RNA–Protein interactions for RNA: ENST00000523962.5

NECAB1-206, Transcript of N-terminal EF-hand calcium binding protein 1, humanhuman

TSL 3

Gene NECAB1, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB1-206ENST00000523962 RNF39Q9H2S5 420 aa17.67■□□□□ 0.42
NECAB1-206ENST00000523962 RNF216Q9NWF9 866 aaPredicted RBP17.66■□□□□ 0.42
NECAB1-206ENST00000523962 ABCA10Q8WWZ4 1543 aa17.64■□□□□ 0.41
NECAB1-206ENST00000523962 SUPT5HO00267 1087 aaKnown RBP17.6■□□□□ 0.41
NECAB1-206ENST00000523962 PBRM1Q86U86 1689 aa17.59■□□□□ 0.41
NECAB1-206ENST00000523962 WRNQ14191 1432 aaPredicted RBP eCLIP17.58■□□□□ 0.41
NECAB1-206ENST00000523962 GRIN2AQ12879 1464 aa17.57■□□□□ 0.4
NECAB1-206ENST00000523962 ABCA5Q8WWZ7 1642 aa17.56■□□□□ 0.4
NECAB1-206ENST00000523962 ERCC6L2Q5T890 1561 aa17.54■□□□□ 0.4
NECAB1-206ENST00000523962 NUP160Q12769 1436 aa17.53■□□□□ 0.4
NECAB1-206ENST00000523962 FHAD1B1AJZ9 1412 aa17.51■□□□□ 0.39
NECAB1-206ENST00000523962 CEP170Q5SW79 1584 aa17.49■□□□□ 0.39
NECAB1-206ENST00000523962 JPH4Q96JJ6 628 aa17.48■□□□□ 0.39
NECAB1-206ENST00000523962 ADAMTS12P58397 1594 aa17.46■□□□□ 0.39
NECAB1-206ENST00000523962 PRG4Q92954 1404 aaPredicted RBP17.44■□□□□ 0.38
NECAB1-206ENST00000523962 NPM1P06748 294 aaKnown RBP eCLIP17.42■□□□□ 0.38
NECAB1-206ENST00000523962 C1QBPQ07021 282 aaKnown RBP17.42■□□□□ 0.38
NECAB1-206ENST00000523962 TOP2BQ02880 1626 aa17.4■□□□□ 0.38
NECAB1-206ENST00000523962 FAM69CQ0P6D2 419 aa17.4■□□□□ 0.38
NECAB1-206ENST00000523962 ERICH3Q5RHP9 1530 aa17.4■□□□□ 0.38
NECAB1-206ENST00000523962 SHROOM2Q13796 1616 aa17.39■□□□□ 0.38
NECAB1-206ENST00000523962 BIVM-ERCC5R4GMW8 1640 aa17.36■□□□□ 0.37
NECAB1-206ENST00000523962 ABCC10Q5T3U5 1492 aa17.29■□□□□ 0.36
NECAB1-206ENST00000523962 KIF13AQ9H1H9 1805 aa17.27■□□□□ 0.36
NECAB1-206ENST00000523962 IGF1RP08069 1367 aa17.23■□□□□ 0.35
NECAB1-206ENST00000523962 NCBP3Q53F19 620 aaKnown RBP17.22■□□□□ 0.35
NECAB1-206ENST00000523962 MAPKBP1O60336 1514 aa17.21■□□□□ 0.34
NECAB1-206ENST00000523962 KIAA0586Q9BVV6 1533 aa17.21■□□□□ 0.34
NECAB1-206ENST00000523962 KDM4FA0A1W2PPD8 638 aa17.2■□□□□ 0.34
NECAB1-206ENST00000523962 RUSC2Q8N2Y8 1516 aa17.2■□□□□ 0.34
NECAB1-206ENST00000523962 TTBK1Q5TCY1 1321 aaPredicted RBP17.19■□□□□ 0.34
NECAB1-206ENST00000523962 DIP2BQ9P265 1576 aa17.16■□□□□ 0.34
NECAB1-206ENST00000523962 PTPRGP23470 1445 aa17.16■□□□□ 0.34
NECAB1-206ENST00000523962 ADCY10Q96PN6 1610 aa17.16■□□□□ 0.34
NECAB1-206ENST00000523962 KIF27Q86VH2 1401 aa17.15■□□□□ 0.34
NECAB1-206ENST00000523962 KDM6BO15054 1643 aa17.1■□□□□ 0.33
NECAB1-206ENST00000523962 CARMIL1Q5VZK9 1371 aa17.1■□□□□ 0.33
NECAB1-206ENST00000523962 CARMIL2Q6F5E8 1435 aa17.08■□□□□ 0.32
NECAB1-206ENST00000523962 TNIKQ9UKE5 1360 aa17.08■□□□□ 0.32
NECAB1-206ENST00000523962 TSPOAP1O95153 1857 aa17.04■□□□□ 0.32
NECAB1-206ENST00000523962 CUL7Q14999 1698 aa17.04■□□□□ 0.32
NECAB1-206ENST00000523962 ABCC2Q92887 1545 aa17.03■□□□□ 0.32
NECAB1-206ENST00000523962 ASXL2Q76L83 1435 aa17.03■□□□□ 0.32
NECAB1-206ENST00000523962 PLB1Q6P1J6 1458 aa17.02■□□□□ 0.32
NECAB1-206ENST00000523962 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17■□□□□ 0.31
NECAB1-206ENST00000523962 UACAQ9BZF9 1416 aa16.98■□□□□ 0.31
NECAB1-206ENST00000523962 ILDR1Q86SU0 546 aaPredicted RBP16.98■□□□□ 0.31
NECAB1-206ENST00000523962 UHRF1BP1LA0JNW5 1464 aa16.96■□□□□ 0.31
NECAB1-206ENST00000523962 GLI2P10070 1586 aa16.94■□□□□ 0.3
NECAB1-206ENST00000523962 NPM3O75607 178 aaKnown RBP16.93■□□□□ 0.3
NECAB1-206ENST00000523962 IQGAP2Q13576 1575 aa16.93■□□□□ 0.3
NECAB1-206ENST00000523962 COL17A1Q9UMD9 1497 aaPredicted RBP16.91■□□□□ 0.3
NECAB1-206ENST00000523962 DISP1Q96F81 1524 aa16.91■□□□□ 0.3
NECAB1-206ENST00000523962 ADGRL1O94910 1474 aa16.9■□□□□ 0.3
NECAB1-206ENST00000523962 EPRSP07814 1512 aaKnown RBP16.9■□□□□ 0.3
NECAB1-206ENST00000523962 KDM5BQ9UGL1 1544 aa16.88■□□□□ 0.29
NECAB1-206ENST00000523962 PPRC1Q5VV67 1664 aaKnown RBP16.87■□□□□ 0.29
NECAB1-206ENST00000523962 TEX14Q8IWB6 1497 aa16.86■□□□□ 0.29
NECAB1-206ENST00000523962 RAPGEF2Q9Y4G8 1499 aa16.86■□□□□ 0.29
NECAB1-206ENST00000523962 UGGT2Q9NYU1 1516 aa16.84■□□□□ 0.29
NECAB1-206ENST00000523962 KCNH8Q96L42 1107 aa16.83■□□□□ 0.28
NECAB1-206ENST00000523962 MAP3K4Q9Y6R4 1608 aa16.79■□□□□ 0.28
NECAB1-206ENST00000523962 WDR7Q9Y4E6 1490 aa16.79■□□□□ 0.28
NECAB1-206ENST00000523962 ZCCHC11Q5TAX3 1644 aaKnown RBP16.78■□□□□ 0.28
NECAB1-206ENST00000523962 CD109Q6YHK3 1445 aa16.78■□□□□ 0.28
NECAB1-206ENST00000523962 KIAA0556O60303 1618 aa16.77■□□□□ 0.27
NECAB1-206ENST00000523962 FAM9AQ8IZU1 332 aaPredicted RBP16.74■□□□□ 0.27
NECAB1-206ENST00000523962 GOLGA3Q08378 1498 aa16.72■□□□□ 0.27
NECAB1-206ENST00000523962 HECW2Q9P2P5 1572 aa16.72■□□□□ 0.27
NECAB1-206ENST00000523962 MAGI3Q5TCQ9 1506 aa16.71■□□□□ 0.27
NECAB1-206ENST00000523962 ARID3CA6NKF2 412 aa16.68■□□□□ 0.26
NECAB1-206ENST00000523962 P3H3Q8IVL6 736 aa16.67■□□□□ 0.26
NECAB1-206ENST00000523962 ABCA8O94911 1581 aa16.65■□□□□ 0.26
NECAB1-206ENST00000523962 CFAP43Q8NDM7 1665 aa16.62■□□□□ 0.25
NECAB1-206ENST00000523962 U3KPZ7 1027 aaPredicted RBP16.62■□□□□ 0.25
NECAB1-206ENST00000523962 PRXQ9BXM0 1461 aa16.61■□□□□ 0.25
NECAB1-206ENST00000523962 ATP10BO94823 1461 aa16.6■□□□□ 0.25
NECAB1-206ENST00000523962 ARAP3Q8WWN8 1544 aa16.6■□□□□ 0.25
NECAB1-206ENST00000523962 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.59■□□□□ 0.25
NECAB1-206ENST00000523962 RAPGEF3O95398 923 aa16.59■□□□□ 0.25
NECAB1-206ENST00000523962 HNRNPUL2Q1KMD3 747 aaKnown RBP16.59■□□□□ 0.25
NECAB1-206ENST00000523962 PHLDB1Q86UU1 1377 aa16.59■□□□□ 0.25
NECAB1-206ENST00000523962 CTTNBP2Q8WZ74 1663 aa16.58■□□□□ 0.24
NECAB1-206ENST00000523962 FBXO41Q8TF61 875 aa16.57■□□□□ 0.24
NECAB1-206ENST00000523962 ARID4BQ4LE39 1312 aaPredicted RBP16.55■□□□□ 0.24
NECAB1-206ENST00000523962 KIF21BO75037 1637 aa16.53■□□□□ 0.24
NECAB1-206ENST00000523962 CSRNP3Q8WYN3 585 aa16.52■□□□□ 0.24
NECAB1-206ENST00000523962 PTPRMP28827 1452 aa16.51■□□□□ 0.23
NECAB1-206ENST00000523962 NEO1Q92859 1461 aa16.48■□□□□ 0.23
NECAB1-206ENST00000523962 PLEKHD1A6NEE1 506 aa16.48■□□□□ 0.23
NECAB1-206ENST00000523962 RANGAP1P46060 587 aaPredicted RBP16.48■□□□□ 0.23
NECAB1-206ENST00000523962 ABCA9Q8IUA7 1624 aa16.47■□□□□ 0.23
NECAB1-206ENST00000523962 CAPN15O75808 1086 aa16.45■□□□□ 0.22
NECAB1-206ENST00000523962 ADAMTSL3P82987 1691 aa16.43■□□□□ 0.22
NECAB1-206ENST00000523962 DSG3P32926 999 aa16.43■□□□□ 0.22
NECAB1-206ENST00000523962 SPINK5Q9NQ38 1064 aaPredicted RBP16.43■□□□□ 0.22
NECAB1-206ENST00000523962 RAPGEF6Q8TEU7 1601 aa16.41■□□□□ 0.22
NECAB1-206ENST00000523962 DENND4BO75064 1496 aaPredicted RBP16.4■□□□□ 0.22
NECAB1-206ENST00000523962 NUP153P49790 1475 aaKnown RBP16.39■□□□□ 0.21
NECAB1-206ENST00000523962 SAMD9Q5K651 1589 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms