RNA–Protein interactions for RNA: ENST00000522222.5

SPIDR-218, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-218ENST00000522222 ARAP1Q96P48 1450 aa11.57□□□□□ -0.56
SPIDR-218ENST00000522222 IGF1RP08069 1367 aa11.56□□□□□ -0.56
SPIDR-218ENST00000522222 PLPPR3Q6T4P5 718 aa11.56□□□□□ -0.56
SPIDR-218ENST00000522222 RUSC2Q8N2Y8 1516 aa11.55□□□□□ -0.56
SPIDR-218ENST00000522222 TRIM41Q8WV44 630 aa11.55□□□□□ -0.56
SPIDR-218ENST00000522222 SHROOM2Q13796 1616 aa11.53□□□□□ -0.56
SPIDR-218ENST00000522222 ERCC6L2Q5T890 1561 aa11.51□□□□□ -0.57
SPIDR-218ENST00000522222 CARMIL1Q5VZK9 1371 aa11.51□□□□□ -0.57
SPIDR-218ENST00000522222 KIAA0586Q9BVV6 1533 aa11.46□□□□□ -0.57
SPIDR-218ENST00000522222 CYB5RLQ6IPT4 315 aa11.46□□□□□ -0.57
SPIDR-218ENST00000522222 RAPGEF2Q9Y4G8 1499 aa11.44□□□□□ -0.58
SPIDR-218ENST00000522222 PRG4Q92954 1404 aaPredicted RBP11.43□□□□□ -0.58
SPIDR-218ENST00000522222 IQGAP2Q13576 1575 aa11.42□□□□□ -0.58
SPIDR-218ENST00000522222 PRXQ9BXM0 1461 aa11.42□□□□□ -0.58
SPIDR-218ENST00000522222 JPH4Q96JJ6 628 aa11.41□□□□□ -0.58
SPIDR-218ENST00000522222 EEA1Q15075 1411 aa11.39□□□□□ -0.59
SPIDR-218ENST00000522222 CTTNBP2Q8WZ74 1663 aa11.38□□□□□ -0.59
SPIDR-218ENST00000522222 UGGT2Q9NYU1 1516 aa11.35□□□□□ -0.59
SPIDR-218ENST00000522222 DISP1Q96F81 1524 aa11.34□□□□□ -0.59
SPIDR-218ENST00000522222 CSRNP3Q8WYN3 585 aa11.33□□□□□ -0.6
SPIDR-218ENST00000522222 KIAA0556O60303 1618 aa11.33□□□□□ -0.6
SPIDR-218ENST00000522222 CARMIL2Q6F5E8 1435 aa11.32□□□□□ -0.6
SPIDR-218ENST00000522222 KIF21BO75037 1637 aa11.31□□□□□ -0.6
SPIDR-218ENST00000522222 ADCY10Q96PN6 1610 aa11.31□□□□□ -0.6
SPIDR-218ENST00000522222 FAM9AQ8IZU1 332 aaPredicted RBP11.3□□□□□ -0.6
SPIDR-218ENST00000522222 TNIKQ9UKE5 1360 aa11.29□□□□□ -0.6
SPIDR-218ENST00000522222 PTPRGP23470 1445 aa11.28□□□□□ -0.6
SPIDR-218ENST00000522222 GOLGA3Q08378 1498 aa11.26□□□□□ -0.61
SPIDR-218ENST00000522222 TTBK1Q5TCY1 1321 aaPredicted RBP11.25□□□□□ -0.61
SPIDR-218ENST00000522222 TRHP20396 242 aaPredicted RBP11.24□□□□□ -0.61
SPIDR-218ENST00000522222 MAPKBP1O60336 1514 aa11.24□□□□□ -0.61
SPIDR-218ENST00000522222 ABCC2Q92887 1545 aa11.24□□□□□ -0.61
SPIDR-218ENST00000522222 SAMD9Q5K651 1589 aa11.24□□□□□ -0.61
SPIDR-218ENST00000522222 UHRF1BP1LA0JNW5 1464 aa11.23□□□□□ -0.61
SPIDR-218ENST00000522222 UACAQ9BZF9 1416 aa11.22□□□□□ -0.61
SPIDR-218ENST00000522222 ABCA8O94911 1581 aa11.2□□□□□ -0.62
SPIDR-218ENST00000522222 PLB1Q6P1J6 1458 aa11.19□□□□□ -0.62
SPIDR-218ENST00000522222 KIF13AQ9H1H9 1805 aa11.19□□□□□ -0.62
SPIDR-218ENST00000522222 DIP2BQ9P265 1576 aa11.19□□□□□ -0.62
SPIDR-218ENST00000522222 EFCAB5A4FU69 1503 aa11.18□□□□□ -0.62
SPIDR-218ENST00000522222 ZCCHC11Q5TAX3 1644 aaKnown RBP11.17□□□□□ -0.62
SPIDR-218ENST00000522222 EHMT2Q96KQ7 1210 aa11.17□□□□□ -0.62
SPIDR-218ENST00000522222 KDM5BQ9UGL1 1544 aa11.17□□□□□ -0.62
SPIDR-218ENST00000522222 ABCC10Q5T3U5 1492 aa11.17□□□□□ -0.62
SPIDR-218ENST00000522222 NPM1P06748 294 aaKnown RBP eCLIP11.16□□□□□ -0.62
SPIDR-218ENST00000522222 FHOD3Q2V2M9 1422 aa11.16□□□□□ -0.62
SPIDR-218ENST00000522222 ASXL2Q76L83 1435 aa11.15□□□□□ -0.62
SPIDR-218ENST00000522222 RANGAP1P46060 587 aaPredicted RBP11.14□□□□□ -0.63
SPIDR-218ENST00000522222 CACNB1Q02641 598 aaPredicted RBP11.14□□□□□ -0.63
SPIDR-218ENST00000522222 P3H3Q8IVL6 736 aa11.14□□□□□ -0.63
SPIDR-218ENST00000522222 RAPGEF6Q8TEU7 1601 aa11.13□□□□□ -0.63
SPIDR-218ENST00000522222 UBTFP17480 764 aaKnown RBP11.12□□□□□ -0.63
SPIDR-218ENST00000522222 FAM69CQ0P6D2 419 aa11.1□□□□□ -0.63
SPIDR-218ENST00000522222 ARHGAP35Q9NRY4 1499 aa11.1□□□□□ -0.63
SPIDR-218ENST00000522222 WDR7Q9Y4E6 1490 aa11.1□□□□□ -0.63
SPIDR-218ENST00000522222 GLI2P10070 1586 aa11.09□□□□□ -0.63
SPIDR-218ENST00000522222 EPRSP07814 1512 aaKnown RBP11.09□□□□□ -0.63
SPIDR-218ENST00000522222 NUP153P49790 1475 aaKnown RBP11.08□□□□□ -0.64
SPIDR-218ENST00000522222 ATP10BO94823 1461 aa11.06□□□□□ -0.64
SPIDR-218ENST00000522222 PPRC1Q5VV67 1664 aaKnown RBP11.06□□□□□ -0.64
SPIDR-218ENST00000522222 ARID3CA6NKF2 412 aa11.06□□□□□ -0.64
SPIDR-218ENST00000522222 TSPOAP1O95153 1857 aa11.06□□□□□ -0.64
SPIDR-218ENST00000522222 MAP3K4Q9Y6R4 1608 aa11.06□□□□□ -0.64
SPIDR-218ENST00000522222 FMN1Q68DA7 1419 aa11.03□□□□□ -0.64
SPIDR-218ENST00000522222 HECW1Q76N89 1606 aa11.03□□□□□ -0.64
SPIDR-218ENST00000522222 PPP6R1Q9UPN7 881 aa11.03□□□□□ -0.64
SPIDR-218ENST00000522222 CDK13Q14004 1512 aaKnown RBP11.02□□□□□ -0.65
SPIDR-218ENST00000522222 PCF11O94913 1555 aaKnown RBP11.02□□□□□ -0.65
SPIDR-218ENST00000522222 CLIP1P30622 1438 aa11.01□□□□□ -0.65
SPIDR-218ENST00000522222 CFAP43Q8NDM7 1665 aa11.01□□□□□ -0.65
SPIDR-218ENST00000522222 KDM6BO15054 1643 aa11□□□□□ -0.65
SPIDR-218ENST00000522222 ABCA9Q8IUA7 1624 aa10.98□□□□□ -0.65
SPIDR-218ENST00000522222 TEX14Q8IWB6 1497 aa10.98□□□□□ -0.65
SPIDR-218ENST00000522222 CEP162Q5TB80 1403 aa10.97□□□□□ -0.65
SPIDR-218ENST00000522222 MAGI3Q5TCQ9 1506 aa10.97□□□□□ -0.65
SPIDR-218ENST00000522222 LRRIQ1Q96JM4 1722 aa10.97□□□□□ -0.65
SPIDR-218ENST00000522222 CD109Q6YHK3 1445 aa10.96□□□□□ -0.65
SPIDR-218ENST00000522222 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.96□□□□□ -0.65
SPIDR-218ENST00000522222 ADRA2BP18089 450 aa10.96□□□□□ -0.65
SPIDR-218ENST00000522222 HNRNPUL2Q1KMD3 747 aaKnown RBP10.96□□□□□ -0.65
SPIDR-218ENST00000522222 KCNH8Q96L42 1107 aa10.96□□□□□ -0.65
SPIDR-218ENST00000522222 FYCO1Q9BQS8 1478 aa10.95□□□□□ -0.66
SPIDR-218ENST00000522222 CASKIN1Q8WXD9 1431 aa10.95□□□□□ -0.66
SPIDR-218ENST00000522222 TTC37Q6PGP7 1564 aa10.94□□□□□ -0.66
SPIDR-218ENST00000522222 CCDC18Q5T9S5 1454 aa10.93□□□□□ -0.66
SPIDR-218ENST00000522222 COL17A1Q9UMD9 1497 aaPredicted RBP10.93□□□□□ -0.66
SPIDR-218ENST00000522222 ATP1B4Q9UN42 357 aaPredicted RBP10.92□□□□□ -0.66
SPIDR-218ENST00000522222 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.92□□□□□ -0.66
SPIDR-218ENST00000522222 KIF14Q15058 1648 aa10.91□□□□□ -0.66
SPIDR-218ENST00000522222 PLEKHD1A6NEE1 506 aa10.9□□□□□ -0.66
SPIDR-218ENST00000522222 TROQ12816 1431 aaPredicted RBP10.9□□□□□ -0.66
SPIDR-218ENST00000522222 LOC105371045A0A1W2PR82 267 aa10.89□□□□□ -0.67
SPIDR-218ENST00000522222 NEO1Q92859 1461 aa10.87□□□□□ -0.67
SPIDR-218ENST00000522222 CFAP74Q9C0B2 1584 aa10.87□□□□□ -0.67
SPIDR-218ENST00000522222 ARAP3Q8WWN8 1544 aa10.86□□□□□ -0.67
SPIDR-218ENST00000522222 MYO5CQ9NQX4 1742 aa10.86□□□□□ -0.67
SPIDR-218ENST00000522222 FRMPD1Q5SYB0 1578 aa10.86□□□□□ -0.67
SPIDR-218ENST00000522222 CDK11AQ9UQ88 783 aaPredicted RBP10.85□□□□□ -0.67
SPIDR-218ENST00000522222 FANCAO15360 1455 aa10.85□□□□□ -0.67
SPIDR-218ENST00000522222 VPS8Q8N3P4 1428 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms