RNA–Protein interactions for RNA: ENST00000522621.1

CLVS1-208, Transcript of clavesin 1, humanhuman

TSL 4

Gene CLVS1, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLVS1-208ENST00000522621 MAGI1Q96QZ7 1491 aaPredicted RBP8.63□□□□□ -1.03
CLVS1-208ENST00000522621 P3H3Q8IVL6 736 aa8.62□□□□□ -1.03
CLVS1-208ENST00000522621 EFCAB5A4FU69 1503 aa8.62□□□□□ -1.03
CLVS1-208ENST00000522621 PBRM1Q86U86 1689 aa8.62□□□□□ -1.03
CLVS1-208ENST00000522621 FMN1Q68DA7 1419 aa8.62□□□□□ -1.03
CLVS1-208ENST00000522621 ZNF608Q9ULD9 1512 aaPredicted RBP8.6□□□□□ -1.03
CLVS1-208ENST00000522621 TTBK1Q5TCY1 1321 aaPredicted RBP8.6□□□□□ -1.03
CLVS1-208ENST00000522621 ARHGAP35Q9NRY4 1499 aa8.6□□□□□ -1.03
CLVS1-208ENST00000522621 ZEB1P37275 1124 aaPredicted RBP8.6□□□□□ -1.03
CLVS1-208ENST00000522621 CTTNBP2Q8WZ74 1663 aa8.59□□□□□ -1.03
CLVS1-208ENST00000522621 SYNJ2O15056 1496 aa8.58□□□□□ -1.04
CLVS1-208ENST00000522621 SNAPC4Q5SXM2 1469 aa8.58□□□□□ -1.04
CLVS1-208ENST00000522621 EIF4G3O43432 1585 aaKnown RBP8.58□□□□□ -1.04
CLVS1-208ENST00000522621 ARAP1Q96P48 1450 aa8.57□□□□□ -1.04
CLVS1-208ENST00000522621 ADAMTS12P58397 1594 aa8.57□□□□□ -1.04
CLVS1-208ENST00000522621 KIAA0586Q9BVV6 1533 aa8.57□□□□□ -1.04
CLVS1-208ENST00000522621 CARMIL2Q6F5E8 1435 aa8.56□□□□□ -1.04
CLVS1-208ENST00000522621 CDK11AQ9UQ88 783 aaPredicted RBP8.56□□□□□ -1.04
CLVS1-208ENST00000522621 GRIN2AQ12879 1464 aa8.56□□□□□ -1.04
CLVS1-208ENST00000522621 IQGAP2Q13576 1575 aa8.55□□□□□ -1.04
CLVS1-208ENST00000522621 MAP3K1Q13233 1512 aa8.54□□□□□ -1.04
CLVS1-208ENST00000522621 JPH4Q96JJ6 628 aa8.54□□□□□ -1.04
CLVS1-208ENST00000522621 CASKIN1Q8WXD9 1431 aa8.54□□□□□ -1.04
CLVS1-208ENST00000522621 FYCO1Q9BQS8 1478 aa8.52□□□□□ -1.05
CLVS1-208ENST00000522621 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.52□□□□□ -1.05
CLVS1-208ENST00000522621 HNRNPUL2Q1KMD3 747 aaKnown RBP8.52□□□□□ -1.05
CLVS1-208ENST00000522621 FHOD3Q2V2M9 1422 aa8.52□□□□□ -1.05
CLVS1-208ENST00000522621 MTUS2Q5JR59 1369 aa8.5□□□□□ -1.05
CLVS1-208ENST00000522621 UGGT2Q9NYU1 1516 aa8.5□□□□□ -1.05
CLVS1-208ENST00000522621 HRCP23327 699 aa8.5□□□□□ -1.05
CLVS1-208ENST00000522621 CCER1Q8TC90 406 aaPredicted RBP8.5□□□□□ -1.05
CLVS1-208ENST00000522621 KANK4Q5T7N3 995 aaPredicted RBP8.49□□□□□ -1.05
CLVS1-208ENST00000522621 SAMD9Q5K651 1589 aa8.48□□□□□ -1.05
CLVS1-208ENST00000522621 CCDC18Q5T9S5 1454 aa8.48□□□□□ -1.05
CLVS1-208ENST00000522621 NUP160Q12769 1436 aa8.47□□□□□ -1.05
CLVS1-208ENST00000522621 TIAM1Q13009 1591 aa8.47□□□□□ -1.05
CLVS1-208ENST00000522621 LRRC9Q6ZRR7 1453 aa8.46□□□□□ -1.05
CLVS1-208ENST00000522621 FAM50AQ14320 339 aaKnown RBP8.45□□□□□ -1.06
CLVS1-208ENST00000522621 CCNB3Q8WWL7 1395 aa8.45□□□□□ -1.06
CLVS1-208ENST00000522621 HECW1Q76N89 1606 aa8.44□□□□□ -1.06
CLVS1-208ENST00000522621 PLEKHD1A6NEE1 506 aa8.44□□□□□ -1.06
CLVS1-208ENST00000522621 PCF11O94913 1555 aaKnown RBP8.44□□□□□ -1.06
CLVS1-208ENST00000522621 OSCARQ8IYS5 282 aa8.43□□□□□ -1.06
CLVS1-208ENST00000522621 PTPRGP23470 1445 aa8.43□□□□□ -1.06
CLVS1-208ENST00000522621 CEP170Q5SW79 1584 aa8.43□□□□□ -1.06
CLVS1-208ENST00000522621 ACIN1Q9UKV3 1341 aaKnown RBP8.42□□□□□ -1.06
CLVS1-208ENST00000522621 PRG4Q92954 1404 aaPredicted RBP8.42□□□□□ -1.06
CLVS1-208ENST00000522621 KIAA0556O60303 1618 aa8.42□□□□□ -1.06
CLVS1-208ENST00000522621 DISP1Q96F81 1524 aa8.41□□□□□ -1.06
CLVS1-208ENST00000522621 ITGAEP38570 1179 aa8.41□□□□□ -1.06
CLVS1-208ENST00000522621 RRBP1Q9P2E9 1410 aaKnown RBP8.4□□□□□ -1.06
CLVS1-208ENST00000522621 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.4□□□□□ -1.06
CLVS1-208ENST00000522621 CFAP43Q8NDM7 1665 aa8.4□□□□□ -1.07
CLVS1-208ENST00000522621 EPRSP07814 1512 aaKnown RBP8.39□□□□□ -1.07
CLVS1-208ENST00000522621 EHBP1L1Q8N3D4 1523 aa8.39□□□□□ -1.07
CLVS1-208ENST00000522621 ARID3CA6NKF2 412 aa8.38□□□□□ -1.07
CLVS1-208ENST00000522621 CHD1O14646 1710 aa8.37□□□□□ -1.07
CLVS1-208ENST00000522621 SUPT6HQ7KZ85 1726 aaKnown RBP8.37□□□□□ -1.07
CLVS1-208ENST00000522621 RAPGEF6Q8TEU7 1601 aa8.37□□□□□ -1.07
CLVS1-208ENST00000522621 NPM1P06748 294 aaKnown RBP eCLIP8.37□□□□□ -1.07
CLVS1-208ENST00000522621 CLSPNQ9HAW4 1339 aa8.35□□□□□ -1.07
CLVS1-208ENST00000522621 NCOA2Q15596 1464 aa8.35□□□□□ -1.07
CLVS1-208ENST00000522621 MYOM3Q5VTT5 1437 aa8.35□□□□□ -1.07
CLVS1-208ENST00000522621 UACAQ9BZF9 1416 aa8.35□□□□□ -1.07
CLVS1-208ENST00000522621 PHLDB1Q86UU1 1377 aa8.35□□□□□ -1.07
CLVS1-208ENST00000522621 CFDP1Q9UEE9 299 aaPredicted RBP8.34□□□□□ -1.07
CLVS1-208ENST00000522621 MIA2Q96PC5 1412 aa8.34□□□□□ -1.07
CLVS1-208ENST00000522621 PLB1Q6P1J6 1458 aa8.33□□□□□ -1.08
CLVS1-208ENST00000522621 TROQ12816 1431 aaPredicted RBP8.33□□□□□ -1.08
CLVS1-208ENST00000522621 FGD6Q6ZV73 1430 aa8.33□□□□□ -1.08
CLVS1-208ENST00000522621 NUP153P49790 1475 aaKnown RBP8.32□□□□□ -1.08
CLVS1-208ENST00000522621 RSPH4AQ5TD94 716 aa8.32□□□□□ -1.08
CLVS1-208ENST00000522621 SETD5Q9C0A6 1442 aa8.31□□□□□ -1.08
CLVS1-208ENST00000522621 CDK13Q14004 1512 aaKnown RBP8.3□□□□□ -1.08
CLVS1-208ENST00000522621 SHROOM2Q13796 1616 aa8.3□□□□□ -1.08
CLVS1-208ENST00000522621 TSPY4P0CV99 314 aa8.3□□□□□ -1.08
CLVS1-208ENST00000522621 TSPY10P0CW01 314 aa8.3□□□□□ -1.08
CLVS1-208ENST00000522621 ZNF777Q9ULD5 760 aaPredicted RBP8.3□□□□□ -1.08
CLVS1-208ENST00000522621 ABCA8O94911 1581 aa8.3□□□□□ -1.08
CLVS1-208ENST00000522621 ATP10BO94823 1461 aa8.29□□□□□ -1.08
CLVS1-208ENST00000522621 CLASP1Q7Z460 1538 aa8.29□□□□□ -1.08
CLVS1-208ENST00000522621 KCNH8Q96L42 1107 aa8.28□□□□□ -1.08
CLVS1-208ENST00000522621 UHRF1BP1LA0JNW5 1464 aa8.26□□□□□ -1.09
CLVS1-208ENST00000522621 KIF14Q15058 1648 aa8.26□□□□□ -1.09
CLVS1-208ENST00000522621 PTPN23Q9H3S7 1636 aa8.26□□□□□ -1.09
CLVS1-208ENST00000522621 LRRIQ1Q96JM4 1722 aa8.26□□□□□ -1.09
CLVS1-208ENST00000522621 RAB3GAP2Q9H2M9 1393 aa8.25□□□□□ -1.09
CLVS1-208ENST00000522621 ARHGEF11O15085 1522 aa8.25□□□□□ -1.09
CLVS1-208ENST00000522621 ABCC2Q92887 1545 aa8.25□□□□□ -1.09
CLVS1-208ENST00000522621 EFCAB2Q5VUJ9 269 aa8.25□□□□□ -1.09
CLVS1-208ENST00000522621 TRIM52Q96A61 297 aa8.25□□□□□ -1.09
CLVS1-208ENST00000522621 CHIC2Q9UKJ5 165 aa8.25□□□□□ -1.09
CLVS1-208ENST00000522621 TCOF1Q13428 1488 aaKnown RBP8.25□□□□□ -1.09
CLVS1-208ENST00000522621 ITSN2Q9NZM3 1697 aa8.24□□□□□ -1.09
CLVS1-208ENST00000522621 TIMELESSQ9UNS1 1208 aa8.24□□□□□ -1.09
CLVS1-208ENST00000522621 MAGI3Q5TCQ9 1506 aa8.24□□□□□ -1.09
CLVS1-208ENST00000522621 RRP7BPQ9NSQ0 103 aa8.23□□□□□ -1.09
CLVS1-208ENST00000522621 ROCK1Q13464 1354 aa8.22□□□□□ -1.09
CLVS1-208ENST00000522621 ANKRD30AQ9BXX3 1397 aa8.22□□□□□ -1.09
CLVS1-208ENST00000522621 HFM1A2PYH4 1435 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms