RNA–Protein interactions for RNA: ENST00000522792.1

CTNNA1-236, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-236ENST00000522792 ARHGAP35Q9NRY4 1499 aa24.31■■□□□ 1.48
CTNNA1-236ENST00000522792 PHF23Q9BUL5 403 aaPredicted RBP24.3■■□□□ 1.48
CTNNA1-236ENST00000522792 VPS8Q8N3P4 1428 aa24.28■■□□□ 1.48
CTNNA1-236ENST00000522792 PPARGC1BQ86YN6 1023 aaKnown RBP24.26■■□□□ 1.47
CTNNA1-236ENST00000522792 GRIN2AQ12879 1464 aa24.25■■□□□ 1.47
CTNNA1-236ENST00000522792 SYNJ2O15056 1496 aa24.24■■□□□ 1.47
CTNNA1-236ENST00000522792 CHMP7Q8WUX9 453 aaPredicted RBP24.22■■□□□ 1.47
CTNNA1-236ENST00000522792 FBLN2P98095 1184 aa24.22■■□□□ 1.47
CTNNA1-236ENST00000522792 P3H3Q8IVL6 736 aa24.19■■□□□ 1.46
CTNNA1-236ENST00000522792 EFCAB5A4FU69 1503 aa24.16■■□□□ 1.46
CTNNA1-236ENST00000522792 IQGAP2Q13576 1575 aa24.16■■□□□ 1.46
CTNNA1-236ENST00000522792 FHOD3Q2V2M9 1422 aa24.13■■□□□ 1.45
CTNNA1-236ENST00000522792 CEP170Q5SW79 1584 aa24.12■■□□□ 1.45
CTNNA1-236ENST00000522792 TTBK1Q5TCY1 1321 aaPredicted RBP24.11■■□□□ 1.45
CTNNA1-236ENST00000522792 SAMD9Q5K651 1589 aa24.1■■□□□ 1.45
CTNNA1-236ENST00000522792 PCGF6Q9BYE7 350 aa24.1■■□□□ 1.45
CTNNA1-236ENST00000522792 KIAA0586Q9BVV6 1533 aa24.09■■□□□ 1.45
CTNNA1-236ENST00000522792 TRIM26Q12899 539 aaPredicted RBP24.06■■□□□ 1.44
CTNNA1-236ENST00000522792 APLP2Q06481 763 aa24.05■■□□□ 1.44
CTNNA1-236ENST00000522792 NUP160Q12769 1436 aa24.05■■□□□ 1.44
CTNNA1-236ENST00000522792 CHD1O14646 1710 aa24.05■■□□□ 1.44
CTNNA1-236ENST00000522792 UGGT2Q9NYU1 1516 aa24.01■■□□□ 1.43
CTNNA1-236ENST00000522792 PCF11O94913 1555 aaKnown RBP23.99■■□□□ 1.43
CTNNA1-236ENST00000522792 SENP3Q9H4L4 574 aaPredicted RBP23.96■■□□□ 1.43
CTNNA1-236ENST00000522792 FMN1Q68DA7 1419 aa23.95■■□□□ 1.42
CTNNA1-236ENST00000522792 ATP1B4Q9UN42 357 aaPredicted RBP23.93■■□□□ 1.42
CTNNA1-236ENST00000522792 DISP1Q96F81 1524 aa23.93■■□□□ 1.42
CTNNA1-236ENST00000522792 KIAA0556O60303 1618 aa23.93■■□□□ 1.42
CTNNA1-236ENST00000522792 CASKIN1Q8WXD9 1431 aa23.9■■□□□ 1.42
CTNNA1-236ENST00000522792 FYCO1Q9BQS8 1478 aa23.89■■□□□ 1.42
CTNNA1-236ENST00000522792 JPH4Q96JJ6 628 aa23.89■■□□□ 1.41
CTNNA1-236ENST00000522792 KANK4Q5T7N3 995 aaPredicted RBP23.88■■□□□ 1.41
CTNNA1-236ENST00000522792 TIAM1Q13009 1591 aa23.86■■□□□ 1.41
CTNNA1-236ENST00000522792 CFAP43Q8NDM7 1665 aa23.81■■□□□ 1.4
CTNNA1-236ENST00000522792 MAP3K1Q13233 1512 aa23.81■■□□□ 1.4
CTNNA1-236ENST00000522792 CARMIL2Q6F5E8 1435 aa23.8■■□□□ 1.4
CTNNA1-236ENST00000522792 LRRIQ1Q96JM4 1722 aa23.77■■□□□ 1.4
CTNNA1-236ENST00000522792 PRG4Q92954 1404 aaPredicted RBP23.76■■□□□ 1.39
CTNNA1-236ENST00000522792 LRRC9Q6ZRR7 1453 aa23.75■■□□□ 1.39
CTNNA1-236ENST00000522792 HECW1Q76N89 1606 aa23.74■■□□□ 1.39
CTNNA1-236ENST00000522792 SHROOM2Q13796 1616 aa23.73■■□□□ 1.39
CTNNA1-236ENST00000522792 CLASP1Q7Z460 1538 aa23.73■■□□□ 1.39
CTNNA1-236ENST00000522792 ARID3CA6NKF2 412 aa23.68■■□□□ 1.38
CTNNA1-236ENST00000522792 RAPGEF6Q8TEU7 1601 aa23.68■■□□□ 1.38
CTNNA1-236ENST00000522792 CCDC18Q5T9S5 1454 aa23.65■■□□□ 1.38
CTNNA1-236ENST00000522792 PLB1Q6P1J6 1458 aa23.65■■□□□ 1.38
CTNNA1-236ENST00000522792 EPRSP07814 1512 aaKnown RBP23.65■■□□□ 1.38
CTNNA1-236ENST00000522792 ERCC6L2Q5T890 1561 aa23.65■■□□□ 1.38
CTNNA1-236ENST00000522792 CDK13Q14004 1512 aaKnown RBP23.64■■□□□ 1.38
CTNNA1-236ENST00000522792 NUP153P49790 1475 aaKnown RBP23.62■■□□□ 1.37
CTNNA1-236ENST00000522792 MTUS2Q5JR59 1369 aa23.61■■□□□ 1.37
CTNNA1-236ENST00000522792 PTPRGP23470 1445 aa23.59■■□□□ 1.37
CTNNA1-236ENST00000522792 MAGI3Q5TCQ9 1506 aa23.58■■□□□ 1.37
CTNNA1-236ENST00000522792 ABCA8O94911 1581 aa23.57■■□□□ 1.36
CTNNA1-236ENST00000522792 EHBP1L1Q8N3D4 1523 aa23.55■■□□□ 1.36
CTNNA1-236ENST00000522792 PHLDB1Q86UU1 1377 aa23.55■■□□□ 1.36
CTNNA1-236ENST00000522792 OSCARQ8IYS5 282 aa23.54■■□□□ 1.36
CTNNA1-236ENST00000522792 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.53■■□□□ 1.36
CTNNA1-236ENST00000522792 HNRNPUL2Q1KMD3 747 aaKnown RBP23.53■■□□□ 1.36
CTNNA1-236ENST00000522792 RRBP1Q9P2E9 1410 aaKnown RBP23.52■■□□□ 1.36
CTNNA1-236ENST00000522792 SUPT6HQ7KZ85 1726 aaKnown RBP23.49■■□□□ 1.35
CTNNA1-236ENST00000522792 CCNB3Q8WWL7 1395 aa23.48■■□□□ 1.35
CTNNA1-236ENST00000522792 NCOA2Q15596 1464 aa23.47■■□□□ 1.35
CTNNA1-236ENST00000522792 UACAQ9BZF9 1416 aa23.45■■□□□ 1.34
CTNNA1-236ENST00000522792 ATP10BO94823 1461 aa23.42■■□□□ 1.34
CTNNA1-236ENST00000522792 CDK11AQ9UQ88 783 aaPredicted RBP23.42■■□□□ 1.34
CTNNA1-236ENST00000522792 ARHGEF11O15085 1522 aa23.4■■□□□ 1.34
CTNNA1-236ENST00000522792 ABCC2Q92887 1545 aa23.38■■□□□ 1.33
CTNNA1-236ENST00000522792 FAM50AQ14320 339 aaKnown RBP23.37■■□□□ 1.33
CTNNA1-236ENST00000522792 TROQ12816 1431 aaPredicted RBP23.37■■□□□ 1.33
CTNNA1-236ENST00000522792 MYOM3Q5VTT5 1437 aa23.36■■□□□ 1.33
CTNNA1-236ENST00000522792 FGD6Q6ZV73 1430 aa23.36■■□□□ 1.33
CTNNA1-236ENST00000522792 ITGAEP38570 1179 aa23.36■■□□□ 1.33
CTNNA1-236ENST00000522792 PLEKHD1A6NEE1 506 aa23.32■■□□□ 1.32
CTNNA1-236ENST00000522792 KIF14Q15058 1648 aa23.31■■□□□ 1.32
CTNNA1-236ENST00000522792 UHRF1BP1LA0JNW5 1464 aa23.29■■□□□ 1.32
CTNNA1-236ENST00000522792 ADCY10Q96PN6 1610 aa23.29■■□□□ 1.32
CTNNA1-236ENST00000522792 HRCP23327 699 aa23.28■■□□□ 1.32
CTNNA1-236ENST00000522792 PTPN23Q9H3S7 1636 aa23.26■■□□□ 1.31
CTNNA1-236ENST00000522792 ZCCHC11Q5TAX3 1644 aaKnown RBP23.25■■□□□ 1.31
CTNNA1-236ENST00000522792 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.24■■□□□ 1.31
CTNNA1-236ENST00000522792 KDM5BQ9UGL1 1544 aa23.21■■□□□ 1.31
CTNNA1-236ENST00000522792 MIA2Q96PC5 1412 aa23.2■■□□□ 1.31
CTNNA1-236ENST00000522792 TCOF1Q13428 1488 aaKnown RBP23.19■■□□□ 1.3
CTNNA1-236ENST00000522792 CCER1Q8TC90 406 aaPredicted RBP23.17■■□□□ 1.3
CTNNA1-236ENST00000522792 ABCC10Q5T3U5 1492 aa23.17■■□□□ 1.3
CTNNA1-236ENST00000522792 ITSN2Q9NZM3 1697 aa23.17■■□□□ 1.3
CTNNA1-236ENST00000522792 GPATCH8Q9UKJ3 1502 aaKnown RBP23.17■■□□□ 1.3
CTNNA1-236ENST00000522792 CDC42BPAQ5VT25 1732 aa23.12■■□□□ 1.29
CTNNA1-236ENST00000522792 ZNF644Q9H582 1327 aaPredicted RBP23.12■■□□□ 1.29
CTNNA1-236ENST00000522792 CFDP1Q9UEE9 299 aaPredicted RBP23.12■■□□□ 1.29
CTNNA1-236ENST00000522792 PTPRKQ15262 1439 aa23.11■■□□□ 1.29
CTNNA1-236ENST00000522792 KCNH8Q96L42 1107 aa23.11■■□□□ 1.29
CTNNA1-236ENST00000522792 ZNF777Q9ULD5 760 aaPredicted RBP23.09■■□□□ 1.29
CTNNA1-236ENST00000522792 TTC37Q6PGP7 1564 aa23.08■■□□□ 1.29
CTNNA1-236ENST00000522792 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.08■■□□□ 1.28
CTNNA1-236ENST00000522792 CAMSAP2Q08AD1 1489 aa23.08■■□□□ 1.28
CTNNA1-236ENST00000522792 RIMBP3CA6NJZ7 1639 aa23.07■■□□□ 1.28
CTNNA1-236ENST00000522792 RIMBP3BA6NNM3 1639 aa23.07■■□□□ 1.28
CTNNA1-236ENST00000522792 RIMBP3Q9UFD9 1639 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms