RNA–Protein interactions for RNA: ENST00000524475.1

SF3B2-202, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 432 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-202ENST00000524475 PRXQ9BXM0 1461 aa25.37■■□□□ 1.65
SF3B2-202ENST00000524475 KIAA0586Q9BVV6 1533 aa25.37■■□□□ 1.65
SF3B2-202ENST00000524475 ARAP1Q96P48 1450 aa25.3■■□□□ 1.64
SF3B2-202ENST00000524475 CSRNP3Q8WYN3 585 aa25.29■■□□□ 1.64
SF3B2-202ENST00000524475 JPH4Q96JJ6 628 aa25.25■■□□□ 1.63
SF3B2-202ENST00000524475 IQGAP2Q13576 1575 aa25.23■■□□□ 1.63
SF3B2-202ENST00000524475 ERCC6L2Q5T890 1561 aa25.22■■□□□ 1.63
SF3B2-202ENST00000524475 PRG4Q92954 1404 aaPredicted RBP25.2■■□□□ 1.63
SF3B2-202ENST00000524475 CTTNBP2Q8WZ74 1663 aa25.18■■□□□ 1.62
SF3B2-202ENST00000524475 KIF21BO75037 1637 aa25.15■■□□□ 1.62
SF3B2-202ENST00000524475 CYB5RLQ6IPT4 315 aa25.15■■□□□ 1.62
SF3B2-202ENST00000524475 UGGT2Q9NYU1 1516 aa25.12■■□□□ 1.61
SF3B2-202ENST00000524475 CARMIL2Q6F5E8 1435 aa25.07■■□□□ 1.6
SF3B2-202ENST00000524475 FAM9AQ8IZU1 332 aaPredicted RBP25.07■■□□□ 1.6
SF3B2-202ENST00000524475 DISP1Q96F81 1524 aa25.04■■□□□ 1.6
SF3B2-202ENST00000524475 KIAA0556O60303 1618 aa24.99■■□□□ 1.59
SF3B2-202ENST00000524475 GOLGA3Q08378 1498 aa24.98■■□□□ 1.59
SF3B2-202ENST00000524475 TNIKQ9UKE5 1360 aa24.98■■□□□ 1.59
SF3B2-202ENST00000524475 PTPRGP23470 1445 aa24.93■■□□□ 1.58
SF3B2-202ENST00000524475 SAMD9Q5K651 1589 aa24.89■■□□□ 1.58
SF3B2-202ENST00000524475 ADCY10Q96PN6 1610 aa24.85■■□□□ 1.57
SF3B2-202ENST00000524475 UHRF1BP1LA0JNW5 1464 aa24.83■■□□□ 1.56
SF3B2-202ENST00000524475 EFCAB5A4FU69 1503 aa24.81■■□□□ 1.56
SF3B2-202ENST00000524475 UACAQ9BZF9 1416 aa24.79■■□□□ 1.56
SF3B2-202ENST00000524475 UBTFP17480 764 aaKnown RBP24.78■■□□□ 1.56
SF3B2-202ENST00000524475 ABCC2Q92887 1545 aa24.77■■□□□ 1.56
SF3B2-202ENST00000524475 MAPKBP1O60336 1514 aa24.74■■□□□ 1.55
SF3B2-202ENST00000524475 ABCA8O94911 1581 aa24.72■■□□□ 1.55
SF3B2-202ENST00000524475 NPM1P06748 294 aaKnown RBP eCLIP24.69■■□□□ 1.54
SF3B2-202ENST00000524475 KDM5BQ9UGL1 1544 aa24.69■■□□□ 1.54
SF3B2-202ENST00000524475 TTBK1Q5TCY1 1321 aaPredicted RBP24.68■■□□□ 1.54
SF3B2-202ENST00000524475 PLB1Q6P1J6 1458 aa24.68■■□□□ 1.54
SF3B2-202ENST00000524475 EHMT2Q96KQ7 1210 aa24.65■■□□□ 1.54
SF3B2-202ENST00000524475 FHOD3Q2V2M9 1422 aa24.64■■□□□ 1.54
SF3B2-202ENST00000524475 ARHGAP35Q9NRY4 1499 aa24.64■■□□□ 1.53
SF3B2-202ENST00000524475 P3H3Q8IVL6 736 aa24.63■■□□□ 1.53
SF3B2-202ENST00000524475 ZCCHC11Q5TAX3 1644 aaKnown RBP24.6■■□□□ 1.53
SF3B2-202ENST00000524475 RAPGEF6Q8TEU7 1601 aa24.59■■□□□ 1.53
SF3B2-202ENST00000524475 RANGAP1P46060 587 aaPredicted RBP24.58■■□□□ 1.53
SF3B2-202ENST00000524475 TRHP20396 242 aaPredicted RBP24.57■■□□□ 1.52
SF3B2-202ENST00000524475 ABCC10Q5T3U5 1492 aa24.57■■□□□ 1.52
SF3B2-202ENST00000524475 KIF13AQ9H1H9 1805 aa24.55■■□□□ 1.52
SF3B2-202ENST00000524475 FMN1Q68DA7 1419 aa24.54■■□□□ 1.52
SF3B2-202ENST00000524475 DIP2BQ9P265 1576 aa24.54■■□□□ 1.52
SF3B2-202ENST00000524475 ASXL2Q76L83 1435 aa24.53■■□□□ 1.52
SF3B2-202ENST00000524475 NUP153P49790 1475 aaKnown RBP24.5■■□□□ 1.51
SF3B2-202ENST00000524475 CLIP1P30622 1438 aa24.49■■□□□ 1.51
SF3B2-202ENST00000524475 ATP10BO94823 1461 aa24.48■■□□□ 1.51
SF3B2-202ENST00000524475 GLI2P10070 1586 aa24.46■■□□□ 1.51
SF3B2-202ENST00000524475 WDR7Q9Y4E6 1490 aa24.45■■□□□ 1.51
SF3B2-202ENST00000524475 EPRSP07814 1512 aaKnown RBP24.41■■□□□ 1.5
SF3B2-202ENST00000524475 FAM69CQ0P6D2 419 aa24.41■■□□□ 1.5
SF3B2-202ENST00000524475 HECW1Q76N89 1606 aa24.41■■□□□ 1.5
SF3B2-202ENST00000524475 CEP162Q5TB80 1403 aa24.41■■□□□ 1.5
SF3B2-202ENST00000524475 LOC105371045A0A1W2PR82 267 aa24.36■■□□□ 1.49
SF3B2-202ENST00000524475 CASKIN1Q8WXD9 1431 aa24.35■■□□□ 1.49
SF3B2-202ENST00000524475 MAP3K4Q9Y6R4 1608 aa24.33■■□□□ 1.49
SF3B2-202ENST00000524475 FYCO1Q9BQS8 1478 aa24.32■■□□□ 1.48
SF3B2-202ENST00000524475 PCF11O94913 1555 aaKnown RBP24.32■■□□□ 1.48
SF3B2-202ENST00000524475 ARID3CA6NKF2 412 aa24.29■■□□□ 1.48
SF3B2-202ENST00000524475 CFAP43Q8NDM7 1665 aa24.29■■□□□ 1.48
SF3B2-202ENST00000524475 CDK13Q14004 1512 aaKnown RBP24.28■■□□□ 1.48
SF3B2-202ENST00000524475 CCDC18Q5T9S5 1454 aa24.27■■□□□ 1.48
SF3B2-202ENST00000524475 LRRIQ1Q96JM4 1722 aa24.27■■□□□ 1.48
SF3B2-202ENST00000524475 PPRC1Q5VV67 1664 aaKnown RBP24.26■■□□□ 1.47
SF3B2-202ENST00000524475 ABCA9Q8IUA7 1624 aa24.24■■□□□ 1.47
SF3B2-202ENST00000524475 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.24■■□□□ 1.47
SF3B2-202ENST00000524475 HNRNPUL2Q1KMD3 747 aaKnown RBP24.24■■□□□ 1.47
SF3B2-202ENST00000524475 PLEKHD1A6NEE1 506 aa24.23■■□□□ 1.47
SF3B2-202ENST00000524475 TSPOAP1O95153 1857 aa24.23■■□□□ 1.47
SF3B2-202ENST00000524475 MAGI3Q5TCQ9 1506 aa24.21■■□□□ 1.47
SF3B2-202ENST00000524475 TEX14Q8IWB6 1497 aa24.2■■□□□ 1.47
SF3B2-202ENST00000524475 KCNH8Q96L42 1107 aa24.2■■□□□ 1.46
SF3B2-202ENST00000524475 CDK11AQ9UQ88 783 aaPredicted RBP24.2■■□□□ 1.46
SF3B2-202ENST00000524475 CD109Q6YHK3 1445 aa24.19■■□□□ 1.46
SF3B2-202ENST00000524475 ATP1B4Q9UN42 357 aaPredicted RBP24.18■■□□□ 1.46
SF3B2-202ENST00000524475 TROQ12816 1431 aaPredicted RBP24.15■■□□□ 1.46
SF3B2-202ENST00000524475 VPS8Q8N3P4 1428 aa24.14■■□□□ 1.45
SF3B2-202ENST00000524475 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.12■■□□□ 1.45
SF3B2-202ENST00000524475 KIF14Q15058 1648 aa24.1■■□□□ 1.45
SF3B2-202ENST00000524475 KDM6BO15054 1643 aa24.09■■□□□ 1.45
SF3B2-202ENST00000524475 TTC37Q6PGP7 1564 aa24.08■■□□□ 1.45
SF3B2-202ENST00000524475 PHLDB1Q86UU1 1377 aa24.06■■□□□ 1.44
SF3B2-202ENST00000524475 NEO1Q92859 1461 aa24.04■■□□□ 1.44
SF3B2-202ENST00000524475 ARAP3Q8WWN8 1544 aa24.04■■□□□ 1.44
SF3B2-202ENST00000524475 CFAP74Q9C0B2 1584 aa24.01■■□□□ 1.43
SF3B2-202ENST00000524475 MAP3K1Q13233 1512 aa24■■□□□ 1.43
SF3B2-202ENST00000524475 MYO5CQ9NQX4 1742 aa23.99■■□□□ 1.43
SF3B2-202ENST00000524475 PLCH2O75038 1416 aa23.99■■□□□ 1.43
SF3B2-202ENST00000524475 EHBP1L1Q8N3D4 1523 aa23.98■■□□□ 1.43
SF3B2-202ENST00000524475 TIAM1Q13009 1591 aa23.98■■□□□ 1.43
SF3B2-202ENST00000524475 COL17A1Q9UMD9 1497 aaPredicted RBP23.97■■□□□ 1.43
SF3B2-202ENST00000524475 MTUS2Q5JR59 1369 aa23.95■■□□□ 1.42
SF3B2-202ENST00000524475 FANCAO15360 1455 aa23.94■■□□□ 1.42
SF3B2-202ENST00000524475 PREX2Q70Z35 1606 aa23.92■■□□□ 1.42
SF3B2-202ENST00000524475 AKNAQ7Z591 1439 aa23.9■■□□□ 1.42
SF3B2-202ENST00000524475 CDC42BPAQ5VT25 1732 aa23.88■■□□□ 1.41
SF3B2-202ENST00000524475 CDC42BPBQ9Y5S2 1711 aa23.88■■□□□ 1.41
SF3B2-202ENST00000524475 EFCAB2Q5VUJ9 269 aa23.86■■□□□ 1.41
SF3B2-202ENST00000524475 LRRC9Q6ZRR7 1453 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms