RNA–Protein interactions for RNA: ENST00000522262.1

CDH12-208, Transcript of cadherin 12, humanhuman

TSL 2 BASIC

Gene CDH12, Length 3,028 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12-208ENST00000522262 ARHGEF11O15085 1522 aa11.24□□□□□ -0.61
CDH12-208ENST00000522262 RIMBP3CA6NJZ7 1639 aa11.24□□□□□ -0.61
CDH12-208ENST00000522262 RIMBP3BA6NNM3 1639 aa11.24□□□□□ -0.61
CDH12-208ENST00000522262 RIMBP3Q9UFD9 1639 aa11.24□□□□□ -0.61
CDH12-208ENST00000522262 KIF21BO75037 1637 aa11.23□□□□□ -0.61
CDH12-208ENST00000522262 KIAA0586Q9BVV6 1533 aa11.21□□□□□ -0.61
CDH12-208ENST00000522262 CTTNBP2Q8WZ74 1663 aa11.2□□□□□ -0.62
CDH12-208ENST00000522262 IQGAP2Q13576 1575 aa11.19□□□□□ -0.62
CDH12-208ENST00000522262 ARAP1Q96P48 1450 aa11.18□□□□□ -0.62
CDH12-208ENST00000522262 EHMT2Q96KQ7 1210 aa11.17□□□□□ -0.62
CDH12-208ENST00000522262 JPH4Q96JJ6 628 aa11.16□□□□□ -0.62
CDH12-208ENST00000522262 PRG4Q92954 1404 aaPredicted RBP11.16□□□□□ -0.62
CDH12-208ENST00000522262 DISP1Q96F81 1524 aa11.15□□□□□ -0.62
CDH12-208ENST00000522262 UGGT2Q9NYU1 1516 aa11.14□□□□□ -0.63
CDH12-208ENST00000522262 GOLGA3Q08378 1498 aa11.14□□□□□ -0.63
CDH12-208ENST00000522262 KIAA0556O60303 1618 aa11.11□□□□□ -0.63
CDH12-208ENST00000522262 SAMD9Q5K651 1589 aa11.09□□□□□ -0.63
CDH12-208ENST00000522262 CYB5RLQ6IPT4 315 aa11.07□□□□□ -0.64
CDH12-208ENST00000522262 LOC105371045A0A1W2PR82 267 aa11.07□□□□□ -0.64
CDH12-208ENST00000522262 UBTFP17480 764 aaKnown RBP11.04□□□□□ -0.64
CDH12-208ENST00000522262 RANGAP1P46060 587 aaPredicted RBP11.04□□□□□ -0.64
CDH12-208ENST00000522262 ADCY10Q96PN6 1610 aa11.03□□□□□ -0.64
CDH12-208ENST00000522262 ARHGAP35Q9NRY4 1499 aa11.03□□□□□ -0.64
CDH12-208ENST00000522262 TNIKQ9UKE5 1360 aa11.03□□□□□ -0.64
CDH12-208ENST00000522262 CARMIL2Q6F5E8 1435 aa11.02□□□□□ -0.64
CDH12-208ENST00000522262 P3H3Q8IVL6 736 aa11.02□□□□□ -0.65
CDH12-208ENST00000522262 FHOD3Q2V2M9 1422 aa11.02□□□□□ -0.65
CDH12-208ENST00000522262 TTBK1Q5TCY1 1321 aaPredicted RBP11.01□□□□□ -0.65
CDH12-208ENST00000522262 PTPRGP23470 1445 aa11□□□□□ -0.65
CDH12-208ENST00000522262 PLB1Q6P1J6 1458 aa11□□□□□ -0.65
CDH12-208ENST00000522262 EFCAB5A4FU69 1503 aa10.99□□□□□ -0.65
CDH12-208ENST00000522262 ABCA8O94911 1581 aa10.98□□□□□ -0.65
CDH12-208ENST00000522262 ABCC2Q92887 1545 aa10.96□□□□□ -0.66
CDH12-208ENST00000522262 CEP162Q5TB80 1403 aa10.96□□□□□ -0.66
CDH12-208ENST00000522262 UACAQ9BZF9 1416 aa10.96□□□□□ -0.66
CDH12-208ENST00000522262 UHRF1BP1LA0JNW5 1464 aa10.94□□□□□ -0.66
CDH12-208ENST00000522262 CLIP1P30622 1438 aa10.94□□□□□ -0.66
CDH12-208ENST00000522262 RAPGEF6Q8TEU7 1601 aa10.93□□□□□ -0.66
CDH12-208ENST00000522262 LRRIQ1Q96JM4 1722 aa10.93□□□□□ -0.66
CDH12-208ENST00000522262 ZCCHC11Q5TAX3 1644 aaKnown RBP10.92□□□□□ -0.66
CDH12-208ENST00000522262 NUP153P49790 1475 aaKnown RBP10.92□□□□□ -0.66
CDH12-208ENST00000522262 KDM5BQ9UGL1 1544 aa10.92□□□□□ -0.66
CDH12-208ENST00000522262 PCF11O94913 1555 aaKnown RBP10.9□□□□□ -0.66
CDH12-208ENST00000522262 MAPKBP1O60336 1514 aa10.89□□□□□ -0.67
CDH12-208ENST00000522262 ARID3CA6NKF2 412 aa10.88□□□□□ -0.67
CDH12-208ENST00000522262 ATP10BO94823 1461 aa10.88□□□□□ -0.67
CDH12-208ENST00000522262 CDK13Q14004 1512 aaKnown RBP10.87□□□□□ -0.67
CDH12-208ENST00000522262 KIF13AQ9H1H9 1805 aa10.86□□□□□ -0.67
CDH12-208ENST00000522262 FMN1Q68DA7 1419 aa10.86□□□□□ -0.67
CDH12-208ENST00000522262 ASXL2Q76L83 1435 aa10.85□□□□□ -0.67
CDH12-208ENST00000522262 DIP2BQ9P265 1576 aa10.84□□□□□ -0.67
CDH12-208ENST00000522262 CASKIN1Q8WXD9 1431 aa10.83□□□□□ -0.67
CDH12-208ENST00000522262 HECW1Q76N89 1606 aa10.83□□□□□ -0.68
CDH12-208ENST00000522262 EPRSP07814 1512 aaKnown RBP10.83□□□□□ -0.68
CDH12-208ENST00000522262 MAGI3Q5TCQ9 1506 aa10.82□□□□□ -0.68
CDH12-208ENST00000522262 ABCC10Q5T3U5 1492 aa10.82□□□□□ -0.68
CDH12-208ENST00000522262 FYCO1Q9BQS8 1478 aa10.81□□□□□ -0.68
CDH12-208ENST00000522262 WDR7Q9Y4E6 1490 aa10.81□□□□□ -0.68
CDH12-208ENST00000522262 VPS8Q8N3P4 1428 aa10.8□□□□□ -0.68
CDH12-208ENST00000522262 NPM1P06748 294 aaKnown RBP eCLIP10.78□□□□□ -0.68
CDH12-208ENST00000522262 PPRC1Q5VV67 1664 aaKnown RBP10.78□□□□□ -0.68
CDH12-208ENST00000522262 GLI2P10070 1586 aa10.77□□□□□ -0.69
CDH12-208ENST00000522262 ATP1B4Q9UN42 357 aaPredicted RBP10.76□□□□□ -0.69
CDH12-208ENST00000522262 KIF14Q15058 1648 aa10.76□□□□□ -0.69
CDH12-208ENST00000522262 MAP3K4Q9Y6R4 1608 aa10.76□□□□□ -0.69
CDH12-208ENST00000522262 TRHP20396 242 aaPredicted RBP10.75□□□□□ -0.69
CDH12-208ENST00000522262 FAM69CQ0P6D2 419 aa10.75□□□□□ -0.69
CDH12-208ENST00000522262 CFAP43Q8NDM7 1665 aa10.75□□□□□ -0.69
CDH12-208ENST00000522262 TTC37Q6PGP7 1564 aa10.74□□□□□ -0.69
CDH12-208ENST00000522262 CCDC18Q5T9S5 1454 aa10.74□□□□□ -0.69
CDH12-208ENST00000522262 TSPOAP1O95153 1857 aa10.74□□□□□ -0.69
CDH12-208ENST00000522262 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.73□□□□□ -0.69
CDH12-208ENST00000522262 ABCA9Q8IUA7 1624 aa10.73□□□□□ -0.69
CDH12-208ENST00000522262 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.73□□□□□ -0.69
CDH12-208ENST00000522262 HNRNPUL2Q1KMD3 747 aaKnown RBP10.73□□□□□ -0.69
CDH12-208ENST00000522262 TIAM1Q13009 1591 aa10.73□□□□□ -0.69
CDH12-208ENST00000522262 KCNH8Q96L42 1107 aa10.73□□□□□ -0.69
CDH12-208ENST00000522262 TROQ12816 1431 aaPredicted RBP10.71□□□□□ -0.69
CDH12-208ENST00000522262 KANK4Q5T7N3 995 aaPredicted RBP10.69□□□□□ -0.7
CDH12-208ENST00000522262 PLEKHD1A6NEE1 506 aa10.69□□□□□ -0.7
CDH12-208ENST00000522262 CD109Q6YHK3 1445 aa10.67□□□□□ -0.7
CDH12-208ENST00000522262 MAP3K1Q13233 1512 aa10.67□□□□□ -0.7
CDH12-208ENST00000522262 LRRC9Q6ZRR7 1453 aa10.67□□□□□ -0.7
CDH12-208ENST00000522262 EHBP1L1Q8N3D4 1523 aa10.66□□□□□ -0.7
CDH12-208ENST00000522262 COL17A1Q9UMD9 1497 aaPredicted RBP10.66□□□□□ -0.7
CDH12-208ENST00000522262 CDC42BPAQ5VT25 1732 aa10.65□□□□□ -0.7
CDH12-208ENST00000522262 CDC42BPBQ9Y5S2 1711 aa10.65□□□□□ -0.7
CDH12-208ENST00000522262 MYO5CQ9NQX4 1742 aa10.64□□□□□ -0.71
CDH12-208ENST00000522262 PREX2Q70Z35 1606 aa10.63□□□□□ -0.71
CDH12-208ENST00000522262 MTUS2Q5JR59 1369 aa10.63□□□□□ -0.71
CDH12-208ENST00000522262 CDK11AQ9UQ88 783 aaPredicted RBP10.63□□□□□ -0.71
CDH12-208ENST00000522262 GPATCH8Q9UKJ3 1502 aaKnown RBP10.62□□□□□ -0.71
CDH12-208ENST00000522262 NCOA2Q15596 1464 aa10.62□□□□□ -0.71
CDH12-208ENST00000522262 PLCH2O75038 1416 aa10.62□□□□□ -0.71
CDH12-208ENST00000522262 SUPT6HQ7KZ85 1726 aaKnown RBP10.61□□□□□ -0.71
CDH12-208ENST00000522262 FRMPD1Q5SYB0 1578 aa10.6□□□□□ -0.71
CDH12-208ENST00000522262 FANCAO15360 1455 aa10.6□□□□□ -0.71
CDH12-208ENST00000522262 ARAP3Q8WWN8 1544 aa10.6□□□□□ -0.71
CDH12-208ENST00000522262 ARHGEF12Q9NZN5 1544 aa10.59□□□□□ -0.71
CDH12-208ENST00000522262 TEX14Q8IWB6 1497 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms