RNA–Protein interactions for RNA: ENST00000522514.5

PCMTD1-207, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PCMTD1, Length 1,287 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMTD1-207ENST00000522514 TRIM41Q8WV44 630 aa24.22■■□□□ 1.47
PCMTD1-207ENST00000522514 SHROOM2Q13796 1616 aa24.21■■□□□ 1.47
PCMTD1-207ENST00000522514 CARMIL1Q5VZK9 1371 aa24.15■■□□□ 1.46
PCMTD1-207ENST00000522514 CYB5RLQ6IPT4 315 aa24.07■■□□□ 1.44
PCMTD1-207ENST00000522514 KIAA0586Q9BVV6 1533 aa24.03■■□□□ 1.44
PCMTD1-207ENST00000522514 RAPGEF2Q9Y4G8 1499 aa24.02■■□□□ 1.44
PCMTD1-207ENST00000522514 PRG4Q92954 1404 aaPredicted RBP24■■□□□ 1.43
PCMTD1-207ENST00000522514 PRXQ9BXM0 1461 aa23.98■■□□□ 1.43
PCMTD1-207ENST00000522514 IQGAP2Q13576 1575 aa23.96■■□□□ 1.43
PCMTD1-207ENST00000522514 JPH4Q96JJ6 628 aa23.95■■□□□ 1.42
PCMTD1-207ENST00000522514 CTTNBP2Q8WZ74 1663 aa23.94■■□□□ 1.42
PCMTD1-207ENST00000522514 EEA1Q15075 1411 aa23.84■■□□□ 1.41
PCMTD1-207ENST00000522514 DISP1Q96F81 1524 aa23.81■■□□□ 1.4
PCMTD1-207ENST00000522514 UGGT2Q9NYU1 1516 aa23.81■■□□□ 1.4
PCMTD1-207ENST00000522514 FAM9AQ8IZU1 332 aaPredicted RBP23.81■■□□□ 1.4
PCMTD1-207ENST00000522514 CSRNP3Q8WYN3 585 aa23.81■■□□□ 1.4
PCMTD1-207ENST00000522514 KIAA0556O60303 1618 aa23.77■■□□□ 1.4
PCMTD1-207ENST00000522514 ADCY10Q96PN6 1610 aa23.77■■□□□ 1.4
PCMTD1-207ENST00000522514 PLPPR3Q6T4P5 718 aa23.76■■□□□ 1.39
PCMTD1-207ENST00000522514 KIF21BO75037 1637 aa23.75■■□□□ 1.39
PCMTD1-207ENST00000522514 CARMIL2Q6F5E8 1435 aa23.7■■□□□ 1.38
PCMTD1-207ENST00000522514 TNIKQ9UKE5 1360 aa23.67■■□□□ 1.38
PCMTD1-207ENST00000522514 PTPRGP23470 1445 aa23.65■■□□□ 1.38
PCMTD1-207ENST00000522514 TTBK1Q5TCY1 1321 aaPredicted RBP23.64■■□□□ 1.38
PCMTD1-207ENST00000522514 SAMD9Q5K651 1589 aa23.61■■□□□ 1.37
PCMTD1-207ENST00000522514 GOLGA3Q08378 1498 aa23.57■■□□□ 1.36
PCMTD1-207ENST00000522514 EHMT2Q96KQ7 1210 aa23.56■■□□□ 1.36
PCMTD1-207ENST00000522514 KIF13AQ9H1H9 1805 aa23.56■■□□□ 1.36
PCMTD1-207ENST00000522514 TRHP20396 242 aaPredicted RBP23.55■■□□□ 1.36
PCMTD1-207ENST00000522514 ABCC2Q92887 1545 aa23.54■■□□□ 1.36
PCMTD1-207ENST00000522514 MAPKBP1O60336 1514 aa23.54■■□□□ 1.36
PCMTD1-207ENST00000522514 UACAQ9BZF9 1416 aa23.52■■□□□ 1.36
PCMTD1-207ENST00000522514 UHRF1BP1LA0JNW5 1464 aa23.52■■□□□ 1.36
PCMTD1-207ENST00000522514 PLB1Q6P1J6 1458 aa23.51■■□□□ 1.35
PCMTD1-207ENST00000522514 ABCA8O94911 1581 aa23.5■■□□□ 1.35
PCMTD1-207ENST00000522514 ZCCHC11Q5TAX3 1644 aaKnown RBP23.48■■□□□ 1.35
PCMTD1-207ENST00000522514 P3H3Q8IVL6 736 aa23.46■■□□□ 1.35
PCMTD1-207ENST00000522514 DIP2BQ9P265 1576 aa23.46■■□□□ 1.35
PCMTD1-207ENST00000522514 RANGAP1P46060 587 aaPredicted RBP23.45■■□□□ 1.34
PCMTD1-207ENST00000522514 KDM5BQ9UGL1 1544 aa23.43■■□□□ 1.34
PCMTD1-207ENST00000522514 FHOD3Q2V2M9 1422 aa23.42■■□□□ 1.34
PCMTD1-207ENST00000522514 FOXD1Q16676 465 aa23.41■■□□□ 1.34
PCMTD1-207ENST00000522514 EFCAB5A4FU69 1503 aa23.41■■□□□ 1.34
PCMTD1-207ENST00000522514 ABCC10Q5T3U5 1492 aa23.4■■□□□ 1.34
PCMTD1-207ENST00000522514 NPM1P06748 294 aaKnown RBP eCLIP23.38■■□□□ 1.33
PCMTD1-207ENST00000522514 ASXL2Q76L83 1435 aa23.37■■□□□ 1.33
PCMTD1-207ENST00000522514 UBTFP17480 764 aaKnown RBP23.37■■□□□ 1.33
PCMTD1-207ENST00000522514 RAPGEF6Q8TEU7 1601 aa23.36■■□□□ 1.33
PCMTD1-207ENST00000522514 ARHGAP35Q9NRY4 1499 aa23.33■■□□□ 1.33
PCMTD1-207ENST00000522514 TSPOAP1O95153 1857 aa23.3■■□□□ 1.32
PCMTD1-207ENST00000522514 FAM69CQ0P6D2 419 aa23.28■■□□□ 1.32
PCMTD1-207ENST00000522514 NUP153P49790 1475 aaKnown RBP23.27■■□□□ 1.32
PCMTD1-207ENST00000522514 ARID3CA6NKF2 412 aa23.26■■□□□ 1.31
PCMTD1-207ENST00000522514 PPRC1Q5VV67 1664 aaKnown RBP23.25■■□□□ 1.31
PCMTD1-207ENST00000522514 ATP10BO94823 1461 aa23.25■■□□□ 1.31
PCMTD1-207ENST00000522514 EPRSP07814 1512 aaKnown RBP23.25■■□□□ 1.31
PCMTD1-207ENST00000522514 GLI2P10070 1586 aa23.25■■□□□ 1.31
PCMTD1-207ENST00000522514 WDR7Q9Y4E6 1490 aa23.24■■□□□ 1.31
PCMTD1-207ENST00000522514 MAP3K4Q9Y6R4 1608 aa23.21■■□□□ 1.31
PCMTD1-207ENST00000522514 LRRIQ1Q96JM4 1722 aa23.17■■□□□ 1.3
PCMTD1-207ENST00000522514 CDK13Q14004 1512 aaKnown RBP23.15■■□□□ 1.3
PCMTD1-207ENST00000522514 PCF11O94913 1555 aaKnown RBP23.14■■□□□ 1.29
PCMTD1-207ENST00000522514 HECW1Q76N89 1606 aa23.12■■□□□ 1.29
PCMTD1-207ENST00000522514 CLIP1P30622 1438 aa23.11■■□□□ 1.29
PCMTD1-207ENST00000522514 FMN1Q68DA7 1419 aa23.11■■□□□ 1.29
PCMTD1-207ENST00000522514 CFAP43Q8NDM7 1665 aa23.1■■□□□ 1.29
PCMTD1-207ENST00000522514 KDM6BO15054 1643 aa23.05■■□□□ 1.28
PCMTD1-207ENST00000522514 ABCA9Q8IUA7 1624 aa23.05■■□□□ 1.28
PCMTD1-207ENST00000522514 KCNH8Q96L42 1107 aa23.05■■□□□ 1.28
PCMTD1-207ENST00000522514 LOC105371045A0A1W2PR82 267 aa23.04■■□□□ 1.28
PCMTD1-207ENST00000522514 CEP162Q5TB80 1403 aa23.03■■□□□ 1.28
PCMTD1-207ENST00000522514 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23■■□□□ 1.27
PCMTD1-207ENST00000522514 HNRNPUL2Q1KMD3 747 aaKnown RBP23■■□□□ 1.27
PCMTD1-207ENST00000522514 CD109Q6YHK3 1445 aa22.99■■□□□ 1.27
PCMTD1-207ENST00000522514 CASKIN1Q8WXD9 1431 aa22.99■■□□□ 1.27
PCMTD1-207ENST00000522514 TTC37Q6PGP7 1564 aa22.98■■□□□ 1.27
PCMTD1-207ENST00000522514 MAGI3Q5TCQ9 1506 aa22.98■■□□□ 1.27
PCMTD1-207ENST00000522514 COL17A1Q9UMD9 1497 aaPredicted RBP22.97■■□□□ 1.27
PCMTD1-207ENST00000522514 TEX14Q8IWB6 1497 aa22.96■■□□□ 1.27
PCMTD1-207ENST00000522514 FYCO1Q9BQS8 1478 aa22.95■■□□□ 1.26
PCMTD1-207ENST00000522514 ATP1B4Q9UN42 357 aaPredicted RBP22.95■■□□□ 1.26
PCMTD1-207ENST00000522514 KIF14Q15058 1648 aa22.94■■□□□ 1.26
PCMTD1-207ENST00000522514 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.94■■□□□ 1.26
PCMTD1-207ENST00000522514 PLEKHD1A6NEE1 506 aa22.88■■□□□ 1.25
PCMTD1-207ENST00000522514 CCDC18Q5T9S5 1454 aa22.87■■□□□ 1.25
PCMTD1-207ENST00000522514 TROQ12816 1431 aaPredicted RBP22.85■■□□□ 1.25
PCMTD1-207ENST00000522514 MYO5CQ9NQX4 1742 aa22.82■■□□□ 1.24
PCMTD1-207ENST00000522514 FRMPD1Q5SYB0 1578 aa22.79■■□□□ 1.24
PCMTD1-207ENST00000522514 ARAP3Q8WWN8 1544 aa22.77■■□□□ 1.24
PCMTD1-207ENST00000522514 NEO1Q92859 1461 aa22.77■■□□□ 1.24
PCMTD1-207ENST00000522514 CFAP74Q9C0B2 1584 aa22.76■■□□□ 1.23
PCMTD1-207ENST00000522514 FANCAO15360 1455 aa22.75■■□□□ 1.23
PCMTD1-207ENST00000522514 CDC42BPBQ9Y5S2 1711 aa22.74■■□□□ 1.23
PCMTD1-207ENST00000522514 VPS8Q8N3P4 1428 aa22.74■■□□□ 1.23
PCMTD1-207ENST00000522514 CDC42BPAQ5VT25 1732 aa22.73■■□□□ 1.23
PCMTD1-207ENST00000522514 RICTORQ6R327 1708 aa22.73■■□□□ 1.23
PCMTD1-207ENST00000522514 PREX2Q70Z35 1606 aa22.72■■□□□ 1.23
PCMTD1-207ENST00000522514 CDK11AQ9UQ88 783 aaPredicted RBP22.72■■□□□ 1.23
PCMTD1-207ENST00000522514 PLCH2O75038 1416 aa22.72■■□□□ 1.23
PCMTD1-207ENST00000522514 AKNAQ7Z591 1439 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms