RNA–Protein interactions for RNA: ENST00000524127.5

CTNNA1-241, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 483 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-241ENST00000524127 RIMBP3BA6NNM3 1639 aa7.49□□□□□ -1.21
CTNNA1-241ENST00000524127 RIMBP3Q9UFD9 1639 aa7.49□□□□□ -1.21
CTNNA1-241ENST00000524127 RUSC2Q8N2Y8 1516 aa7.47□□□□□ -1.21
CTNNA1-241ENST00000524127 GTF3C3Q9Y5Q9 886 aa7.47□□□□□ -1.21
CTNNA1-241ENST00000524127 CEP170Q5SW79 1584 aa7.46□□□□□ -1.21
CTNNA1-241ENST00000524127 FBLN2P98095 1184 aa7.46□□□□□ -1.22
CTNNA1-241ENST00000524127 FAM9AQ8IZU1 332 aaPredicted RBP7.46□□□□□ -1.22
CTNNA1-241ENST00000524127 ARHGEF11O15085 1522 aa7.46□□□□□ -1.22
CTNNA1-241ENST00000524127 ERICH3Q5RHP9 1530 aa7.46□□□□□ -1.22
CTNNA1-241ENST00000524127 IGF1RP08069 1367 aa7.45□□□□□ -1.22
CTNNA1-241ENST00000524127 EEA1Q15075 1411 aa7.44□□□□□ -1.22
CTNNA1-241ENST00000524127 GRIN2AQ12879 1464 aa7.44□□□□□ -1.22
CTNNA1-241ENST00000524127 ERCC6L2Q5T890 1561 aa7.44□□□□□ -1.22
CTNNA1-241ENST00000524127 NUP160Q12769 1436 aa7.44□□□□□ -1.22
CTNNA1-241ENST00000524127 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.43□□□□□ -1.22
CTNNA1-241ENST00000524127 CHMP7Q8WUX9 453 aaPredicted RBP7.43□□□□□ -1.22
CTNNA1-241ENST00000524127 TNIKQ9UKE5 1360 aa7.43□□□□□ -1.22
CTNNA1-241ENST00000524127 FHAD1B1AJZ9 1412 aa7.43□□□□□ -1.22
CTNNA1-241ENST00000524127 ARAP1Q96P48 1450 aa7.43□□□□□ -1.22
CTNNA1-241ENST00000524127 ZNF316A6NFI3 1004 aaPredicted RBP7.42□□□□□ -1.22
CTNNA1-241ENST00000524127 CLSPNQ9HAW4 1339 aa7.42□□□□□ -1.22
CTNNA1-241ENST00000524127 KIF27Q86VH2 1401 aa7.4□□□□□ -1.22
CTNNA1-241ENST00000524127 SHROOM2Q13796 1616 aa7.4□□□□□ -1.22
CTNNA1-241ENST00000524127 CEP162Q5TB80 1403 aa7.39□□□□□ -1.23
CTNNA1-241ENST00000524127 CUL7Q14999 1698 aa7.38□□□□□ -1.23
CTNNA1-241ENST00000524127 FOXD1Q16676 465 aa7.38□□□□□ -1.23
CTNNA1-241ENST00000524127 CARMIL1Q5VZK9 1371 aa7.36□□□□□ -1.23
CTNNA1-241ENST00000524127 CYB5RLQ6IPT4 315 aa7.35□□□□□ -1.23
CTNNA1-241ENST00000524127 GOLGA3Q08378 1498 aa7.33□□□□□ -1.24
CTNNA1-241ENST00000524127 PRXQ9BXM0 1461 aa7.33□□□□□ -1.24
CTNNA1-241ENST00000524127 KIAA0586Q9BVV6 1533 aa7.32□□□□□ -1.24
CTNNA1-241ENST00000524127 TTBK1Q5TCY1 1321 aaPredicted RBP7.31□□□□□ -1.24
CTNNA1-241ENST00000524127 PRG4Q92954 1404 aaPredicted RBP7.31□□□□□ -1.24
CTNNA1-241ENST00000524127 JPH4Q96JJ6 628 aa7.31□□□□□ -1.24
CTNNA1-241ENST00000524127 RAPGEF2Q9Y4G8 1499 aa7.3□□□□□ -1.24
CTNNA1-241ENST00000524127 CSRNP3Q8WYN3 585 aa7.3□□□□□ -1.24
CTNNA1-241ENST00000524127 DISP1Q96F81 1524 aa7.29□□□□□ -1.24
CTNNA1-241ENST00000524127 IQGAP2Q13576 1575 aa7.29□□□□□ -1.24
CTNNA1-241ENST00000524127 CTTNBP2Q8WZ74 1663 aa7.28□□□□□ -1.24
CTNNA1-241ENST00000524127 KIF21BO75037 1637 aa7.28□□□□□ -1.24
CTNNA1-241ENST00000524127 MIER1Q8N108 512 aa7.27□□□□□ -1.25
CTNNA1-241ENST00000524127 EHMT2Q96KQ7 1210 aa7.27□□□□□ -1.25
CTNNA1-241ENST00000524127 ADCY10Q96PN6 1610 aa7.27□□□□□ -1.25
CTNNA1-241ENST00000524127 UGGT2Q9NYU1 1516 aa7.27□□□□□ -1.25
CTNNA1-241ENST00000524127 MSH5O43196 834 aa7.26□□□□□ -1.25
CTNNA1-241ENST00000524127 VPS8Q8N3P4 1428 aa7.25□□□□□ -1.25
CTNNA1-241ENST00000524127 KIAA0556O60303 1618 aa7.24□□□□□ -1.25
CTNNA1-241ENST00000524127 KIF13AQ9H1H9 1805 aa7.24□□□□□ -1.25
CTNNA1-241ENST00000524127 CLIP1P30622 1438 aa7.21□□□□□ -1.25
CTNNA1-241ENST00000524127 YTHDC1Q96MU7 727 aaKnown RBP7.21□□□□□ -1.26
CTNNA1-241ENST00000524127 SAMD9Q5K651 1589 aa7.2□□□□□ -1.26
CTNNA1-241ENST00000524127 UBTFP17480 764 aaKnown RBP7.2□□□□□ -1.26
CTNNA1-241ENST00000524127 PTPRGP23470 1445 aa7.19□□□□□ -1.26
CTNNA1-241ENST00000524127 PLB1Q6P1J6 1458 aa7.18□□□□□ -1.26
CTNNA1-241ENST00000524127 ABCC2Q92887 1545 aa7.18□□□□□ -1.26
CTNNA1-241ENST00000524127 ABCA8O94911 1581 aa7.18□□□□□ -1.26
CTNNA1-241ENST00000524127 SUPT16HQ9Y5B9 1047 aaKnown RBP7.18□□□□□ -1.26
CTNNA1-241ENST00000524127 CARMIL2Q6F5E8 1435 aa7.17□□□□□ -1.26
CTNNA1-241ENST00000524127 UHRF1BP1LA0JNW5 1464 aa7.17□□□□□ -1.26
CTNNA1-241ENST00000524127 MAPKBP1O60336 1514 aa7.17□□□□□ -1.26
CTNNA1-241ENST00000524127 DIP2BQ9P265 1576 aa7.16□□□□□ -1.26
CTNNA1-241ENST00000524127 ZCCHC11Q5TAX3 1644 aaKnown RBP7.16□□□□□ -1.26
CTNNA1-241ENST00000524127 P3H3Q8IVL6 736 aa7.16□□□□□ -1.26
CTNNA1-241ENST00000524127 ANP32EQ9BTT0 268 aa7.16□□□□□ -1.26
CTNNA1-241ENST00000524127 DHX57Q6P158 1386 aaKnown RBP7.16□□□□□ -1.26
CTNNA1-241ENST00000524127 UACAQ9BZF9 1416 aa7.16□□□□□ -1.26
CTNNA1-241ENST00000524127 KDM5BQ9UGL1 1544 aa7.16□□□□□ -1.26
CTNNA1-241ENST00000524127 TRHP20396 242 aaPredicted RBP7.15□□□□□ -1.26
CTNNA1-241ENST00000524127 APLP2Q06481 763 aa7.15□□□□□ -1.26
CTNNA1-241ENST00000524127 HNRNPUL2Q1KMD3 747 aaKnown RBP7.15□□□□□ -1.26
CTNNA1-241ENST00000524127 FHOD3Q2V2M9 1422 aa7.15□□□□□ -1.27
CTNNA1-241ENST00000524127 PPRC1Q5VV67 1664 aaKnown RBP7.15□□□□□ -1.27
CTNNA1-241ENST00000524127 ABCC10Q5T3U5 1492 aa7.14□□□□□ -1.27
CTNNA1-241ENST00000524127 TSHZ2Q9NRE2 1034 aa7.14□□□□□ -1.27
CTNNA1-241ENST00000524127 TSPOAP1O95153 1857 aa7.13□□□□□ -1.27
CTNNA1-241ENST00000524127 ARHGAP35Q9NRY4 1499 aa7.13□□□□□ -1.27
CTNNA1-241ENST00000524127 ASXL2Q76L83 1435 aa7.13□□□□□ -1.27
CTNNA1-241ENST00000524127 RRBP1Q9P2E9 1410 aaKnown RBP7.13□□□□□ -1.27
CTNNA1-241ENST00000524127 RANGAP1P46060 587 aaPredicted RBP7.13□□□□□ -1.27
CTNNA1-241ENST00000524127 LRRIQ1Q96JM4 1722 aa7.12□□□□□ -1.27
CTNNA1-241ENST00000524127 RAPGEF6Q8TEU7 1601 aa7.11□□□□□ -1.27
CTNNA1-241ENST00000524127 ATP10BO94823 1461 aa7.11□□□□□ -1.27
CTNNA1-241ENST00000524127 NUP153P49790 1475 aaKnown RBP7.11□□□□□ -1.27
CTNNA1-241ENST00000524127 EFCAB5A4FU69 1503 aa7.1□□□□□ -1.27
CTNNA1-241ENST00000524127 GLI2P10070 1586 aa7.09□□□□□ -1.27
CTNNA1-241ENST00000524127 ARID3CA6NKF2 412 aa7.09□□□□□ -1.27
CTNNA1-241ENST00000524127 FAM69CQ0P6D2 419 aa7.09□□□□□ -1.27
CTNNA1-241ENST00000524127 EPRSP07814 1512 aaKnown RBP7.09□□□□□ -1.27
CTNNA1-241ENST00000524127 MAP3K4Q9Y6R4 1608 aa7.09□□□□□ -1.28
CTNNA1-241ENST00000524127 MAP3K1Q13233 1512 aa7.07□□□□□ -1.28
CTNNA1-241ENST00000524127 CDK13Q14004 1512 aaKnown RBP7.07□□□□□ -1.28
CTNNA1-241ENST00000524127 COL17A1Q9UMD9 1497 aaPredicted RBP7.07□□□□□ -1.28
CTNNA1-241ENST00000524127 WDR7Q9Y4E6 1490 aa7.07□□□□□ -1.28
CTNNA1-241ENST00000524127 NPM1P06748 294 aaKnown RBP eCLIP7.06□□□□□ -1.28
CTNNA1-241ENST00000524127 TIMELESSQ9UNS1 1208 aa7.06□□□□□ -1.28
CTNNA1-241ENST00000524127 CCNB3Q8WWL7 1395 aa7.05□□□□□ -1.28
CTNNA1-241ENST00000524127 PCF11O94913 1555 aaKnown RBP7.04□□□□□ -1.28
CTNNA1-241ENST00000524127 CFAP43Q8NDM7 1665 aa7.03□□□□□ -1.28
CTNNA1-241ENST00000524127 MAGI3Q5TCQ9 1506 aa7.03□□□□□ -1.28
CTNNA1-241ENST00000524127 CCER2I3L3R5 266 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms