RNA–Protein interactions for RNA: ENST00000522610.5

POLB-213, Transcript of DNA polymerase beta, humanhuman

TSL 5

Gene POLB, Length 1,341 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-213ENST00000522610 ARHGEF11O15085 1522 aa20.51■□□□□ 0.87
POLB-213ENST00000522610 ADRA2BP18089 450 aa20.51■□□□□ 0.87
POLB-213ENST00000522610 RIMBP3CA6NJZ7 1639 aa20.5■□□□□ 0.87
POLB-213ENST00000522610 RIMBP3BA6NNM3 1639 aa20.5■□□□□ 0.87
POLB-213ENST00000522610 RIMBP3Q9UFD9 1639 aa20.5■□□□□ 0.87
POLB-213ENST00000522610 CARMIL1Q5VZK9 1371 aa20.48■□□□□ 0.87
POLB-213ENST00000522610 POTEDQ86YR6 584 aa20.4■□□□□ 0.86
POLB-213ENST00000522610 RAPGEF2Q9Y4G8 1499 aa20.38■□□□□ 0.85
POLB-213ENST00000522610 SHROOM2Q13796 1616 aa20.37■□□□□ 0.85
POLB-213ENST00000522610 ARAP1Q96P48 1450 aa20.35■□□□□ 0.85
POLB-213ENST00000522610 PRXQ9BXM0 1461 aa20.35■□□□□ 0.85
POLB-213ENST00000522610 EEA1Q15075 1411 aa20.34■□□□□ 0.85
POLB-213ENST00000522610 ERCC6L2Q5T890 1561 aa20.33■□□□□ 0.85
POLB-213ENST00000522610 KIAA0586Q9BVV6 1533 aa20.33■□□□□ 0.85
POLB-213ENST00000522610 FAM9AQ8IZU1 332 aaPredicted RBP20.28■□□□□ 0.84
POLB-213ENST00000522610 CSRNP3Q8WYN3 585 aa20.28■□□□□ 0.84
POLB-213ENST00000522610 PRG4Q92954 1404 aaPredicted RBP20.28■□□□□ 0.84
POLB-213ENST00000522610 CYB5RLQ6IPT4 315 aa20.27■□□□□ 0.83
POLB-213ENST00000522610 JPH4Q96JJ6 628 aa20.27■□□□□ 0.83
POLB-213ENST00000522610 IQGAP2Q13576 1575 aa20.25■□□□□ 0.83
POLB-213ENST00000522610 CTTNBP2Q8WZ74 1663 aa20.19■□□□□ 0.82
POLB-213ENST00000522610 KIF21BO75037 1637 aa20.16■□□□□ 0.82
POLB-213ENST00000522610 UGGT2Q9NYU1 1516 aa20.13■□□□□ 0.81
POLB-213ENST00000522610 DISP1Q96F81 1524 aa20.1■□□□□ 0.81
POLB-213ENST00000522610 CARMIL2Q6F5E8 1435 aa20.1■□□□□ 0.81
POLB-213ENST00000522610 KIAA0556O60303 1618 aa20.08■□□□□ 0.8
POLB-213ENST00000522610 GOLGA3Q08378 1498 aa20.05■□□□□ 0.8
POLB-213ENST00000522610 EHMT2Q96KQ7 1210 aa20.04■□□□□ 0.8
POLB-213ENST00000522610 TNIKQ9UKE5 1360 aa20.04■□□□□ 0.8
POLB-213ENST00000522610 TTBK1Q5TCY1 1321 aaPredicted RBP20.02■□□□□ 0.8
POLB-213ENST00000522610 PTPRGP23470 1445 aa20.02■□□□□ 0.8
POLB-213ENST00000522610 ADCY10Q96PN6 1610 aa19.98■□□□□ 0.79
POLB-213ENST00000522610 SAMD9Q5K651 1589 aa19.96■□□□□ 0.79
POLB-213ENST00000522610 UBTFP17480 764 aaKnown RBP19.94■□□□□ 0.78
POLB-213ENST00000522610 RANGAP1P46060 587 aaPredicted RBP19.94■□□□□ 0.78
POLB-213ENST00000522610 P3H3Q8IVL6 736 aa19.9■□□□□ 0.78
POLB-213ENST00000522610 UACAQ9BZF9 1416 aa19.9■□□□□ 0.78
POLB-213ENST00000522610 ABCC2Q92887 1545 aa19.89■□□□□ 0.77
POLB-213ENST00000522610 EFCAB5A4FU69 1503 aa19.87■□□□□ 0.77
POLB-213ENST00000522610 UHRF1BP1LA0JNW5 1464 aa19.87■□□□□ 0.77
POLB-213ENST00000522610 PLB1Q6P1J6 1458 aa19.87■□□□□ 0.77
POLB-213ENST00000522610 FHOD3Q2V2M9 1422 aa19.85■□□□□ 0.77
POLB-213ENST00000522610 TRHP20396 242 aaPredicted RBP19.84■□□□□ 0.77
POLB-213ENST00000522610 ABCA8O94911 1581 aa19.83■□□□□ 0.77
POLB-213ENST00000522610 MAPKBP1O60336 1514 aa19.82■□□□□ 0.76
POLB-213ENST00000522610 NPM1P06748 294 aaKnown RBP eCLIP19.82■□□□□ 0.76
POLB-213ENST00000522610 ARHGAP35Q9NRY4 1499 aa19.79■□□□□ 0.76
POLB-213ENST00000522610 KDM5BQ9UGL1 1544 aa19.78■□□□□ 0.76
POLB-213ENST00000522610 ZCCHC11Q5TAX3 1644 aaKnown RBP19.77■□□□□ 0.75
POLB-213ENST00000522610 RAPGEF6Q8TEU7 1601 aa19.74■□□□□ 0.75
POLB-213ENST00000522610 ASXL2Q76L83 1435 aa19.72■□□□□ 0.75
POLB-213ENST00000522610 DIP2BQ9P265 1576 aa19.72■□□□□ 0.75
POLB-213ENST00000522610 ABCC10Q5T3U5 1492 aa19.71■□□□□ 0.75
POLB-213ENST00000522610 KIF13AQ9H1H9 1805 aa19.69■□□□□ 0.74
POLB-213ENST00000522610 NUP153P49790 1475 aaKnown RBP19.69■□□□□ 0.74
POLB-213ENST00000522610 ARID3CA6NKF2 412 aa19.69■□□□□ 0.74
POLB-213ENST00000522610 CLIP1P30622 1438 aa19.68■□□□□ 0.74
POLB-213ENST00000522610 LOC105371045A0A1W2PR82 267 aa19.66■□□□□ 0.74
POLB-213ENST00000522610 FMN1Q68DA7 1419 aa19.66■□□□□ 0.74
POLB-213ENST00000522610 ATP10BO94823 1461 aa19.66■□□□□ 0.74
POLB-213ENST00000522610 FAM69CQ0P6D2 419 aa19.65■□□□□ 0.74
POLB-213ENST00000522610 WDR7Q9Y4E6 1490 aa19.64■□□□□ 0.73
POLB-213ENST00000522610 CEP162Q5TB80 1403 aa19.63■□□□□ 0.73
POLB-213ENST00000522610 EPRSP07814 1512 aaKnown RBP19.61■□□□□ 0.73
POLB-213ENST00000522610 HECW1Q76N89 1606 aa19.59■□□□□ 0.73
POLB-213ENST00000522610 PCF11O94913 1555 aaKnown RBP19.58■□□□□ 0.73
POLB-213ENST00000522610 GLI2P10070 1586 aa19.58■□□□□ 0.73
POLB-213ENST00000522610 CDK13Q14004 1512 aaKnown RBP19.57■□□□□ 0.72
POLB-213ENST00000522610 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.56■□□□□ 0.72
POLB-213ENST00000522610 HNRNPUL2Q1KMD3 747 aaKnown RBP19.56■□□□□ 0.72
POLB-213ENST00000522610 ATP1B4Q9UN42 357 aaPredicted RBP19.54■□□□□ 0.72
POLB-213ENST00000522610 CASKIN1Q8WXD9 1431 aa19.53■□□□□ 0.72
POLB-213ENST00000522610 KCNH8Q96L42 1107 aa19.51■□□□□ 0.71
POLB-213ENST00000522610 MAP3K4Q9Y6R4 1608 aa19.51■□□□□ 0.71
POLB-213ENST00000522610 FYCO1Q9BQS8 1478 aa19.51■□□□□ 0.71
POLB-213ENST00000522610 LRRIQ1Q96JM4 1722 aa19.49■□□□□ 0.71
POLB-213ENST00000522610 TSPOAP1O95153 1857 aa19.49■□□□□ 0.71
POLB-213ENST00000522610 PPRC1Q5VV67 1664 aaKnown RBP19.48■□□□□ 0.71
POLB-213ENST00000522610 CCDC18Q5T9S5 1454 aa19.45■□□□□ 0.7
POLB-213ENST00000522610 CFAP43Q8NDM7 1665 aa19.45■□□□□ 0.7
POLB-213ENST00000522610 PLEKHD1A6NEE1 506 aa19.44■□□□□ 0.7
POLB-213ENST00000522610 ABCA9Q8IUA7 1624 aa19.43■□□□□ 0.7
POLB-213ENST00000522610 CD109Q6YHK3 1445 aa19.43■□□□□ 0.7
POLB-213ENST00000522610 TEX14Q8IWB6 1497 aa19.4■□□□□ 0.7
POLB-213ENST00000522610 MAGI3Q5TCQ9 1506 aa19.39■□□□□ 0.69
POLB-213ENST00000522610 TTC37Q6PGP7 1564 aa19.38■□□□□ 0.69
POLB-213ENST00000522610 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.38■□□□□ 0.69
POLB-213ENST00000522610 TROQ12816 1431 aaPredicted RBP19.37■□□□□ 0.69
POLB-213ENST00000522610 VPS8Q8N3P4 1428 aa19.37■□□□□ 0.69
POLB-213ENST00000522610 CDK11AQ9UQ88 783 aaPredicted RBP19.37■□□□□ 0.69
POLB-213ENST00000522610 KDM6BO15054 1643 aa19.37■□□□□ 0.69
POLB-213ENST00000522610 KIF14Q15058 1648 aa19.36■□□□□ 0.69
POLB-213ENST00000522610 COL17A1Q9UMD9 1497 aaPredicted RBP19.3■□□□□ 0.68
POLB-213ENST00000522610 NEO1Q92859 1461 aa19.26■□□□□ 0.67
POLB-213ENST00000522610 TIAM1Q13009 1591 aa19.25■□□□□ 0.67
POLB-213ENST00000522610 FANCAO15360 1455 aa19.25■□□□□ 0.67
POLB-213ENST00000522610 MYO5CQ9NQX4 1742 aa19.24■□□□□ 0.67
POLB-213ENST00000522610 MTUS2Q5JR59 1369 aa19.24■□□□□ 0.67
POLB-213ENST00000522610 EHBP1L1Q8N3D4 1523 aa19.24■□□□□ 0.67
POLB-213ENST00000522610 PLCH2O75038 1416 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms