RNA–Protein interactions for RNA: ENST00000523054.5

CDKL3-209, Transcript of cyclin dependent kinase like 3, humanhuman

TSL 2 BASIC

Gene CDKL3, Length 1,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3-209ENST00000523054 ERCC6L2Q5T890 1561 aa9.47□□□□□ -0.89
CDKL3-209ENST00000523054 GABBR2O75899 941 aa9.47□□□□□ -0.89
CDKL3-209ENST00000523054 CSRNP3Q8WYN3 585 aa9.47□□□□□ -0.89
CDKL3-209ENST00000523054 ATXN8OSP0DMR3 200 aa9.45□□□□□ -0.9
CDKL3-209ENST00000523054 FBLN2P98095 1184 aa9.45□□□□□ -0.9
CDKL3-209ENST00000523054 CLEC11AQ9Y240 323 aa9.45□□□□□ -0.9
CDKL3-209ENST00000523054 ARAP1Q96P48 1450 aa9.44□□□□□ -0.9
CDKL3-209ENST00000523054 ILDR2Q71H61 639 aa9.42□□□□□ -0.9
CDKL3-209ENST00000523054 LAMC3Q9Y6N6 1575 aa9.4□□□□□ -0.9
CDKL3-209ENST00000523054 NCAPD3P42695 1498 aa9.39□□□□□ -0.91
CDKL3-209ENST00000523054 SSUH2Q9Y2M2 353 aa9.39□□□□□ -0.91
CDKL3-209ENST00000523054 PDS5BQ9NTI5 1447 aa9.38□□□□□ -0.91
CDKL3-209ENST00000523054 WDR62O43379 1518 aa9.37□□□□□ -0.91
CDKL3-209ENST00000523054 MRC2Q9UBG0 1479 aa9.36□□□□□ -0.91
CDKL3-209ENST00000523054 KDM4FA0A1W2PPD8 638 aa9.35□□□□□ -0.91
CDKL3-209ENST00000523054 DISP3Q9P2K9 1392 aa9.34□□□□□ -0.91
CDKL3-209ENST00000523054 ZNF692Q9BU19 519 aaPredicted RBP9.34□□□□□ -0.91
CDKL3-209ENST00000523054 MKRN4PQ13434 485 aaPredicted RBP9.33□□□□□ -0.92
CDKL3-209ENST00000523054 CHADLQ6NUI6 762 aa9.32□□□□□ -0.92
CDKL3-209ENST00000523054 HECW2Q9P2P5 1572 aa9.3□□□□□ -0.92
CDKL3-209ENST00000523054 POTEIP0CG38 1075 aa9.27□□□□□ -0.93
CDKL3-209ENST00000523054 HMGXB3Q12766 1538 aa9.26□□□□□ -0.93
CDKL3-209ENST00000523054 PRR29P0C7W0 189 aa9.24□□□□□ -0.93
CDKL3-209ENST00000523054 RSF1Q96T23 1441 aaPredicted RBP9.24□□□□□ -0.93
CDKL3-209ENST00000523054 CLCN6P51797 869 aa9.22□□□□□ -0.93
CDKL3-209ENST00000523054 CD44P16070 742 aaKnown RBP9.21□□□□□ -0.94
CDKL3-209ENST00000523054 ATAD2BQ9ULI0 1458 aa9.2□□□□□ -0.94
CDKL3-209ENST00000523054 SLC24A1O60721 1099 aa9.19□□□□□ -0.94
CDKL3-209ENST00000523054 SYNJ2O15056 1496 aa9.16□□□□□ -0.94
CDKL3-209ENST00000523054 FARP1Q9Y4F1 1045 aaPredicted RBP9.16□□□□□ -0.94
CDKL3-209ENST00000523054 SPATA31D1Q6ZQQ2 1576 aa9.15□□□□□ -0.94
CDKL3-209ENST00000523054 DCAF1Q9Y4B6 1507 aa9.15□□□□□ -0.95
CDKL3-209ENST00000523054 CHD1O14646 1710 aa9.11□□□□□ -0.95
CDKL3-209ENST00000523054 DCBLD2Q96PD2 775 aa9.11□□□□□ -0.95
CDKL3-209ENST00000523054 CEP164Q9UPV0 1460 aa9.1□□□□□ -0.95
CDKL3-209ENST00000523054 ZNF579Q8NAF0 562 aaKnown RBP9.09□□□□□ -0.95
CDKL3-209ENST00000523054 BAZ1BQ9UIG0 1483 aaKnown RBP9.08□□□□□ -0.96
CDKL3-209ENST00000523054 CADPSQ9ULU8 1353 aa9.06□□□□□ -0.96
CDKL3-209ENST00000523054 KIF13AQ9H1H9 1805 aa9.06□□□□□ -0.96
CDKL3-209ENST00000523054 ADGRL1O94910 1474 aa9.05□□□□□ -0.96
CDKL3-209ENST00000523054 SMARCA4P51532 1647 aa9.02□□□□□ -0.96
CDKL3-209ENST00000523054 KDM6BO15054 1643 aa9.02□□□□□ -0.97
CDKL3-209ENST00000523054 ZRANB1Q9UGI0 708 aa9.01□□□□□ -0.97
CDKL3-209ENST00000523054 ZNF608Q9ULD9 1512 aaPredicted RBP9□□□□□ -0.97
CDKL3-209ENST00000523054 OTUD5Q96G74 571 aa9□□□□□ -0.97
CDKL3-209ENST00000523054 RTN4Q9NQC3 1192 aaKnown RBP8.99□□□□□ -0.97
CDKL3-209ENST00000523054 ZCCHC6Q5VYS8 1495 aaKnown RBP8.98□□□□□ -0.97
CDKL3-209ENST00000523054 FANCD2Q9BXW9 1451 aa8.97□□□□□ -0.97
CDKL3-209ENST00000523054 IFT140Q96RY7 1462 aa8.96□□□□□ -0.98
CDKL3-209ENST00000523054 GALR2O43603 387 aaPredicted RBP8.96□□□□□ -0.98
CDKL3-209ENST00000523054 CLASP1Q7Z460 1538 aa8.95□□□□□ -0.98
CDKL3-209ENST00000523054 GAPVD1Q14C86 1478 aa8.95□□□□□ -0.98
CDKL3-209ENST00000523054 EIF4G3O43432 1585 aaKnown RBP8.95□□□□□ -0.98
CDKL3-209ENST00000523054 URB2Q14146 1524 aaKnown RBP8.95□□□□□ -0.98
CDKL3-209ENST00000523054 POTEB2H3BUK9 544 aa8.94□□□□□ -0.98
CDKL3-209ENST00000523054 POTEMA6NI47 508 aa8.94□□□□□ -0.98
CDKL3-209ENST00000523054 CREBZFQ9NS37 354 aa8.94□□□□□ -0.98
CDKL3-209ENST00000523054 POTEGQ6S5H5 508 aa8.9□□□□□ -0.98
CDKL3-209ENST00000523054 SYNJ1O43426 1573 aa8.89□□□□□ -0.99
CDKL3-209ENST00000523054 STAG3Q9UJ98 1225 aa8.88□□□□□ -0.99
CDKL3-209ENST00000523054 CERKQ8TCT0 537 aa8.86□□□□□ -0.99
CDKL3-209ENST00000523054 PCDH10Q9P2E7 1040 aa8.86□□□□□ -0.99
CDKL3-209ENST00000523054 PAK3O75914 559 aaPredicted RBP8.86□□□□□ -0.99
CDKL3-209ENST00000523054 PEG3Q9GZU2 1588 aa8.86□□□□□ -0.99
CDKL3-209ENST00000523054 FAM69CQ0P6D2 419 aa8.85□□□□□ -0.99
CDKL3-209ENST00000523054 PHF12Q96QT6 1004 aa8.84□□□□□ -0.99
CDKL3-209ENST00000523054 PELP1Q8IZL8 1130 aaKnown RBP8.83□□□□□ -1
CDKL3-209ENST00000523054 ABCC10Q5T3U5 1492 aa8.82□□□□□ -1
CDKL3-209ENST00000523054 TOP2BQ02880 1626 aa8.82□□□□□ -1
CDKL3-209ENST00000523054 AMER1Q5JTC6 1135 aaPredicted RBP8.81□□□□□ -1
CDKL3-209ENST00000523054 TSPOAP1O95153 1857 aa8.79□□□□□ -1
CDKL3-209ENST00000523054 AQRO60306 1485 aaKnown RBP eCLIP8.79□□□□□ -1
CDKL3-209ENST00000523054 DIP2BQ9P265 1576 aa8.78□□□□□ -1
CDKL3-209ENST00000523054 ASTLQ6HA08 431 aaPredicted RBP8.78□□□□□ -1
CDKL3-209ENST00000523054 METRNQ9UJH8 293 aa8.78□□□□□ -1
CDKL3-209ENST00000523054 NPM1P06748 294 aaKnown RBP eCLIP8.76□□□□□ -1.01
CDKL3-209ENST00000523054 SLC39A7Q92504 469 aa8.76□□□□□ -1.01
CDKL3-209ENST00000523054 POTEJP0CG39 1038 aa8.75□□□□□ -1.01
CDKL3-209ENST00000523054 C7P10643 843 aa8.75□□□□□ -1.01
CDKL3-209ENST00000523054 MAMSTRQ6ZN01 415 aa8.75□□□□□ -1.01
CDKL3-209ENST00000523054 MNX1P50219 401 aaPredicted RBP8.74□□□□□ -1.01
CDKL3-209ENST00000523054 ATMINO43313 823 aaPredicted RBP8.73□□□□□ -1.01
CDKL3-209ENST00000523054 CHMP7Q8WUX9 453 aaPredicted RBP8.73□□□□□ -1.01
CDKL3-209ENST00000523054 MS4A3Q96HJ5 214 aa8.73□□□□□ -1.01
CDKL3-209ENST00000523054 LCE2DQ5TA82 110 aaPredicted RBP8.72□□□□□ -1.01
CDKL3-209ENST00000523054 CFTRP13569 1480 aa8.72□□□□□ -1.01
CDKL3-209ENST00000523054 MAPKBP1O60336 1514 aa8.7□□□□□ -1.02
CDKL3-209ENST00000523054 SNAPC4Q5SXM2 1469 aa8.69□□□□□ -1.02
CDKL3-209ENST00000523054 PCF11O94913 1555 aaKnown RBP8.69□□□□□ -1.02
CDKL3-209ENST00000523054 TARBP1Q13395 1621 aaKnown RBP8.68□□□□□ -1.02
CDKL3-209ENST00000523054 TOPBP1Q92547 1522 aa8.67□□□□□ -1.02
CDKL3-209ENST00000523054 SPDYE4A6NLX3 237 aa8.66□□□□□ -1.02
CDKL3-209ENST00000523054 SCUBE2Q9NQ36 999 aa8.66□□□□□ -1.02
CDKL3-209ENST00000523054 MAGI1Q96QZ7 1491 aaPredicted RBP8.64□□□□□ -1.03
CDKL3-209ENST00000523054 FAM163AQ96GL9 167 aaPredicted RBP8.64□□□□□ -1.03
CDKL3-209ENST00000523054 MROH2BQ7Z745 1585 aa8.64□□□□□ -1.03
CDKL3-209ENST00000523054 PRDM2Q13029 1718 aa8.62□□□□□ -1.03
CDKL3-209ENST00000523054 ATN1P54259 1190 aaPredicted RBP8.62□□□□□ -1.03
CDKL3-209ENST00000523054 ABCC8Q09428 1581 aa8.62□□□□□ -1.03
CDKL3-209ENST00000523054 CEP170Q5SW79 1584 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms