RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 PRG4Q92954 1404 aaPredicted RBP35.8■■■■□ 3.32
SDCBP-209ENST00000522243 CUL7Q14999 1698 aa35.79■■■■□ 3.32
SDCBP-209ENST00000522243 CARMIL1Q5VZK9 1371 aa35.66■■■■□ 3.3
SDCBP-209ENST00000522243 KIAA0586Q9BVV6 1533 aa35.63■■■■□ 3.29
SDCBP-209ENST00000522243 IQGAP2Q13576 1575 aa35.37■■■■□ 3.25
SDCBP-209ENST00000522243 RAPGEF2Q9Y4G8 1499 aa35.36■■■■□ 3.25
SDCBP-209ENST00000522243 ADCY10Q96PN6 1610 aa35.35■■■■□ 3.25
SDCBP-209ENST00000522243 TTBK1Q5TCY1 1321 aaPredicted RBP35.33■■■■□ 3.25
SDCBP-209ENST00000522243 NPM1P06748 294 aaKnown RBP eCLIP35.32■■■■□ 3.24
SDCBP-209ENST00000522243 KIF13AQ9H1H9 1805 aa35.29■■■■□ 3.24
SDCBP-209ENST00000522243 CARMIL2Q6F5E8 1435 aa35.28■■■■□ 3.24
SDCBP-209ENST00000522243 PTPRGP23470 1445 aa35.27■■■■□ 3.24
SDCBP-209ENST00000522243 TNIKQ9UKE5 1360 aa35.22■■■■□ 3.23
SDCBP-209ENST00000522243 MAPKBP1O60336 1514 aa35.18■■■■□ 3.22
SDCBP-209ENST00000522243 DISP1Q96F81 1524 aa35.16■■■■□ 3.22
SDCBP-209ENST00000522243 FAM69CQ0P6D2 419 aa35.15■■■■□ 3.22
SDCBP-209ENST00000522243 ABCC10Q5T3U5 1492 aa35.14■■■■□ 3.22
SDCBP-209ENST00000522243 UGGT2Q9NYU1 1516 aa35.13■■■■□ 3.21
SDCBP-209ENST00000522243 CTTNBP2Q8WZ74 1663 aa35.11■■■■□ 3.21
SDCBP-209ENST00000522243 DIP2BQ9P265 1576 aa35.08■■■■□ 3.21
SDCBP-209ENST00000522243 PRXQ9BXM0 1461 aa35.06■■■■□ 3.2
SDCBP-209ENST00000522243 KIAA0556O60303 1618 aa35.05■■■■□ 3.2
SDCBP-209ENST00000522243 ABCC2Q92887 1545 aa35.01■■■■□ 3.2
SDCBP-209ENST00000522243 UACAQ9BZF9 1416 aa35.01■■■■□ 3.2
SDCBP-209ENST00000522243 UHRF1BP1LA0JNW5 1464 aa34.97■■■■□ 3.19
SDCBP-209ENST00000522243 CSRNP3Q8WYN3 585 aa34.92■■■■□ 3.18
SDCBP-209ENST00000522243 TSPOAP1O95153 1857 aa34.92■■■■□ 3.18
SDCBP-209ENST00000522243 ASXL2Q76L83 1435 aa34.89■■■■□ 3.18
SDCBP-209ENST00000522243 GOLGA3Q08378 1498 aa34.86■■■■□ 3.17
SDCBP-209ENST00000522243 PLB1Q6P1J6 1458 aa34.84■■■■□ 3.17
SDCBP-209ENST00000522243 KDM5BQ9UGL1 1544 aa34.83■■■■□ 3.17
SDCBP-209ENST00000522243 ZCCHC11Q5TAX3 1644 aaKnown RBP34.81■■■■□ 3.16
SDCBP-209ENST00000522243 FAM9AQ8IZU1 332 aaPredicted RBP34.78■■■■□ 3.16
SDCBP-209ENST00000522243 EEA1Q15075 1411 aa34.76■■■■□ 3.16
SDCBP-209ENST00000522243 P3H3Q8IVL6 736 aa34.73■■■■□ 3.15
SDCBP-209ENST00000522243 GLI2P10070 1586 aa34.73■■■■□ 3.15
SDCBP-209ENST00000522243 KDM6BO15054 1643 aa34.72■■■■□ 3.15
SDCBP-209ENST00000522243 ABCA8O94911 1581 aa34.7■■■■□ 3.15
SDCBP-209ENST00000522243 AEBP2Q6ZN18 517 aaPredicted RBP34.7■■■■□ 3.15
SDCBP-209ENST00000522243 EPRSP07814 1512 aaKnown RBP34.68■■■■□ 3.14
SDCBP-209ENST00000522243 PPRC1Q5VV67 1664 aaKnown RBP34.66■■■■□ 3.14
SDCBP-209ENST00000522243 RANGAP1P46060 587 aaPredicted RBP34.59■■■■□ 3.13
SDCBP-209ENST00000522243 WDR7Q9Y4E6 1490 aa34.58■■■■□ 3.13
SDCBP-209ENST00000522243 CHIC1Q5VXU3 224 aa34.58■■■■□ 3.13
SDCBP-209ENST00000522243 MAP3K4Q9Y6R4 1608 aa34.58■■■■□ 3.13
SDCBP-209ENST00000522243 SAMD9Q5K651 1589 aa34.57■■■■□ 3.13
SDCBP-209ENST00000522243 ARID3CA6NKF2 412 aa34.54■■■■□ 3.12
SDCBP-209ENST00000522243 KCNH8Q96L42 1107 aa34.5■■■■□ 3.11
SDCBP-209ENST00000522243 KIF21BO75037 1637 aa34.5■■■■□ 3.11
SDCBP-209ENST00000522243 EHMT2Q96KQ7 1210 aa34.45■■■■□ 3.11
SDCBP-209ENST00000522243 ATP10BO94823 1461 aa34.43■■■■□ 3.1
SDCBP-209ENST00000522243 TEX14Q8IWB6 1497 aa34.43■■■■□ 3.1
SDCBP-209ENST00000522243 RAPGEF6Q8TEU7 1601 aa34.41■■■■□ 3.1
SDCBP-209ENST00000522243 FHOD3Q2V2M9 1422 aa34.4■■■■□ 3.1
SDCBP-209ENST00000522243 COL17A1Q9UMD9 1497 aaPredicted RBP34.39■■■■□ 3.1
SDCBP-209ENST00000522243 CFAP43Q8NDM7 1665 aa34.38■■■■□ 3.09
SDCBP-209ENST00000522243 CD109Q6YHK3 1445 aa34.37■■■■□ 3.09
SDCBP-209ENST00000522243 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.31■■■■□ 3.08
SDCBP-209ENST00000522243 HNRNPUL2Q1KMD3 747 aaKnown RBP34.31■■■■□ 3.08
SDCBP-209ENST00000522243 UBTFP17480 764 aaKnown RBP34.3■■■■□ 3.08
SDCBP-209ENST00000522243 MAGI3Q5TCQ9 1506 aa34.29■■■■□ 3.08
SDCBP-209ENST00000522243 EFCAB5A4FU69 1503 aa34.27■■■■□ 3.08
SDCBP-209ENST00000522243 NUP153P49790 1475 aaKnown RBP34.27■■■■□ 3.08
SDCBP-209ENST00000522243 KDM4FA0A1W2PPD8 638 aa34.24■■■■□ 3.07
SDCBP-209ENST00000522243 ABCA9Q8IUA7 1624 aa34.16■■■■□ 3.06
SDCBP-209ENST00000522243 PLEKHD1A6NEE1 506 aa34.07■■■■□ 3.04
SDCBP-209ENST00000522243 ARHGAP35Q9NRY4 1499 aa34.07■■■■□ 3.04
SDCBP-209ENST00000522243 ADGRL1O94910 1474 aa34.03■■■■□ 3.04
SDCBP-209ENST00000522243 CDK13Q14004 1512 aaKnown RBP34.01■■■■□ 3.04
SDCBP-209ENST00000522243 ARAP3Q8WWN8 1544 aa34.01■■■■□ 3.04
SDCBP-209ENST00000522243 ATP1B4Q9UN42 357 aaPredicted RBP34.01■■■■□ 3.03
SDCBP-209ENST00000522243 FMN1Q68DA7 1419 aa33.96■■■■□ 3.03
SDCBP-209ENST00000522243 PHLDB1Q86UU1 1377 aa33.94■■■■□ 3.02
SDCBP-209ENST00000522243 NEO1Q92859 1461 aa33.93■■■■□ 3.02
SDCBP-209ENST00000522243 HECW1Q76N89 1606 aa33.92■■■■□ 3.02
SDCBP-209ENST00000522243 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.91■■■■□ 3.02
SDCBP-209ENST00000522243 RAPGEF3O95398 923 aa33.89■■■■□ 3.02
SDCBP-209ENST00000522243 TTC37Q6PGP7 1564 aa33.87■■■■□ 3.01
SDCBP-209ENST00000522243 FRMPD1Q5SYB0 1578 aa33.8■■■■□ 3
SDCBP-209ENST00000522243 FANCAO15360 1455 aa33.79■■■■□ 3
SDCBP-209ENST00000522243 LRRIQ1Q96JM4 1722 aa33.79■■■■□ 3
SDCBP-209ENST00000522243 AKNAQ7Z591 1439 aa33.77■■■■□ 3
SDCBP-209ENST00000522243 CFAP74Q9C0B2 1584 aa33.76■■■□□ 2.99
SDCBP-209ENST00000522243 CDK11AQ9UQ88 783 aaPredicted RBP33.74■■■□□ 2.99
SDCBP-209ENST00000522243 DENND4BO75064 1496 aaPredicted RBP33.72■■■□□ 2.99
SDCBP-209ENST00000522243 PCF11O94913 1555 aaKnown RBP33.7■■■□□ 2.99
SDCBP-209ENST00000522243 RICTORQ6R327 1708 aa33.7■■■□□ 2.98
SDCBP-209ENST00000522243 KIF14Q15058 1648 aa33.69■■■□□ 2.98
SDCBP-209ENST00000522243 PLCH2O75038 1416 aa33.68■■■□□ 2.98
SDCBP-209ENST00000522243 TROQ12816 1431 aaPredicted RBP33.66■■■□□ 2.98
SDCBP-209ENST00000522243 MYO5CQ9NQX4 1742 aa33.65■■■□□ 2.98
SDCBP-209ENST00000522243 CASKIN1Q8WXD9 1431 aa33.65■■■□□ 2.98
SDCBP-209ENST00000522243 CLIP1P30622 1438 aa33.64■■■□□ 2.98
SDCBP-209ENST00000522243 ARID4BQ4LE39 1312 aaPredicted RBP33.57■■■□□ 2.97
SDCBP-209ENST00000522243 SCAPERQ9BY12 1400 aa33.57■■■□□ 2.96
SDCBP-209ENST00000522243 ARHGEF40Q8TER5 1519 aa33.57■■■□□ 2.96
SDCBP-209ENST00000522243 CCDC18Q5T9S5 1454 aa33.56■■■□□ 2.96
SDCBP-209ENST00000522243 EFCAB2Q5VUJ9 269 aa33.56■■■□□ 2.96
SDCBP-209ENST00000522243 ZMYM4Q5VZL5 1548 aa33.53■■■□□ 2.96
SDCBP-209ENST00000522243 ADAMTSL3P82987 1691 aa33.53■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms