628 aa10.35□□□□□ -0.75
ATPAF1-207ENST00000525633 RAPGEF2Q9Y4G8 1499 aa10.35□□□□□ -0.75
ATPAF1-207ENST00000525633 GOLGA3Q08378 1498 aa10.34□□□□□ -0.75
ATPAF1-207ENST00000525633 UBTFP17480 764 aaKnown RBP10.33□□□□□ -0.76
ATPAF1-207ENST00000525633 CTTNBP2Q8WZ74 1663 aa10.32□□□□□ -0.76
ATPAF1-207ENST00000525633 ERCC6L2Q5T890 1561 aa10.3□□□□□ -0.76
ATPAF1-207ENST00000525633 PRG4Q92954 1404 aaPredicted RBP10.29□□□□□ -0.76
ATPAF1-207ENST00000525633 CEP170Q5SW79 1584 aa10.29□□□□□ -0.76
ATPAF1-207ENST00000525633 RANGAP1P46060 587 aaPredicted RBP10.26□□□□□ -0.77
ATPAF1-207ENST00000525633 TNIKQ9UKE5 1360 aa10.26□□□□□ -0.77
ATPAF1-207ENST00000525633 NPM1P06748 294 aaKnown RBP eCLIP10.24□□□□□ -0.77
ATPAF1-207ENST00000525633 IQGAP2Q13576 1575 aa10.22□□□□□ -0.77
ATPAF1-207ENST00000525633 SHROOM2Q13796 1616 aa10.22□□□□□ -0.77
ATPAF1-207ENST00000525633 AEBP2Q6ZN18 517 aaPredicted RBP10.21□□□□□ -0.77
ATPAF1-207ENST00000525633 FAM69CQ0P6D2 419 aa10.2□□□□□ -0.78
ATPAF1-207ENST00000525633 KIAA0586Q9BVV6 1533 aa10.2□□□□□ -0.78
ATPAF1-207ENST00000525633 CEP162Q5TB80 1403 aa10.18□□□□□ -0.78
ATPAF1-207ENST00000525633 CLIP1P30622 1438 aa10.16□□□□□ -0.78
ATPAF1-207ENST00000525633 PTPRGP23470 1445 aa10.16□□□□□ -0.78
ATPAF1-207ENST00000525633 P3H3Q8IVL6 736 aa10.15□□□□□ -0.78
ATPAF1-207ENST00000525633 TTBK1Q5TCY1 1321 aaPredicted RBP10.14□□□□□ -0.79
ATPAF1-207ENST00000525633 UGGT2Q9NYU1 1516 aa10.14□□□□□ -0.79
ATPAF1-207ENST00000525633 ABCC10Q5T3U5 1492 aa10.14□□□□□ -0.79
ATPAF1-207ENST00000525633 SAMD9Q5K651 1589 aa10.14□□□□□ -0.79
ATPAF1-207ENST00000525633 EFCAB5A4FU69 1503 aa10.12□□□□□ -0.79
ATPAF1-207ENST00000525633 ARHGAP35Q9NRY4 1499 aa10.12□□□□□ -0.79
ATPAF1-207ENST00000525633 CARMIL2Q6F5E8 1435 aa10.11□□□□□ -0.79
ATPAF1-207ENST00000525633 KIAA0556O60303 1618 aa10.11□□□□□ -0.79
ATPAF1-207ENST00000525633 DISP1Q96F81 1524 aa10.1□□□□□ -0.79
ATPAF1-207ENST00000525633 FHOD3Q2V2M9 1422 aa10.09□□□□□ -0.79
ATPAF1-207ENST00000525633 MAPKBP1O60336 1514 aa10.09□□□□□ -0.79
ATPAF1-207ENST00000525633 ADCY10Q96PN6 1610 aa10.06□□□□□ -0.8
ATPAF1-207ENST00000525633 UACAQ9BZF9 1416 aa10.05□□□□□ -0.8
ATPAF1-207ENST00000525633 ABCC2Q92887 1545 aa10.04□□□□□ -0.8
ATPAF1-207ENST00000525633 ASXL2Q76L83 1435 aa10.03□□□□□ -0.8
ATPAF1-207ENST00000525633 ATP1B4Q9UN42 357 aaPredicted RBP10.03□□□□□ -0.8
ATPAF1-207ENST00000525633 UHRF1BP1LA0JNW5 1464 aa10.03□□□□□ -0.8
ATPAF1-207ENST00000525633 PLB1Q6P1J6 1458 aa10.03□□□□□ -0.8
ATPAF1-207ENST00000525633 FMN1Q68DA7 1419 aa10.02□□□□□ -0.81
ATPAF1-207ENST00000525633 VPS8Q8N3P4 1428 aa10.02□□□□□ -0.81
ATPAF1-207ENST00000525633 KDM4FA0A1W2PPD8 638 aa10.02□□□□□ -0.81
ATPAF1-207ENST00000525633 LRRIQ1Q96JM4 1722 aa10.02□□□□□ -0.81
ATPAF1-207ENST00000525633 PCF11O94913 1555 aaKnown RBP10.01□□□□□ -0.81
ATPAF1-207ENST00000525633 DIP2BQ9P265 1576 aa10.01□□□□□ -0.81
ATPAF1-207ENST00000525633 RAPGEF6Q8TEU7 1601 aa10□□□□□ -0.81
ATPAF1-207ENST00000525633 KIF13AQ9H1H9 1805 aa9.99□□□□□ -0.81
ATPAF1-207ENST00000525633 CASKIN1Q8WXD9 1431 aa9.99□□□□□ -0.81
ATPAF1-207ENST00000525633 FYCO1Q9BQS8 1478 aa9.98□□□□□ -0.81
ATPAF1-207ENST00000525633 KDM5BQ9UGL1 1544 aa9.97□□□□□ -0.81
ATPAF1-207ENST00000525633 ABCA8O94911 1581 aa9.97□□□□□ -0.81
ATPAF1-207ENST00000525633 HECW1Q76N89 1606 aa9.97□□□□□ -0.81
ATPAF1-207ENST00000525633 ARID3CA6NKF2 412 aa9.97□□□□□ -0.81
ATPAF1-207ENST00000525633 APLP2Q06481 763 aa9.97□□□□□ -0.81
ATPAF1-207ENST00000525633 PPARGC1BQ86YN6 1023 aaKnown RBP9.95□□□□□ -0.82
ATPAF1-207ENST00000525633 KCNH8Q96L42 1107 aa9.95□□□□□ -0.82
ATPAF1-207ENST00000525633 EPRSP07814 1512 aaKnown RBP9.95□□□□□ -0.82
ATPAF1-207ENST00000525633 GLI2P10070 1586 aa9.95□□□□□ -0.82
ATPAF1-207ENST00000525633 CFAP43Q8NDM7 1665 aa9.95□□□□□ -0.82
ATPAF1-207ENST00000525633 COL17A1Q9UMD9 1497 aaPredicted RBP9.94□□□□□ -0.82
ATPAF1-207ENST00000525633 NUP153P49790 1475 aaKnown RBP9.93□□□□□ -0.82
ATPAF1-207ENST00000525633 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.93□□□□□ -0.82
ATPAF1-207ENST00000525633 HNRNPUL2Q1KMD3 747 aaKnown RBP9.93□□□□□ -0.82
ATPAF1-207ENST00000525633 KDM6BO15054 1643 aa9.93□□□□□ -0.82
ATPAF1-207ENST00000525633 TIAM1Q13009 1591 aa9.92□□□□□ -0.82
ATPAF1-207ENST00000525633 CDK13Q14004 1512 aaKnown RBP9.92□□□□□ -0.82
ATPAF1-207ENST00000525633 ZCCHC11Q5TAX3 1644 aaKnown RBP9.92□□□□□ -0.82
ATPAF1-207ENST00000525633 CCDC18Q5T9S5 1454 aa9.91□□□□□ -0.82
ATPAF1-207ENST00000525633 ATP10BO94823 1461 aa9.9□□□□□ -0.83
ATPAF1-207ENST00000525633 WDR7Q9Y4E6 1490 aa9.9□□□□□ -0.83
ATPAF1-207ENST00000525633 MAP3K1Q13233 1512 aa9.89□□□□□ -0.83
ATPAF1-207ENST00000525633 TEX14Q8IWB6 1497 aa9.89□□□□□ -0.83
ATPAF1-207ENST00000525633 CD109Q6YHK3 1445 aa9.89□□□□□ -0.83
ATPAF1-207ENST00000525633 KANK4Q5T7N3 995 aaPredicted RBP9.88□□□□□ -0.83
ATPAF1-207ENST00000525633 CDK11AQ9UQ88 783 aaPredicted RBP9.86□□□□□ -0.83
ATPAF1-207ENST00000525633 MAGI3Q5TCQ9 1506 aa9.86□□□□□ -0.83
ATPAF1-207ENST00000525633 MTUS2Q5JR59 1369 aa9.86□□□□□ -0.83
ATPAF1-207ENST00000525633 LRRC9Q6ZRR7 1453 aa9.85□□□□□ -0.83
ATPAF1-207ENST00000525633 SUPT6HQ7KZ85 1726 aaKnown RBP9.85□□□□□ -0.83
ATPAF1-207ENST00000525633 PLEKHD1A6NEE1 506 aa9.85□□□□□ -0.83
ATPAF1-207ENST00000525633 TSPOAP1O95153 1857 aa9.85□□□□□ -0.83
ATPAF1-207ENST00000525633 EHBP1L1Q8N3D4 1523 aa9.84□□□□□ -0.83
ATPAF1-207ENST00000525633 ADGRL1O94910 1474 aa9.83□□□□□ -0.84
ATPAF1-207ENST00000525633 PPRC1Q5VV67 1664 aaKnown RBP9.83□□□□□ -0.84
ATPAF1-207ENST00000525633 KIF14Q15058 1648 aa9.82□□□□□ -0.84
ATPAF1-207ENST00000525633 MAP3K4Q9Y6R4 1608 aa9.82□□□□□ -0.84
ATPAF1-207ENST00000525633 TROQ12816 1431 aaPredicted RBP9.82□□□□□ -0.84
ATPAF1-207ENST00000525633 PHLDB1Q86UU1 1377 aa9.81□□□□□ -0.84
ATPAF1-207ENST00000525633 NCOA2Q15596 1464 aa9.79□□□□□ -0.84
ATPAF1-207ENST00000525633 CDC42BPAQ5VT25 1732 aa9.79□□□□□ -0.84
ATPAF1-207ENST00000525633 RAPGEF3O95398 923 aa9.79□□□□□ -0.84
ATPAF1-207ENST00000525633 MYO5CQ9NQX4 1742 aa9.78□□□□□ -0.84
ATPAF1-207ENST00000525633 ARAP3Q8WWN8 1544 aa9.77□□□□□ -0.84
ATPAF1-207ENST00000525633 ITSN2Q9NZM3 1697 aa9.77□□□□□ -0.85
ATPAF1-207ENST00000525633 CDC42BPBQ9Y5S2 1711 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms