RNA–Protein interactions for RNA: ENST00000525004.5

UBXN1-205, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 482 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-205ENST00000525004 CTTNBP2Q8WZ74 1663 aa22.99■■□□□ 1.27
UBXN1-205ENST00000525004 SHROOM2Q13796 1616 aa22.94■■□□□ 1.26
UBXN1-205ENST00000525004 IQGAP2Q13576 1575 aa22.93■■□□□ 1.26
UBXN1-205ENST00000525004 JPH4Q96JJ6 628 aa22.9■■□□□ 1.26
UBXN1-205ENST00000525004 UBTFP17480 764 aaKnown RBP22.88■■□□□ 1.25
UBXN1-205ENST00000525004 TNIKQ9UKE5 1360 aa22.87■■□□□ 1.25
UBXN1-205ENST00000525004 UGGT2Q9NYU1 1516 aa22.86■■□□□ 1.25
UBXN1-205ENST00000525004 LOC105371045A0A1W2PR82 267 aa22.85■■□□□ 1.25
UBXN1-205ENST00000525004 DNAJC5Q9H3Z4 198 aa22.83■■□□□ 1.25
UBXN1-205ENST00000525004 EHMT2Q96KQ7 1210 aa22.82■■□□□ 1.24
UBXN1-205ENST00000525004 PRG4Q92954 1404 aaPredicted RBP22.78■■□□□ 1.24
UBXN1-205ENST00000525004 DISP1Q96F81 1524 aa22.77■■□□□ 1.24
UBXN1-205ENST00000525004 ARHGEF11O15085 1522 aa22.75■■□□□ 1.23
UBXN1-205ENST00000525004 SAMD9Q5K651 1589 aa22.74■■□□□ 1.23
UBXN1-205ENST00000525004 ERCC6L2Q5T890 1561 aa22.74■■□□□ 1.23
UBXN1-205ENST00000525004 CARMIL2Q6F5E8 1435 aa22.72■■□□□ 1.23
UBXN1-205ENST00000525004 RIMBP3CA6NJZ7 1639 aa22.71■■□□□ 1.23
UBXN1-205ENST00000525004 RIMBP3BA6NNM3 1639 aa22.71■■□□□ 1.23
UBXN1-205ENST00000525004 KIAA0556O60303 1618 aa22.71■■□□□ 1.23
UBXN1-205ENST00000525004 RIMBP3Q9UFD9 1639 aa22.71■■□□□ 1.23
UBXN1-205ENST00000525004 EFCAB5A4FU69 1503 aa22.69■■□□□ 1.22
UBXN1-205ENST00000525004 ARHGAP35Q9NRY4 1499 aa22.66■■□□□ 1.22
UBXN1-205ENST00000525004 CLIP1P30622 1438 aa22.62■■□□□ 1.21
UBXN1-205ENST00000525004 CEP162Q5TB80 1403 aa22.62■■□□□ 1.21
UBXN1-205ENST00000525004 ARAP1Q96P48 1450 aa22.6■■□□□ 1.21
UBXN1-205ENST00000525004 RANGAP1P46060 587 aaPredicted RBP22.59■■□□□ 1.21
UBXN1-205ENST00000525004 PTPRGP23470 1445 aa22.57■■□□□ 1.2
UBXN1-205ENST00000525004 P3H3Q8IVL6 736 aa22.56■■□□□ 1.2
UBXN1-205ENST00000525004 FHOD3Q2V2M9 1422 aa22.55■■□□□ 1.2
UBXN1-205ENST00000525004 CYB5RLQ6IPT4 315 aa22.48■■□□□ 1.19
UBXN1-205ENST00000525004 FMN1Q68DA7 1419 aa22.47■■□□□ 1.19
UBXN1-205ENST00000525004 ABCA8O94911 1581 aa22.46■■□□□ 1.19
UBXN1-205ENST00000525004 UHRF1BP1LA0JNW5 1464 aa22.46■■□□□ 1.19
UBXN1-205ENST00000525004 UACAQ9BZF9 1416 aa22.45■■□□□ 1.18
UBXN1-205ENST00000525004 PLB1Q6P1J6 1458 aa22.42■■□□□ 1.18
UBXN1-205ENST00000525004 ABCC2Q92887 1545 aa22.41■■□□□ 1.18
UBXN1-205ENST00000525004 TTBK1Q5TCY1 1321 aaPredicted RBP22.4■■□□□ 1.18
UBXN1-205ENST00000525004 RAPGEF6Q8TEU7 1601 aa22.4■■□□□ 1.18
UBXN1-205ENST00000525004 ADCY10Q96PN6 1610 aa22.4■■□□□ 1.18
UBXN1-205ENST00000525004 CASKIN1Q8WXD9 1431 aa22.36■■□□□ 1.17
UBXN1-205ENST00000525004 VPS8Q8N3P4 1428 aa22.34■■□□□ 1.17
UBXN1-205ENST00000525004 KDM5BQ9UGL1 1544 aa22.34■■□□□ 1.17
UBXN1-205ENST00000525004 NUP153P49790 1475 aaKnown RBP22.33■■□□□ 1.16
UBXN1-205ENST00000525004 FYCO1Q9BQS8 1478 aa22.31■■□□□ 1.16
UBXN1-205ENST00000525004 PCF11O94913 1555 aaKnown RBP22.3■■□□□ 1.16
UBXN1-205ENST00000525004 HECW1Q76N89 1606 aa22.29■■□□□ 1.16
UBXN1-205ENST00000525004 LRRIQ1Q96JM4 1722 aa22.28■■□□□ 1.16
UBXN1-205ENST00000525004 ATP10BO94823 1461 aa22.28■■□□□ 1.16
UBXN1-205ENST00000525004 ZCCHC11Q5TAX3 1644 aaKnown RBP22.25■■□□□ 1.15
UBXN1-205ENST00000525004 EPRSP07814 1512 aaKnown RBP22.25■■□□□ 1.15
UBXN1-205ENST00000525004 NPM1P06748 294 aaKnown RBP eCLIP22.22■■□□□ 1.15
UBXN1-205ENST00000525004 CCDC18Q5T9S5 1454 aa22.2■■□□□ 1.14
UBXN1-205ENST00000525004 MAPKBP1O60336 1514 aa22.2■■□□□ 1.14
UBXN1-205ENST00000525004 MAP3K1Q13233 1512 aa22.17■■□□□ 1.14
UBXN1-205ENST00000525004 ATP1B4Q9UN42 357 aaPredicted RBP22.17■■□□□ 1.14
UBXN1-205ENST00000525004 CDK13Q14004 1512 aaKnown RBP22.16■■□□□ 1.14
UBXN1-205ENST00000525004 ASXL2Q76L83 1435 aa22.13■■□□□ 1.13
UBXN1-205ENST00000525004 ARID3CA6NKF2 412 aa22.12■■□□□ 1.13
UBXN1-205ENST00000525004 CFAP43Q8NDM7 1665 aa22.11■■□□□ 1.13
UBXN1-205ENST00000525004 TIAM1Q13009 1591 aa22.1■■□□□ 1.13
UBXN1-205ENST00000525004 CDK11AQ9UQ88 783 aaPredicted RBP22.1■■□□□ 1.13
UBXN1-205ENST00000525004 WDR7Q9Y4E6 1490 aa22.09■■□□□ 1.13
UBXN1-205ENST00000525004 PLEKHD1A6NEE1 506 aa22.09■■□□□ 1.13
UBXN1-205ENST00000525004 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.08■■□□□ 1.13
UBXN1-205ENST00000525004 HNRNPUL2Q1KMD3 747 aaKnown RBP22.08■■□□□ 1.13
UBXN1-205ENST00000525004 MAGI3Q5TCQ9 1506 aa22.06■■□□□ 1.12
UBXN1-205ENST00000525004 TROQ12816 1431 aaPredicted RBP22.05■■□□□ 1.12
UBXN1-205ENST00000525004 ABCC10Q5T3U5 1492 aa22.03■■□□□ 1.12
UBXN1-205ENST00000525004 GLI2P10070 1586 aa22.01■■□□□ 1.11
UBXN1-205ENST00000525004 APLP2Q06481 763 aa22.01■■□□□ 1.11
UBXN1-205ENST00000525004 LRRC9Q6ZRR7 1453 aa22.01■■□□□ 1.11
UBXN1-205ENST00000525004 KIF13AQ9H1H9 1805 aa22■■□□□ 1.11
UBXN1-205ENST00000525004 DIP2BQ9P265 1576 aa21.99■■□□□ 1.11
UBXN1-205ENST00000525004 KANK4Q5T7N3 995 aaPredicted RBP21.99■■□□□ 1.11
UBXN1-205ENST00000525004 EHBP1L1Q8N3D4 1523 aa21.98■■□□□ 1.11
UBXN1-205ENST00000525004 MTUS2Q5JR59 1369 aa21.97■■□□□ 1.11
UBXN1-205ENST00000525004 KCNH8Q96L42 1107 aa21.95■■□□□ 1.1
UBXN1-205ENST00000525004 ABCA9Q8IUA7 1624 aa21.95■■□□□ 1.1
UBXN1-205ENST00000525004 KIF14Q15058 1648 aa21.94■■□□□ 1.1
UBXN1-205ENST00000525004 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.93■■□□□ 1.1
UBXN1-205ENST00000525004 FAM69CQ0P6D2 419 aa21.91■■□□□ 1.1
UBXN1-205ENST00000525004 MAP3K4Q9Y6R4 1608 aa21.91■■□□□ 1.1
UBXN1-205ENST00000525004 SUPT6HQ7KZ85 1726 aaKnown RBP21.9■■□□□ 1.1
UBXN1-205ENST00000525004 TTC37Q6PGP7 1564 aa21.87■■□□□ 1.09
UBXN1-205ENST00000525004 NCOA2Q15596 1464 aa21.85■■□□□ 1.09
UBXN1-205ENST00000525004 CD109Q6YHK3 1445 aa21.84■■□□□ 1.09
UBXN1-205ENST00000525004 ARAP3Q8WWN8 1544 aa21.83■■□□□ 1.09
UBXN1-205ENST00000525004 CDC42BPAQ5VT25 1732 aa21.83■■□□□ 1.08
UBXN1-205ENST00000525004 PLCH2O75038 1416 aa21.82■■□□□ 1.08
UBXN1-205ENST00000525004 TRHP20396 242 aaPredicted RBP21.82■■□□□ 1.08
UBXN1-205ENST00000525004 MYO5CQ9NQX4 1742 aa21.82■■□□□ 1.08
UBXN1-205ENST00000525004 PPRC1Q5VV67 1664 aaKnown RBP21.82■■□□□ 1.08
UBXN1-205ENST00000525004 GPATCH8Q9UKJ3 1502 aaKnown RBP21.81■■□□□ 1.08
UBXN1-205ENST00000525004 CDC42BPBQ9Y5S2 1711 aa21.8■■□□□ 1.08
UBXN1-205ENST00000525004 PREX2Q70Z35 1606 aa21.78■■□□□ 1.08
UBXN1-205ENST00000525004 TSPOAP1O95153 1857 aa21.78■■□□□ 1.08
UBXN1-205ENST00000525004 CCNB3Q8WWL7 1395 aa21.77■■□□□ 1.08
UBXN1-205ENST00000525004 ITSN2Q9NZM3 1697 aa21.75■■□□□ 1.07
UBXN1-205ENST00000525004 PHLDB1Q86UU1 1377 aa21.74■■□□□ 1.07
UBXN1-205ENST00000525004 MYOM3Q5VTT5 1437 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms