RNA–Protein interactions for RNA: ENST00000523637.2

MSRA-209, Transcript of methionine sulfoxide reductase A, humanhuman

TSL 2

Gene MSRA, Length 1,092 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRA-209ENST00000523637 RNF39Q9H2S5 420 aa14.16□□□□□ -0.14
MSRA-209ENST00000523637 GRIN2BQ13224 1484 aa14.16□□□□□ -0.14
MSRA-209ENST00000523637 ADGRL1O94910 1474 aa14.13□□□□□ -0.15
MSRA-209ENST00000523637 ABCC10Q5T3U5 1492 aa14.13□□□□□ -0.15
MSRA-209ENST00000523637 WDR97A6NE52 1622 aa14.13□□□□□ -0.15
MSRA-209ENST00000523637 SOCS7O14512 581 aa14.1□□□□□ -0.15
MSRA-209ENST00000523637 CCDC88BA6NC98 1476 aa14.1□□□□□ -0.15
MSRA-209ENST00000523637 CEP170Q5SW79 1584 aa14.06□□□□□ -0.16
MSRA-209ENST00000523637 NPM1P06748 294 aaKnown RBP eCLIP14.05□□□□□ -0.16
MSRA-209ENST00000523637 FGD5Q6ZNL6 1462 aa14.05□□□□□ -0.16
MSRA-209ENST00000523637 DIP2BQ9P265 1576 aa14.04□□□□□ -0.16
MSRA-209ENST00000523637 ILDR2Q71H61 639 aa14.02□□□□□ -0.17
MSRA-209ENST00000523637 DCAF8L1A6NGE4 600 aa14□□□□□ -0.17
MSRA-209ENST00000523637 MAPKBP1O60336 1514 aa14□□□□□ -0.17
MSRA-209ENST00000523637 GRIN2AQ12879 1464 aa13.98□□□□□ -0.17
MSRA-209ENST00000523637 NUP160Q12769 1436 aa13.96□□□□□ -0.18
MSRA-209ENST00000523637 DISP3Q9P2K9 1392 aa13.95□□□□□ -0.18
MSRA-209ENST00000523637 PBRM1Q86U86 1689 aa13.95□□□□□ -0.18
MSRA-209ENST00000523637 SHROOM2Q13796 1616 aa13.93□□□□□ -0.18
MSRA-209ENST00000523637 PRG4Q92954 1404 aaPredicted RBP13.93□□□□□ -0.18
MSRA-209ENST00000523637 TSPOAP1O95153 1857 aa13.92□□□□□ -0.18
MSRA-209ENST00000523637 C1QBPQ07021 282 aaKnown RBP13.89□□□□□ -0.19
MSRA-209ENST00000523637 CUX1P39880 1505 aa13.86□□□□□ -0.19
MSRA-209ENST00000523637 JPH4Q96JJ6 628 aa13.85□□□□□ -0.19
MSRA-209ENST00000523637 ABCA5Q8WWZ7 1642 aa13.83□□□□□ -0.2
MSRA-209ENST00000523637 ADCY10Q96PN6 1610 aa13.82□□□□□ -0.2
MSRA-209ENST00000523637 ADAMTS12P58397 1594 aa13.82□□□□□ -0.2
MSRA-209ENST00000523637 ABCA10Q8WWZ4 1543 aa13.81□□□□□ -0.2
MSRA-209ENST00000523637 HOXD11P31277 338 aaPredicted RBP13.8□□□□□ -0.2
MSRA-209ENST00000523637 COL17A1Q9UMD9 1497 aaPredicted RBP13.8□□□□□ -0.2
MSRA-209ENST00000523637 FHAD1B1AJZ9 1412 aa13.79□□□□□ -0.2
MSRA-209ENST00000523637 TOP2BQ02880 1626 aa13.79□□□□□ -0.2
MSRA-209ENST00000523637 PPRC1Q5VV67 1664 aaKnown RBP13.73□□□□□ -0.21
MSRA-209ENST00000523637 POTEHQ6S545 545 aa13.71□□□□□ -0.21
MSRA-209ENST00000523637 CERKQ8TCT0 537 aa13.7□□□□□ -0.22
MSRA-209ENST00000523637 GLI2P10070 1586 aa13.7□□□□□ -0.22
MSRA-209ENST00000523637 SPATA31D1Q6ZQQ2 1576 aa13.68□□□□□ -0.22
MSRA-209ENST00000523637 ASXL2Q76L83 1435 aa13.68□□□□□ -0.22
MSRA-209ENST00000523637 PLB1Q6P1J6 1458 aa13.67□□□□□ -0.22
MSRA-209ENST00000523637 TEX14Q8IWB6 1497 aa13.67□□□□□ -0.22
MSRA-209ENST00000523637 RUSC2Q8N2Y8 1516 aa13.64□□□□□ -0.23
MSRA-209ENST00000523637 TTBK1Q5TCY1 1321 aaPredicted RBP13.63□□□□□ -0.23
MSRA-209ENST00000523637 ABCC2Q92887 1545 aa13.62□□□□□ -0.23
MSRA-209ENST00000523637 PTPRMP28827 1452 aa13.61□□□□□ -0.23
MSRA-209ENST00000523637 ERICH3Q5RHP9 1530 aa13.61□□□□□ -0.23
MSRA-209ENST00000523637 WRNQ14191 1432 aaPredicted RBP eCLIP13.61□□□□□ -0.23
MSRA-209ENST00000523637 PCF11O94913 1555 aaKnown RBP13.61□□□□□ -0.23
MSRA-209ENST00000523637 PTPRGP23470 1445 aa13.6□□□□□ -0.23
MSRA-209ENST00000523637 EPRSP07814 1512 aaKnown RBP13.59□□□□□ -0.23
MSRA-209ENST00000523637 MAP3K4Q9Y6R4 1608 aa13.56□□□□□ -0.24
MSRA-209ENST00000523637 KIF21BO75037 1637 aa13.54□□□□□ -0.24
MSRA-209ENST00000523637 HSPA2P54652 639 aa13.54□□□□□ -0.24
MSRA-209ENST00000523637 KIAA0586Q9BVV6 1533 aa13.51□□□□□ -0.25
MSRA-209ENST00000523637 TNIKQ9UKE5 1360 aa13.48□□□□□ -0.25
MSRA-209ENST00000523637 CUL7Q14999 1698 aa13.48□□□□□ -0.25
MSRA-209ENST00000523637 UHRF1BP1LA0JNW5 1464 aa13.48□□□□□ -0.25
MSRA-209ENST00000523637 ADAMTSL3P82987 1691 aa13.47□□□□□ -0.25
MSRA-209ENST00000523637 UACAQ9BZF9 1416 aa13.46□□□□□ -0.26
MSRA-209ENST00000523637 RNF216Q9NWF9 866 aaPredicted RBP13.44□□□□□ -0.26
MSRA-209ENST00000523637 CARMIL2Q6F5E8 1435 aa13.44□□□□□ -0.26
MSRA-209ENST00000523637 CD109Q6YHK3 1445 aa13.42□□□□□ -0.26
MSRA-209ENST00000523637 MAGI3Q5TCQ9 1506 aa13.42□□□□□ -0.26
MSRA-209ENST00000523637 KDM5BQ9UGL1 1544 aa13.42□□□□□ -0.26
MSRA-209ENST00000523637 ARID4BQ4LE39 1312 aaPredicted RBP13.41□□□□□ -0.26
MSRA-209ENST00000523637 MADDQ8WXG6 1647 aa13.39□□□□□ -0.27
MSRA-209ENST00000523637 PPP4R3CPQ6ZMV5 832 aa13.39□□□□□ -0.27
MSRA-209ENST00000523637 WDR7Q9Y4E6 1490 aa13.38□□□□□ -0.27
MSRA-209ENST00000523637 ZCCHC11Q5TAX3 1644 aaKnown RBP13.35□□□□□ -0.27
MSRA-209ENST00000523637 KCNH8Q96L42 1107 aa13.35□□□□□ -0.27
MSRA-209ENST00000523637 BIVM-ERCC5R4GMW8 1640 aa13.35□□□□□ -0.27
MSRA-209ENST00000523637 BCORL1Q5H9F3 1711 aa13.34□□□□□ -0.27
MSRA-209ENST00000523637 CNKSR2Q8WXI2 1034 aa13.33□□□□□ -0.28
MSRA-209ENST00000523637 ARAP3Q8WWN8 1544 aa13.33□□□□□ -0.28
MSRA-209ENST00000523637 RIMS1Q86UR5 1692 aaKnown RBP13.3□□□□□ -0.28
MSRA-209ENST00000523637 CFAP43Q8NDM7 1665 aa13.3□□□□□ -0.28
MSRA-209ENST00000523637 RAPGEF3O95398 923 aa13.28□□□□□ -0.28
MSRA-209ENST00000523637 YEATS2Q9ULM3 1422 aa13.28□□□□□ -0.28
MSRA-209ENST00000523637 IGF1RP08069 1367 aa13.26□□□□□ -0.29
MSRA-209ENST00000523637 DISP1Q96F81 1524 aa13.24□□□□□ -0.29
MSRA-209ENST00000523637 PHLDB1Q86UU1 1377 aa13.23□□□□□ -0.29
MSRA-209ENST00000523637 IQGAP2Q13576 1575 aa13.22□□□□□ -0.29
MSRA-209ENST00000523637 IQSEC2Q5JU85 1478 aa13.21□□□□□ -0.3
MSRA-209ENST00000523637 POGZQ7Z3K3 1410 aa13.2□□□□□ -0.3
MSRA-209ENST00000523637 UBAP1LF5GYI3 381 aa13.17□□□□□ -0.3
MSRA-209ENST00000523637 MLECQ14165 292 aa13.17□□□□□ -0.3
MSRA-209ENST00000523637 LTBP4Q8N2S1 1624 aa13.17□□□□□ -0.3
MSRA-209ENST00000523637 MED1Q15648 1581 aaPredicted RBP13.16□□□□□ -0.3
MSRA-209ENST00000523637 PTPRTO14522 1441 aa13.16□□□□□ -0.3
MSRA-209ENST00000523637 CARMIL1Q5VZK9 1371 aa13.16□□□□□ -0.3
MSRA-209ENST00000523637 KIF27Q86VH2 1401 aa13.15□□□□□ -0.3
MSRA-209ENST00000523637 FANCAO15360 1455 aa13.15□□□□□ -0.3
MSRA-209ENST00000523637 ARHGEF40Q8TER5 1519 aa13.14□□□□□ -0.31
MSRA-209ENST00000523637 STRCQ7RTU9 1775 aa13.14□□□□□ -0.31
MSRA-209ENST00000523637 FRMPD1Q5SYB0 1578 aa13.13□□□□□ -0.31
MSRA-209ENST00000523637 NEO1Q92859 1461 aa13.13□□□□□ -0.31
MSRA-209ENST00000523637 KIAA0556O60303 1618 aa13.12□□□□□ -0.31
MSRA-209ENST00000523637 PREX1Q8TCU6 1659 aa13.12□□□□□ -0.31
MSRA-209ENST00000523637 CEBPAP49715 358 aaPredicted RBP13.11□□□□□ -0.31
MSRA-209ENST00000523637 UGGT2Q9NYU1 1516 aa13.11□□□□□ -0.31
MSRA-209ENST00000523637 UHRF1BP1Q6BDS2 1440 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms