RNA–Protein interactions for RNA: ENST00000524877.5

BEST1-203, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 5,772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-203ENST00000524877 FANCD2Q9BXW9 1451 aa23.63■■□□□ 1.37
BEST1-203ENST00000524877 ABCC8Q09428 1581 aa23.62■■□□□ 1.37
BEST1-203ENST00000524877 CEP162Q5TB80 1403 aa23.6■■□□□ 1.37
BEST1-203ENST00000524877 ACIN1Q9UKV3 1341 aaKnown RBP23.58■■□□□ 1.37
BEST1-203ENST00000524877 ANP32CO43423 234 aa23.57■■□□□ 1.36
BEST1-203ENST00000524877 FHAD1B1AJZ9 1412 aa23.55■■□□□ 1.36
BEST1-203ENST00000524877 TNIKQ9UKE5 1360 aa23.55■■□□□ 1.36
BEST1-203ENST00000524877 C14orf37Q86TY3 774 aa23.55■■□□□ 1.36
BEST1-203ENST00000524877 RRP7BPQ9NSQ0 103 aa23.52■■□□□ 1.36
BEST1-203ENST00000524877 CCNB3Q8WWL7 1395 aa23.52■■□□□ 1.36
BEST1-203ENST00000524877 DAXXQ9UER7 740 aaPredicted RBP23.51■■□□□ 1.35
BEST1-203ENST00000524877 SCAF1Q9H7N4 1312 aaKnown RBP23.49■■□□□ 1.35
BEST1-203ENST00000524877 OSCARQ8IYS5 282 aa23.49■■□□□ 1.35
BEST1-203ENST00000524877 GLIPR1L2Q4G1C9 344 aa23.47■■□□□ 1.35
BEST1-203ENST00000524877 NCAPD3P42695 1498 aa23.44■■□□□ 1.34
BEST1-203ENST00000524877 KDM2AQ9Y2K7 1162 aa23.43■■□□□ 1.34
BEST1-203ENST00000524877 DIEXFQ68CQ4 756 aaKnown RBP23.41■■□□□ 1.34
BEST1-203ENST00000524877 CC2D2AQ9P2K1 1620 aa23.38■■□□□ 1.33
BEST1-203ENST00000524877 KANK1Q14678 1352 aa23.38■■□□□ 1.33
BEST1-203ENST00000524877 MLECQ14165 292 aa23.37■■□□□ 1.33
BEST1-203ENST00000524877 ZBTB47Q9UFB7 747 aaPredicted RBP23.36■■□□□ 1.33
BEST1-203ENST00000524877 SENP3Q9H4L4 574 aaPredicted RBP23.35■■□□□ 1.33
BEST1-203ENST00000524877 EIF5BO60841 1220 aaKnown RBP23.31■■□□□ 1.32
BEST1-203ENST00000524877 RAPGEF2Q9Y4G8 1499 aa23.3■■□□□ 1.32
BEST1-203ENST00000524877 CANXP27824 592 aaKnown RBP23.29■■□□□ 1.32
BEST1-203ENST00000524877 JPH4Q96JJ6 628 aa23.29■■□□□ 1.32
BEST1-203ENST00000524877 CLSPNQ9HAW4 1339 aa23.29■■□□□ 1.32
BEST1-203ENST00000524877 HDGFP51858 240 aaKnown RBP23.28■■□□□ 1.32
BEST1-203ENST00000524877 HAP1P54257 671 aaPredicted RBP23.28■■□□□ 1.32
BEST1-203ENST00000524877 FMN1Q68DA7 1419 aa23.27■■□□□ 1.32
BEST1-203ENST00000524877 CYB5RLQ6IPT4 315 aa23.26■■□□□ 1.31
BEST1-203ENST00000524877 EFCAB2Q5VUJ9 269 aa23.25■■□□□ 1.31
BEST1-203ENST00000524877 ZNF316A6NFI3 1004 aaPredicted RBP23.23■■□□□ 1.31
BEST1-203ENST00000524877 ZBTB7CA1YPR0 619 aa23.22■■□□□ 1.31
BEST1-203ENST00000524877 RGL3Q3MIN7 710 aa23.2■■□□□ 1.31
BEST1-203ENST00000524877 MRC2Q9UBG0 1479 aa23.18■■□□□ 1.3
BEST1-203ENST00000524877 GTF3C3Q9Y5Q9 886 aa23.17■■□□□ 1.3
BEST1-203ENST00000524877 GAPVD1Q14C86 1478 aa23.16■■□□□ 1.3
BEST1-203ENST00000524877 FGD5Q6ZNL6 1462 aa23.15■■□□□ 1.3
BEST1-203ENST00000524877 PLEKHG5O94827 1062 aa23.14■■□□□ 1.3
BEST1-203ENST00000524877 A0A0G2JS52 829 aa23.14■■□□□ 1.29
BEST1-203ENST00000524877 GGT6Q6P531 493 aa23.13■■□□□ 1.29
BEST1-203ENST00000524877 PTPRGP23470 1445 aa23.13■■□□□ 1.29
BEST1-203ENST00000524877 ARHGAP35Q9NRY4 1499 aa23.12■■□□□ 1.29
BEST1-203ENST00000524877 HMGXB3Q12766 1538 aa23.09■■□□□ 1.29
BEST1-203ENST00000524877 POGKQ9P215 609 aa23.09■■□□□ 1.29
BEST1-203ENST00000524877 TMC1Q8TDI8 760 aa23.06■■□□□ 1.28
BEST1-203ENST00000524877 RAD54L2Q9Y4B4 1467 aa23.05■■□□□ 1.28
BEST1-203ENST00000524877 CDCA8Q53HL2 280 aa23.04■■□□□ 1.28
BEST1-203ENST00000524877 FHOD3Q2V2M9 1422 aa23.01■■□□□ 1.27
BEST1-203ENST00000524877 IFT140Q96RY7 1462 aa23.01■■□□□ 1.27
BEST1-203ENST00000524877 AQRO60306 1485 aaKnown RBP eCLIP23■■□□□ 1.27
BEST1-203ENST00000524877 CCDC18Q5T9S5 1454 aa23■■□□□ 1.27
BEST1-203ENST00000524877 NESP48681 1621 aa23■■□□□ 1.27
BEST1-203ENST00000524877 WDR43Q15061 677 aaKnown RBP eCLIP22.98■■□□□ 1.27
BEST1-203ENST00000524877 VPS8Q8N3P4 1428 aa22.98■■□□□ 1.27
BEST1-203ENST00000524877 EIF4G2P78344 907 aaKnown RBP eCLIP22.98■■□□□ 1.27
BEST1-203ENST00000524877 AEBP2Q6ZN18 517 aaPredicted RBP22.97■■□□□ 1.27
BEST1-203ENST00000524877 NPM2Q86SE8 214 aaKnown RBP22.97■■□□□ 1.27
BEST1-203ENST00000524877 GRIN2BQ13224 1484 aa22.97■■□□□ 1.27
BEST1-203ENST00000524877 LMOD2Q6P5Q4 547 aa22.97■■□□□ 1.27
BEST1-203ENST00000524877 SPAG9O60271 1321 aaKnown RBP22.95■■□□□ 1.26
BEST1-203ENST00000524877 CFTRP13569 1480 aa22.95■■□□□ 1.26
BEST1-203ENST00000524877 RSPH4AQ5TD94 716 aa22.94■■□□□ 1.26
BEST1-203ENST00000524877 BCL11AQ9H165 835 aa22.94■■□□□ 1.26
BEST1-203ENST00000524877 ANKRD30AQ9BXX3 1397 aa22.93■■□□□ 1.26
BEST1-203ENST00000524877 FAM69CQ0P6D2 419 aa22.91■■□□□ 1.26
BEST1-203ENST00000524877 CARD11Q9BXL7 1154 aa22.9■■□□□ 1.26
BEST1-203ENST00000524877 HNRNPMP52272 730 aaKnown RBP eCLIP22.87■■□□□ 1.25
BEST1-203ENST00000524877 KIF3BO15066 747 aa22.87■■□□□ 1.25
BEST1-203ENST00000524877 DNAJC5BQ9UF47 199 aa22.87■■□□□ 1.25
BEST1-203ENST00000524877 BICRAQ9NZM4 1560 aa22.86■■□□□ 1.25
BEST1-203ENST00000524877 DDX10Q13206 875 aaKnown RBP22.86■■□□□ 1.25
BEST1-203ENST00000524877 EID1Q9Y6B2 187 aa22.86■■□□□ 1.25
BEST1-203ENST00000524877 CFAP53Q96M91 514 aa22.83■■□□□ 1.24
BEST1-203ENST00000524877 WASHC2CQ9Y4E1 1318 aa22.82■■□□□ 1.24
BEST1-203ENST00000524877 LAMC3Q9Y6N6 1575 aa22.8■■□□□ 1.24
BEST1-203ENST00000524877 IGF1RP08069 1367 aa22.8■■□□□ 1.24
BEST1-203ENST00000524877 KNSTRNQ9Y448 316 aa22.79■■□□□ 1.24
BEST1-203ENST00000524877 FAM9BQ8IZU0 186 aa22.77■■□□□ 1.24
BEST1-203ENST00000524877 DCAF11Q8TEB1 546 aa22.76■■□□□ 1.23
BEST1-203ENST00000524877 TOPBP1Q92547 1522 aa22.75■■□□□ 1.23
BEST1-203ENST00000524877 PKD2Q13563 968 aa22.74■■□□□ 1.23
BEST1-203ENST00000524877 KANK4Q5T7N3 995 aaPredicted RBP22.74■■□□□ 1.23
BEST1-203ENST00000524877 PPM1GO15355 546 aaPredicted RBP22.74■■□□□ 1.23
BEST1-203ENST00000524877 NUP155O75694 1391 aa22.74■■□□□ 1.23
BEST1-203ENST00000524877 PRG4Q92954 1404 aaPredicted RBP22.71■■□□□ 1.23
BEST1-203ENST00000524877 SETD5Q9C0A6 1442 aa22.71■■□□□ 1.23
BEST1-203ENST00000524877 SRPK2P78362 688 aaKnown RBP22.7■■□□□ 1.22
BEST1-203ENST00000524877 DNMBPQ6XZF7 1577 aa22.69■■□□□ 1.22
BEST1-203ENST00000524877 SNAPC4Q5SXM2 1469 aa22.69■■□□□ 1.22
BEST1-203ENST00000524877 PRDM2Q13029 1718 aa22.68■■□□□ 1.22
BEST1-203ENST00000524877 SALL2Q9Y467 1007 aaPredicted RBP22.68■■□□□ 1.22
BEST1-203ENST00000524877 STK26Q9P289 416 aa22.68■■□□□ 1.22
BEST1-203ENST00000524877 MRS2Q9HD23 443 aa22.66■■□□□ 1.22
BEST1-203ENST00000524877 HIRIP3Q9BW71 556 aaPredicted RBP22.66■■□□□ 1.22
BEST1-203ENST00000524877 RUSC2Q8N2Y8 1516 aa22.65■■□□□ 1.22
BEST1-203ENST00000524877 TMF1P82094 1093 aa22.65■■□□□ 1.22
BEST1-203ENST00000524877 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.63■■□□□ 1.21
BEST1-203ENST00000524877 SAFB2Q14151 953 aaKnown RBP eCLIP22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms