RNA–Protein interactions for RNA: ENST00000524775.1

CSTF3-205, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 4

Gene CSTF3, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-205ENST00000524775 RANGAP1P46060 587 aaPredicted RBP18.55■□□□□ 0.56
CSTF3-205ENST00000524775 SYNJ2O15056 1496 aa18.53■□□□□ 0.56
CSTF3-205ENST00000524775 GRIN2AQ12879 1464 aa18.53■□□□□ 0.56
CSTF3-205ENST00000524775 SAMD9Q5K651 1589 aa18.53■□□□□ 0.56
CSTF3-205ENST00000524775 EFCAB5A4FU69 1503 aa18.53■□□□□ 0.56
CSTF3-205ENST00000524775 IQGAP2Q13576 1575 aa18.49■□□□□ 0.55
CSTF3-205ENST00000524775 CEP170Q5SW79 1584 aa18.47■□□□□ 0.55
CSTF3-205ENST00000524775 KIAA0586Q9BVV6 1533 aa18.45■□□□□ 0.54
CSTF3-205ENST00000524775 CHD1O14646 1710 aa18.45■□□□□ 0.54
CSTF3-205ENST00000524775 UGGT2Q9NYU1 1516 aa18.44■□□□□ 0.54
CSTF3-205ENST00000524775 NUP160Q12769 1436 aa18.43■□□□□ 0.54
CSTF3-205ENST00000524775 TRIM26Q12899 539 aaPredicted RBP18.42■□□□□ 0.54
CSTF3-205ENST00000524775 PPARGC1BQ86YN6 1023 aaKnown RBP18.42■□□□□ 0.54
CSTF3-205ENST00000524775 FHOD3Q2V2M9 1422 aa18.4■□□□□ 0.54
CSTF3-205ENST00000524775 CHMP7Q8WUX9 453 aaPredicted RBP18.39■□□□□ 0.53
CSTF3-205ENST00000524775 P3H3Q8IVL6 736 aa18.37■□□□□ 0.53
CSTF3-205ENST00000524775 PCGF6Q9BYE7 350 aa18.37■□□□□ 0.53
CSTF3-205ENST00000524775 PCF11O94913 1555 aaKnown RBP18.37■□□□□ 0.53
CSTF3-205ENST00000524775 MAP3K1Q13233 1512 aa18.35■□□□□ 0.53
CSTF3-205ENST00000524775 LRRIQ1Q96JM4 1722 aa18.35■□□□□ 0.53
CSTF3-205ENST00000524775 DISP1Q96F81 1524 aa18.34■□□□□ 0.53
CSTF3-205ENST00000524775 KIAA0556O60303 1618 aa18.32■□□□□ 0.52
CSTF3-205ENST00000524775 CASKIN1Q8WXD9 1431 aa18.32■□□□□ 0.52
CSTF3-205ENST00000524775 CFAP43Q8NDM7 1665 aa18.31■□□□□ 0.52
CSTF3-205ENST00000524775 FYCO1Q9BQS8 1478 aa18.31■□□□□ 0.52
CSTF3-205ENST00000524775 TIAM1Q13009 1591 aa18.3■□□□□ 0.52
CSTF3-205ENST00000524775 FBLN2P98095 1184 aa18.3■□□□□ 0.52
CSTF3-205ENST00000524775 FMN1Q68DA7 1419 aa18.3■□□□□ 0.52
CSTF3-205ENST00000524775 KANK4Q5T7N3 995 aaPredicted RBP18.26■□□□□ 0.51
CSTF3-205ENST00000524775 SHROOM2Q13796 1616 aa18.26■□□□□ 0.51
CSTF3-205ENST00000524775 APLP2Q06481 763 aa18.24■□□□□ 0.51
CSTF3-205ENST00000524775 JPH4Q96JJ6 628 aa18.23■□□□□ 0.51
CSTF3-205ENST00000524775 CLASP1Q7Z460 1538 aa18.21■□□□□ 0.51
CSTF3-205ENST00000524775 TTBK1Q5TCY1 1321 aaPredicted RBP18.2■□□□□ 0.5
CSTF3-205ENST00000524775 LRRC9Q6ZRR7 1453 aa18.19■□□□□ 0.5
CSTF3-205ENST00000524775 HECW1Q76N89 1606 aa18.16■□□□□ 0.5
CSTF3-205ENST00000524775 RAPGEF6Q8TEU7 1601 aa18.14■□□□□ 0.49
CSTF3-205ENST00000524775 CARMIL2Q6F5E8 1435 aa18.14■□□□□ 0.49
CSTF3-205ENST00000524775 PRG4Q92954 1404 aaPredicted RBP18.12■□□□□ 0.49
CSTF3-205ENST00000524775 EPRSP07814 1512 aaKnown RBP18.1■□□□□ 0.49
CSTF3-205ENST00000524775 ABCA8O94911 1581 aa18.09■□□□□ 0.49
CSTF3-205ENST00000524775 ERCC6L2Q5T890 1561 aa18.09■□□□□ 0.49
CSTF3-205ENST00000524775 MAGI3Q5TCQ9 1506 aa18.09■□□□□ 0.49
CSTF3-205ENST00000524775 CCDC18Q5T9S5 1454 aa18.09■□□□□ 0.49
CSTF3-205ENST00000524775 NUP153P49790 1475 aaKnown RBP18.08■□□□□ 0.49
CSTF3-205ENST00000524775 ATP1B4Q9UN42 357 aaPredicted RBP18.08■□□□□ 0.48
CSTF3-205ENST00000524775 RRBP1Q9P2E9 1410 aaKnown RBP18.07■□□□□ 0.48
CSTF3-205ENST00000524775 CDK13Q14004 1512 aaKnown RBP18.06■□□□□ 0.48
CSTF3-205ENST00000524775 PLB1Q6P1J6 1458 aa18.06■□□□□ 0.48
CSTF3-205ENST00000524775 EHBP1L1Q8N3D4 1523 aa18.03■□□□□ 0.48
CSTF3-205ENST00000524775 ARHGEF11O15085 1522 aa18.02■□□□□ 0.47
CSTF3-205ENST00000524775 PHLDB1Q86UU1 1377 aa18.02■□□□□ 0.47
CSTF3-205ENST00000524775 SUPT6HQ7KZ85 1726 aaKnown RBP18.01■□□□□ 0.47
CSTF3-205ENST00000524775 PTPRGP23470 1445 aa17.98■□□□□ 0.47
CSTF3-205ENST00000524775 MTUS2Q5JR59 1369 aa17.97■□□□□ 0.47
CSTF3-205ENST00000524775 NCOA2Q15596 1464 aa17.95■□□□□ 0.46
CSTF3-205ENST00000524775 CCNB3Q8WWL7 1395 aa17.94■□□□□ 0.46
CSTF3-205ENST00000524775 ATP10BO94823 1461 aa17.94■□□□□ 0.46
CSTF3-205ENST00000524775 ADCY10Q96PN6 1610 aa17.93■□□□□ 0.46
CSTF3-205ENST00000524775 DNAJC5Q9H3Z4 198 aa17.92■□□□□ 0.46
CSTF3-205ENST00000524775 UACAQ9BZF9 1416 aa17.91■□□□□ 0.46
CSTF3-205ENST00000524775 ARID3CA6NKF2 412 aa17.9■□□□□ 0.46
CSTF3-205ENST00000524775 OSCARQ8IYS5 282 aa17.9■□□□□ 0.46
CSTF3-205ENST00000524775 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.89■□□□□ 0.45
CSTF3-205ENST00000524775 ABCC2Q92887 1545 aa17.88■□□□□ 0.45
CSTF3-205ENST00000524775 TROQ12816 1431 aaPredicted RBP17.88■□□□□ 0.45
CSTF3-205ENST00000524775 MYOM3Q5VTT5 1437 aa17.88■□□□□ 0.45
CSTF3-205ENST00000524775 FGD6Q6ZV73 1430 aa17.88■□□□□ 0.45
CSTF3-205ENST00000524775 HRCP23327 699 aa17.87■□□□□ 0.45
CSTF3-205ENST00000524775 UHRF1BP1LA0JNW5 1464 aa17.87■□□□□ 0.45
CSTF3-205ENST00000524775 HNRNPUL2Q1KMD3 747 aaKnown RBP17.86■□□□□ 0.45
CSTF3-205ENST00000524775 KIF14Q15058 1648 aa17.85■□□□□ 0.45
CSTF3-205ENST00000524775 PTPN23Q9H3S7 1636 aa17.83■□□□□ 0.45
CSTF3-205ENST00000524775 TCOF1Q13428 1488 aaKnown RBP17.82■□□□□ 0.44
CSTF3-205ENST00000524775 CDK11AQ9UQ88 783 aaPredicted RBP17.82■□□□□ 0.44
CSTF3-205ENST00000524775 ZCCHC11Q5TAX3 1644 aaKnown RBP17.81■□□□□ 0.44
CSTF3-205ENST00000524775 CDC42BPAQ5VT25 1732 aa17.8■□□□□ 0.44
CSTF3-205ENST00000524775 KDM5BQ9UGL1 1544 aa17.79■□□□□ 0.44
CSTF3-205ENST00000524775 ABCC10Q5T3U5 1492 aa17.79■□□□□ 0.44
CSTF3-205ENST00000524775 MIA2Q96PC5 1412 aa17.79■□□□□ 0.44
CSTF3-205ENST00000524775 ITSN2Q9NZM3 1697 aa17.77■□□□□ 0.43
CSTF3-205ENST00000524775 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.76■□□□□ 0.43
CSTF3-205ENST00000524775 PLEKHD1A6NEE1 506 aa17.75■□□□□ 0.43
CSTF3-205ENST00000524775 GPATCH8Q9UKJ3 1502 aaKnown RBP17.75■□□□□ 0.43
CSTF3-205ENST00000524775 FAM50AQ14320 339 aaKnown RBP17.74■□□□□ 0.43
CSTF3-205ENST00000524775 PTPRKQ15262 1439 aa17.73■□□□□ 0.43
CSTF3-205ENST00000524775 CDC42BPBQ9Y5S2 1711 aa17.72■□□□□ 0.43
CSTF3-205ENST00000524775 ITGAEP38570 1179 aa17.68■□□□□ 0.42
CSTF3-205ENST00000524775 DNMT1P26358 1616 aaKnown RBP17.67■□□□□ 0.42
CSTF3-205ENST00000524775 PREX2Q70Z35 1606 aa17.67■□□□□ 0.42
CSTF3-205ENST00000524775 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.67■□□□□ 0.42
CSTF3-205ENST00000524775 TTC37Q6PGP7 1564 aa17.66■□□□□ 0.42
CSTF3-205ENST00000524775 SETD5Q9C0A6 1442 aa17.64■□□□□ 0.42
CSTF3-205ENST00000524775 ZNF644Q9H582 1327 aaPredicted RBP17.64■□□□□ 0.41
CSTF3-205ENST00000524775 RIMBP3CA6NJZ7 1639 aa17.64■□□□□ 0.41
CSTF3-205ENST00000524775 RIMBP3BA6NNM3 1639 aa17.64■□□□□ 0.41
CSTF3-205ENST00000524775 RIMBP3Q9UFD9 1639 aa17.64■□□□□ 0.41
CSTF3-205ENST00000524775 MYO5CQ9NQX4 1742 aa17.64■□□□□ 0.41
CSTF3-205ENST00000524775 CAMSAP2Q08AD1 1489 aa17.63■□□□□ 0.41
CSTF3-205ENST00000524775 CROCC2H7BZ55 1655 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms