RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 TNIKQ9UKE5 1360 aa25.64■■□□□ 1.69
TSPAN4-213ENST00000524895 NUP160Q12769 1436 aa25.63■■□□□ 1.69
TSPAN4-213ENST00000524895 KIAA0586Q9BVV6 1533 aa25.56■■□□□ 1.68
TSPAN4-213ENST00000524895 IQGAP2Q13576 1575 aa25.56■■□□□ 1.68
TSPAN4-213ENST00000524895 CLASP1Q7Z460 1538 aa25.47■■□□□ 1.67
TSPAN4-213ENST00000524895 CEP162Q5TB80 1403 aa25.47■■□□□ 1.67
TSPAN4-213ENST00000524895 RANGAP1P46060 587 aaPredicted RBP25.46■■□□□ 1.67
TSPAN4-213ENST00000524895 OSCARQ8IYS5 282 aa25.45■■□□□ 1.66
TSPAN4-213ENST00000524895 CLIP1P30622 1438 aa25.42■■□□□ 1.66
TSPAN4-213ENST00000524895 UGGT2Q9NYU1 1516 aa25.41■■□□□ 1.66
TSPAN4-213ENST00000524895 EFCAB5A4FU69 1503 aa25.38■■□□□ 1.65
TSPAN4-213ENST00000524895 SHROOM2Q13796 1616 aa25.37■■□□□ 1.65
TSPAN4-213ENST00000524895 SAMD9Q5K651 1589 aa25.35■■□□□ 1.65
TSPAN4-213ENST00000524895 JPH4Q96JJ6 628 aa25.35■■□□□ 1.65
TSPAN4-213ENST00000524895 ARHGAP35Q9NRY4 1499 aa25.33■■□□□ 1.65
TSPAN4-213ENST00000524895 KIAA0556O60303 1618 aa25.3■■□□□ 1.64
TSPAN4-213ENST00000524895 DISP1Q96F81 1524 aa25.29■■□□□ 1.64
TSPAN4-213ENST00000524895 CARMIL2Q6F5E8 1435 aa25.29■■□□□ 1.64
TSPAN4-213ENST00000524895 PRG4Q92954 1404 aaPredicted RBP25.29■■□□□ 1.64
TSPAN4-213ENST00000524895 ARAP1Q96P48 1450 aa25.24■■□□□ 1.63
TSPAN4-213ENST00000524895 FHOD3Q2V2M9 1422 aa25.24■■□□□ 1.63
TSPAN4-213ENST00000524895 P3H3Q8IVL6 736 aa25.24■■□□□ 1.63
TSPAN4-213ENST00000524895 ERCC6L2Q5T890 1561 aa25.19■■□□□ 1.62
TSPAN4-213ENST00000524895 FMN1Q68DA7 1419 aa25.12■■□□□ 1.61
TSPAN4-213ENST00000524895 VPS8Q8N3P4 1428 aa25.12■■□□□ 1.61
TSPAN4-213ENST00000524895 TTBK1Q5TCY1 1321 aaPredicted RBP25.1■■□□□ 1.61
TSPAN4-213ENST00000524895 ARHGEF11O15085 1522 aa25.08■■□□□ 1.61
TSPAN4-213ENST00000524895 PTPRGP23470 1445 aa25.06■■□□□ 1.6
TSPAN4-213ENST00000524895 PCF11O94913 1555 aaKnown RBP25.04■■□□□ 1.6
TSPAN4-213ENST00000524895 RIMBP3CA6NJZ7 1639 aa25.01■■□□□ 1.59
TSPAN4-213ENST00000524895 RIMBP3BA6NNM3 1639 aa25.01■■□□□ 1.59
TSPAN4-213ENST00000524895 RIMBP3Q9UFD9 1639 aa25.01■■□□□ 1.59
TSPAN4-213ENST00000524895 CASKIN1Q8WXD9 1431 aa24.99■■□□□ 1.59
TSPAN4-213ENST00000524895 FYCO1Q9BQS8 1478 aa24.99■■□□□ 1.59
TSPAN4-213ENST00000524895 RAPGEF6Q8TEU7 1601 aa24.98■■□□□ 1.59
TSPAN4-213ENST00000524895 PLB1Q6P1J6 1458 aa24.96■■□□□ 1.59
TSPAN4-213ENST00000524895 HECW1Q76N89 1606 aa24.96■■□□□ 1.59
TSPAN4-213ENST00000524895 ABCA8O94911 1581 aa24.96■■□□□ 1.59
TSPAN4-213ENST00000524895 ATP1B4Q9UN42 357 aaPredicted RBP24.93■■□□□ 1.58
TSPAN4-213ENST00000524895 UACAQ9BZF9 1416 aa24.92■■□□□ 1.58
TSPAN4-213ENST00000524895 ABCC2Q92887 1545 aa24.89■■□□□ 1.57
TSPAN4-213ENST00000524895 NUP153P49790 1475 aaKnown RBP24.88■■□□□ 1.57
TSPAN4-213ENST00000524895 UHRF1BP1LA0JNW5 1464 aa24.85■■□□□ 1.57
TSPAN4-213ENST00000524895 CCDC18Q5T9S5 1454 aa24.84■■□□□ 1.57
TSPAN4-213ENST00000524895 APLP2Q06481 763 aa24.84■■□□□ 1.57
TSPAN4-213ENST00000524895 LRRIQ1Q96JM4 1722 aa24.83■■□□□ 1.57
TSPAN4-213ENST00000524895 ADCY10Q96PN6 1610 aa24.83■■□□□ 1.56
TSPAN4-213ENST00000524895 EPRSP07814 1512 aaKnown RBP24.82■■□□□ 1.56
TSPAN4-213ENST00000524895 CFAP43Q8NDM7 1665 aa24.82■■□□□ 1.56
TSPAN4-213ENST00000524895 TIAM1Q13009 1591 aa24.8■■□□□ 1.56
TSPAN4-213ENST00000524895 ARID3CA6NKF2 412 aa24.79■■□□□ 1.56
TSPAN4-213ENST00000524895 CDK13Q14004 1512 aaKnown RBP24.79■■□□□ 1.56
TSPAN4-213ENST00000524895 MAP3K1Q13233 1512 aa24.78■■□□□ 1.56
TSPAN4-213ENST00000524895 CYB5RLQ6IPT4 315 aa24.78■■□□□ 1.56
TSPAN4-213ENST00000524895 DNAJC5Q9H3Z4 198 aa24.78■■□□□ 1.56
TSPAN4-213ENST00000524895 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.74■■□□□ 1.55
TSPAN4-213ENST00000524895 HNRNPUL2Q1KMD3 747 aaKnown RBP24.74■■□□□ 1.55
TSPAN4-213ENST00000524895 ATP10BO94823 1461 aa24.74■■□□□ 1.55
TSPAN4-213ENST00000524895 KDM5BQ9UGL1 1544 aa24.73■■□□□ 1.55
TSPAN4-213ENST00000524895 ZCCHC11Q5TAX3 1644 aaKnown RBP24.72■■□□□ 1.55
TSPAN4-213ENST00000524895 LRRC9Q6ZRR7 1453 aa24.66■■□□□ 1.54
TSPAN4-213ENST00000524895 CDK11AQ9UQ88 783 aaPredicted RBP24.66■■□□□ 1.54
TSPAN4-213ENST00000524895 NPM1P06748 294 aaKnown RBP eCLIP24.65■■□□□ 1.54
TSPAN4-213ENST00000524895 EHBP1L1Q8N3D4 1523 aa24.65■■□□□ 1.54
TSPAN4-213ENST00000524895 MTUS2Q5JR59 1369 aa24.65■■□□□ 1.54
TSPAN4-213ENST00000524895 MAGI3Q5TCQ9 1506 aa24.63■■□□□ 1.53
TSPAN4-213ENST00000524895 KANK4Q5T7N3 995 aaPredicted RBP24.62■■□□□ 1.53
TSPAN4-213ENST00000524895 PPARGC1BQ86YN6 1023 aaKnown RBP24.62■■□□□ 1.53
TSPAN4-213ENST00000524895 PLEKHD1A6NEE1 506 aa24.59■■□□□ 1.53
TSPAN4-213ENST00000524895 TROQ12816 1431 aaPredicted RBP24.59■■□□□ 1.53
TSPAN4-213ENST00000524895 SUPT6HQ7KZ85 1726 aaKnown RBP24.55■■□□□ 1.52
TSPAN4-213ENST00000524895 ASXL2Q76L83 1435 aa24.54■■□□□ 1.52
TSPAN4-213ENST00000524895 WDR7Q9Y4E6 1490 aa24.53■■□□□ 1.52
TSPAN4-213ENST00000524895 MAPKBP1O60336 1514 aa24.53■■□□□ 1.52
TSPAN4-213ENST00000524895 KIF14Q15058 1648 aa24.53■■□□□ 1.52
TSPAN4-213ENST00000524895 NCOA2Q15596 1464 aa24.48■■□□□ 1.51
TSPAN4-213ENST00000524895 KCNH8Q96L42 1107 aa24.43■■□□□ 1.5
TSPAN4-213ENST00000524895 TTC37Q6PGP7 1564 aa24.39■■□□□ 1.5
TSPAN4-213ENST00000524895 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.39■■□□□ 1.49
TSPAN4-213ENST00000524895 ABCC10Q5T3U5 1492 aa24.38■■□□□ 1.49
TSPAN4-213ENST00000524895 PHLDB1Q86UU1 1377 aa24.38■■□□□ 1.49
TSPAN4-213ENST00000524895 CCNB3Q8WWL7 1395 aa24.37■■□□□ 1.49
TSPAN4-213ENST00000524895 ITSN2Q9NZM3 1697 aa24.36■■□□□ 1.49
TSPAN4-213ENST00000524895 ABCA9Q8IUA7 1624 aa24.35■■□□□ 1.49
TSPAN4-213ENST00000524895 MYOM3Q5VTT5 1437 aa24.35■■□□□ 1.49
TSPAN4-213ENST00000524895 DIP2BQ9P265 1576 aa24.33■■□□□ 1.48
TSPAN4-213ENST00000524895 MYO5CQ9NQX4 1742 aa24.32■■□□□ 1.48
TSPAN4-213ENST00000524895 CDC42BPAQ5VT25 1732 aa24.31■■□□□ 1.48
TSPAN4-213ENST00000524895 GPATCH8Q9UKJ3 1502 aaKnown RBP24.3■■□□□ 1.48
TSPAN4-213ENST00000524895 PREX2Q70Z35 1606 aa24.3■■□□□ 1.48
TSPAN4-213ENST00000524895 GLI2P10070 1586 aa24.29■■□□□ 1.48
TSPAN4-213ENST00000524895 FGD6Q6ZV73 1430 aa24.28■■□□□ 1.48
TSPAN4-213ENST00000524895 MIA2Q96PC5 1412 aa24.26■■□□□ 1.47
TSPAN4-213ENST00000524895 RRBP1Q9P2E9 1410 aaKnown RBP24.25■■□□□ 1.47
TSPAN4-213ENST00000524895 ARHGAP5Q13017 1502 aa24.24■■□□□ 1.47
TSPAN4-213ENST00000524895 FAM69CQ0P6D2 419 aa24.23■■□□□ 1.47
TSPAN4-213ENST00000524895 CFDP1Q9UEE9 299 aaPredicted RBP24.23■■□□□ 1.47
TSPAN4-213ENST00000524895 PLCH2O75038 1416 aa24.23■■□□□ 1.47
TSPAN4-213ENST00000524895 MAP3K4Q9Y6R4 1608 aa24.23■■□□□ 1.47
TSPAN4-213ENST00000524895 CDC42BPBQ9Y5S2 1711 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms