RNA–Protein interactions for RNA: ENST00000525036.1

RB1-205, Transcript of RB transcriptional corepressor 1, humanhuman

TSL 3

Gene RB1, Length 1,490 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RB1-205ENST00000525036 KIAA0586Q9BVV6 1533 aa25.72■■□□□ 1.71
RB1-205ENST00000525036 JPH4Q96JJ6 628 aa25.68■■□□□ 1.7
RB1-205ENST00000525036 GOLGA3Q08378 1498 aa25.63■■□□□ 1.69
RB1-205ENST00000525036 ERCC6L2Q5T890 1561 aa25.62■■□□□ 1.69
RB1-205ENST00000525036 UBTFP17480 764 aaKnown RBP25.61■■□□□ 1.69
RB1-205ENST00000525036 IQGAP2Q13576 1575 aa25.61■■□□□ 1.69
RB1-205ENST00000525036 SHROOM2Q13796 1616 aa25.61■■□□□ 1.69
RB1-205ENST00000525036 ARHGEF11O15085 1522 aa25.61■■□□□ 1.69
RB1-205ENST00000525036 LOC105371045A0A1W2PR82 267 aa25.59■■□□□ 1.69
RB1-205ENST00000525036 PRG4Q92954 1404 aaPredicted RBP25.58■■□□□ 1.69
RB1-205ENST00000525036 CTTNBP2Q8WZ74 1663 aa25.58■■□□□ 1.68
RB1-205ENST00000525036 RIMBP3CA6NJZ7 1639 aa25.57■■□□□ 1.68
RB1-205ENST00000525036 RIMBP3BA6NNM3 1639 aa25.57■■□□□ 1.68
RB1-205ENST00000525036 RIMBP3Q9UFD9 1639 aa25.57■■□□□ 1.68
RB1-205ENST00000525036 RANGAP1P46060 587 aaPredicted RBP25.54■■□□□ 1.68
RB1-205ENST00000525036 UGGT2Q9NYU1 1516 aa25.5■■□□□ 1.67
RB1-205ENST00000525036 DISP1Q96F81 1524 aa25.48■■□□□ 1.67
RB1-205ENST00000525036 ARAP1Q96P48 1450 aa25.46■■□□□ 1.67
RB1-205ENST00000525036 CYB5RLQ6IPT4 315 aa25.43■■□□□ 1.66
RB1-205ENST00000525036 P3H3Q8IVL6 736 aa25.43■■□□□ 1.66
RB1-205ENST00000525036 TTBK1Q5TCY1 1321 aaPredicted RBP25.41■■□□□ 1.66
RB1-205ENST00000525036 TNIKQ9UKE5 1360 aa25.4■■□□□ 1.66
RB1-205ENST00000525036 CARMIL2Q6F5E8 1435 aa25.39■■□□□ 1.66
RB1-205ENST00000525036 KIAA0556O60303 1618 aa25.37■■□□□ 1.65
RB1-205ENST00000525036 SAMD9Q5K651 1589 aa25.32■■□□□ 1.64
RB1-205ENST00000525036 PTPRGP23470 1445 aa25.31■■□□□ 1.64
RB1-205ENST00000525036 FHOD3Q2V2M9 1422 aa25.28■■□□□ 1.64
RB1-205ENST00000525036 ARHGAP35Q9NRY4 1499 aa25.28■■□□□ 1.64
RB1-205ENST00000525036 EFCAB5A4FU69 1503 aa25.22■■□□□ 1.63
RB1-205ENST00000525036 CLIP1P30622 1438 aa25.22■■□□□ 1.63
RB1-205ENST00000525036 CEP162Q5TB80 1403 aa25.21■■□□□ 1.63
RB1-205ENST00000525036 PLB1Q6P1J6 1458 aa25.17■■□□□ 1.62
RB1-205ENST00000525036 UACAQ9BZF9 1416 aa25.14■■□□□ 1.61
RB1-205ENST00000525036 ADCY10Q96PN6 1610 aa25.13■■□□□ 1.61
RB1-205ENST00000525036 ABCA8O94911 1581 aa25.09■■□□□ 1.61
RB1-205ENST00000525036 ARID3CA6NKF2 412 aa25.07■■□□□ 1.6
RB1-205ENST00000525036 UHRF1BP1LA0JNW5 1464 aa25.06■■□□□ 1.6
RB1-205ENST00000525036 ABCC2Q92887 1545 aa25.06■■□□□ 1.6
RB1-205ENST00000525036 FMN1Q68DA7 1419 aa25.01■■□□□ 1.59
RB1-205ENST00000525036 RAPGEF6Q8TEU7 1601 aa25■■□□□ 1.59
RB1-205ENST00000525036 ATP1B4Q9UN42 357 aaPredicted RBP24.98■■□□□ 1.59
RB1-205ENST00000525036 NUP153P49790 1475 aaKnown RBP24.98■■□□□ 1.59
RB1-205ENST00000525036 NPM1P06748 294 aaKnown RBP eCLIP24.96■■□□□ 1.59
RB1-205ENST00000525036 KDM5BQ9UGL1 1544 aa24.96■■□□□ 1.59
RB1-205ENST00000525036 ATP10BO94823 1461 aa24.94■■□□□ 1.58
RB1-205ENST00000525036 PCF11O94913 1555 aaKnown RBP24.92■■□□□ 1.58
RB1-205ENST00000525036 CASKIN1Q8WXD9 1431 aa24.91■■□□□ 1.58
RB1-205ENST00000525036 ZCCHC11Q5TAX3 1644 aaKnown RBP24.91■■□□□ 1.58
RB1-205ENST00000525036 CDK13Q14004 1512 aaKnown RBP24.87■■□□□ 1.57
RB1-205ENST00000525036 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.86■■□□□ 1.57
RB1-205ENST00000525036 HNRNPUL2Q1KMD3 747 aaKnown RBP24.86■■□□□ 1.57
RB1-205ENST00000525036 ASXL2Q76L83 1435 aa24.85■■□□□ 1.57
RB1-205ENST00000525036 VPS8Q8N3P4 1428 aa24.85■■□□□ 1.57
RB1-205ENST00000525036 EPRSP07814 1512 aaKnown RBP24.84■■□□□ 1.57
RB1-205ENST00000525036 HECW1Q76N89 1606 aa24.84■■□□□ 1.57
RB1-205ENST00000525036 LRRIQ1Q96JM4 1722 aa24.83■■□□□ 1.57
RB1-205ENST00000525036 MAPKBP1O60336 1514 aa24.83■■□□□ 1.57
RB1-205ENST00000525036 FYCO1Q9BQS8 1478 aa24.83■■□□□ 1.57
RB1-205ENST00000525036 TRHP20396 242 aaPredicted RBP24.76■■□□□ 1.55
RB1-205ENST00000525036 KCNH8Q96L42 1107 aa24.76■■□□□ 1.55
RB1-205ENST00000525036 WDR7Q9Y4E6 1490 aa24.74■■□□□ 1.55
RB1-205ENST00000525036 ABCC10Q5T3U5 1492 aa24.72■■□□□ 1.55
RB1-205ENST00000525036 PLEKHD1A6NEE1 506 aa24.71■■□□□ 1.55
RB1-205ENST00000525036 FAM69CQ0P6D2 419 aa24.71■■□□□ 1.55
RB1-205ENST00000525036 CCDC18Q5T9S5 1454 aa24.7■■□□□ 1.54
RB1-205ENST00000525036 MAGI3Q5TCQ9 1506 aa24.69■■□□□ 1.54
RB1-205ENST00000525036 DIP2BQ9P265 1576 aa24.67■■□□□ 1.54
RB1-205ENST00000525036 KIF13AQ9H1H9 1805 aa24.64■■□□□ 1.53
RB1-205ENST00000525036 CDK11AQ9UQ88 783 aaPredicted RBP24.63■■□□□ 1.53
RB1-205ENST00000525036 KANK4Q5T7N3 995 aaPredicted RBP24.62■■□□□ 1.53
RB1-205ENST00000525036 TROQ12816 1431 aaPredicted RBP24.61■■□□□ 1.53
RB1-205ENST00000525036 TIAM1Q13009 1591 aa24.6■■□□□ 1.53
RB1-205ENST00000525036 GLI2P10070 1586 aa24.58■■□□□ 1.53
RB1-205ENST00000525036 CFAP43Q8NDM7 1665 aa24.57■■□□□ 1.52
RB1-205ENST00000525036 KIF14Q15058 1648 aa24.57■■□□□ 1.52
RB1-205ENST00000525036 MTUS2Q5JR59 1369 aa24.54■■□□□ 1.52
RB1-205ENST00000525036 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.54■■□□□ 1.52
RB1-205ENST00000525036 APLP2Q06481 763 aa24.52■■□□□ 1.52
RB1-205ENST00000525036 MAP3K1Q13233 1512 aa24.52■■□□□ 1.52
RB1-205ENST00000525036 LRRC9Q6ZRR7 1453 aa24.52■■□□□ 1.52
RB1-205ENST00000525036 TTC37Q6PGP7 1564 aa24.51■■□□□ 1.51
RB1-205ENST00000525036 MAP3K4Q9Y6R4 1608 aa24.5■■□□□ 1.51
RB1-205ENST00000525036 CD109Q6YHK3 1445 aa24.5■■□□□ 1.51
RB1-205ENST00000525036 ABCA9Q8IUA7 1624 aa24.5■■□□□ 1.51
RB1-205ENST00000525036 PPARGC1BQ86YN6 1023 aaKnown RBP24.49■■□□□ 1.51
RB1-205ENST00000525036 TSPOAP1O95153 1857 aa24.47■■□□□ 1.51
RB1-205ENST00000525036 EHBP1L1Q8N3D4 1523 aa24.46■■□□□ 1.51
RB1-205ENST00000525036 PPRC1Q5VV67 1664 aaKnown RBP24.45■■□□□ 1.5
RB1-205ENST00000525036 NCOA2Q15596 1464 aa24.4■■□□□ 1.5
RB1-205ENST00000525036 PLCH2O75038 1416 aa24.38■■□□□ 1.49
RB1-205ENST00000525036 GPATCH8Q9UKJ3 1502 aaKnown RBP24.36■■□□□ 1.49
RB1-205ENST00000525036 CCNB3Q8WWL7 1395 aa24.34■■□□□ 1.49
RB1-205ENST00000525036 SUPT6HQ7KZ85 1726 aaKnown RBP24.34■■□□□ 1.49
RB1-205ENST00000525036 CDC42BPAQ5VT25 1732 aa24.32■■□□□ 1.48
RB1-205ENST00000525036 MYO5CQ9NQX4 1742 aa24.31■■□□□ 1.48
RB1-205ENST00000525036 TEX14Q8IWB6 1497 aa24.31■■□□□ 1.48
RB1-205ENST00000525036 FANCAO15360 1455 aa24.3■■□□□ 1.48
RB1-205ENST00000525036 COL17A1Q9UMD9 1497 aaPredicted RBP24.3■■□□□ 1.48
RB1-205ENST00000525036 CDC42BPBQ9Y5S2 1711 aa24.3■■□□□ 1.48
RB1-205ENST00000525036 PHLDB1Q86UU1 1377 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms