RNA–Protein interactions for RNA: ENST00000522046.1

LRP12-206, Transcript of LDL receptor related protein 12, humanhuman

TSL 2

Gene LRP12, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP12-206ENST00000522046 SP7Q8TDD2 431 aaPredicted RBP13.65□□□□□ -0.22
LRP12-206ENST00000522046 HMGXB3Q12766 1538 aa13.64□□□□□ -0.23
LRP12-206ENST00000522046 ATAD2BQ9ULI0 1458 aa13.63□□□□□ -0.23
LRP12-206ENST00000522046 SMARCA4P51532 1647 aa13.62□□□□□ -0.23
LRP12-206ENST00000522046 EVX2Q03828 476 aa13.61□□□□□ -0.23
LRP12-206ENST00000522046 BAZ1BQ9UIG0 1483 aaKnown RBP13.56□□□□□ -0.24
LRP12-206ENST00000522046 BAZ1AQ9NRL2 1556 aaPredicted RBP13.56□□□□□ -0.24
LRP12-206ENST00000522046 CD44P16070 742 aaKnown RBP13.52□□□□□ -0.25
LRP12-206ENST00000522046 MNX1P50219 401 aaPredicted RBP13.52□□□□□ -0.25
LRP12-206ENST00000522046 NESP48681 1621 aa13.5□□□□□ -0.25
LRP12-206ENST00000522046 NPM1P06748 294 aaKnown RBP eCLIP13.49□□□□□ -0.25
LRP12-206ENST00000522046 LAMC3Q9Y6N6 1575 aa13.49□□□□□ -0.25
LRP12-206ENST00000522046 MIER1Q8N108 512 aa13.48□□□□□ -0.25
LRP12-206ENST00000522046 PEG3Q9GZU2 1588 aa13.47□□□□□ -0.25
LRP12-206ENST00000522046 PLEKHG5O94827 1062 aa13.47□□□□□ -0.25
LRP12-206ENST00000522046 FBXO3Q9UK99 471 aa13.46□□□□□ -0.25
LRP12-206ENST00000522046 THOC2Q8NI27 1593 aaKnown RBP13.45□□□□□ -0.26
LRP12-206ENST00000522046 PLCD3Q8N3E9 789 aa13.42□□□□□ -0.26
LRP12-206ENST00000522046 KIF21AQ7Z4S6 1674 aa13.41□□□□□ -0.26
LRP12-206ENST00000522046 PDS5BQ9NTI5 1447 aa13.41□□□□□ -0.26
LRP12-206ENST00000522046 ZRANB1Q9UGI0 708 aa13.38□□□□□ -0.27
LRP12-206ENST00000522046 PAK3O75914 559 aaPredicted RBP13.37□□□□□ -0.27
LRP12-206ENST00000522046 MROH2BQ7Z745 1585 aa13.36□□□□□ -0.27
LRP12-206ENST00000522046 GABBR2O75899 941 aa13.35□□□□□ -0.27
LRP12-206ENST00000522046 ZNF579Q8NAF0 562 aaKnown RBP13.33□□□□□ -0.28
LRP12-206ENST00000522046 ZBTB47Q9UFB7 747 aaPredicted RBP13.33□□□□□ -0.28
LRP12-206ENST00000522046 CLCN6P51797 869 aa13.31□□□□□ -0.28
LRP12-206ENST00000522046 CADPSQ9ULU8 1353 aa13.29□□□□□ -0.28
LRP12-206ENST00000522046 MRC2Q9UBG0 1479 aa13.29□□□□□ -0.28
LRP12-206ENST00000522046 VASPP50552 380 aaPredicted RBP13.27□□□□□ -0.29
LRP12-206ENST00000522046 WDR62O43379 1518 aa13.24□□□□□ -0.29
LRP12-206ENST00000522046 TRIM41Q8WV44 630 aa13.23□□□□□ -0.29
LRP12-206ENST00000522046 TSPYL2Q9H2G4 693 aaPredicted RBP13.23□□□□□ -0.29
LRP12-206ENST00000522046 CEP164Q9UPV0 1460 aa13.23□□□□□ -0.29
LRP12-206ENST00000522046 WIZO95785 1651 aa13.22□□□□□ -0.29
LRP12-206ENST00000522046 RASEFQ8IZ41 740 aa13.21□□□□□ -0.29
LRP12-206ENST00000522046 PHF12Q96QT6 1004 aa13.21□□□□□ -0.29
LRP12-206ENST00000522046 NUBP1P53384 320 aa13.18□□□□□ -0.3
LRP12-206ENST00000522046 FANCD2Q9BXW9 1451 aa13.16□□□□□ -0.3
LRP12-206ENST00000522046 CCDC61Q9Y6R9 512 aa13.16□□□□□ -0.3
LRP12-206ENST00000522046 GALR2O43603 387 aaPredicted RBP13.13□□□□□ -0.31
LRP12-206ENST00000522046 KLHL34Q8N239 644 aa13.13□□□□□ -0.31
LRP12-206ENST00000522046 CFTRP13569 1480 aa13.1□□□□□ -0.31
LRP12-206ENST00000522046 FAM212AQ96EL1 285 aa13.09□□□□□ -0.31
LRP12-206ENST00000522046 DCBLD2Q96PD2 775 aa13.08□□□□□ -0.32
LRP12-206ENST00000522046 TOP2AP11388 1531 aaKnown RBP13.08□□□□□ -0.32
LRP12-206ENST00000522046 PRDM2Q13029 1718 aa13.08□□□□□ -0.32
LRP12-206ENST00000522046 POTEIP0CG38 1075 aa13.06□□□□□ -0.32
LRP12-206ENST00000522046 KIF12Q96FN5 646 aa13.06□□□□□ -0.32
LRP12-206ENST00000522046 MS4A3Q96HJ5 214 aa13.06□□□□□ -0.32
LRP12-206ENST00000522046 IFNLR1Q8IU57 520 aaPredicted RBP13.05□□□□□ -0.32
LRP12-206ENST00000522046 RSF1Q96T23 1441 aaPredicted RBP13.02□□□□□ -0.33
LRP12-206ENST00000522046 URB2Q14146 1524 aaKnown RBP13.02□□□□□ -0.33
LRP12-206ENST00000522046 DCAF8Q5TAQ9 597 aa13.01□□□□□ -0.33
LRP12-206ENST00000522046 MAP3K13O43283 966 aa12.99□□□□□ -0.33
LRP12-206ENST00000522046 SPOCK2Q92563 424 aa12.98□□□□□ -0.33
LRP12-206ENST00000522046 IFT140Q96RY7 1462 aa12.96□□□□□ -0.34
LRP12-206ENST00000522046 GSE1Q14687 1217 aa12.95□□□□□ -0.34
LRP12-206ENST00000522046 SGIP1Q9BQI5 828 aa12.95□□□□□ -0.34
LRP12-206ENST00000522046 RIMBP3CA6NJZ7 1639 aa12.92□□□□□ -0.34
LRP12-206ENST00000522046 RIMBP3BA6NNM3 1639 aa12.92□□□□□ -0.34
LRP12-206ENST00000522046 RIMBP3Q9UFD9 1639 aa12.92□□□□□ -0.34
LRP12-206ENST00000522046 PCDHB13Q9Y5F0 798 aa12.92□□□□□ -0.34
LRP12-206ENST00000522046 ABCC8Q09428 1581 aa12.91□□□□□ -0.34
LRP12-206ENST00000522046 PYGBP11216 843 aa12.89□□□□□ -0.35
LRP12-206ENST00000522046 ASTLQ6HA08 431 aaPredicted RBP12.89□□□□□ -0.35
LRP12-206ENST00000522046 TOPBP1Q92547 1522 aa12.88□□□□□ -0.35
LRP12-206ENST00000522046 EIF4G3O43432 1585 aaKnown RBP12.87□□□□□ -0.35
LRP12-206ENST00000522046 CCDC88BA6NC98 1476 aa12.87□□□□□ -0.35
LRP12-206ENST00000522046 ATMINO43313 823 aaPredicted RBP12.87□□□□□ -0.35
LRP12-206ENST00000522046 ZNF608Q9ULD9 1512 aaPredicted RBP12.87□□□□□ -0.35
LRP12-206ENST00000522046 TRPC6Q9Y210 931 aa12.86□□□□□ -0.35
LRP12-206ENST00000522046 ARHGEF11O15085 1522 aa12.86□□□□□ -0.35
LRP12-206ENST00000522046 DNMBPQ6XZF7 1577 aa12.86□□□□□ -0.35
LRP12-206ENST00000522046 TIE1P35590 1138 aa12.85□□□□□ -0.35
LRP12-206ENST00000522046 IFNL1Q8IU54 200 aa12.85□□□□□ -0.35
LRP12-206ENST00000522046 BMP2KQ9NSY1 1161 aaPredicted RBP12.84□□□□□ -0.35
LRP12-206ENST00000522046 PELP1Q8IZL8 1130 aaKnown RBP12.83□□□□□ -0.36
LRP12-206ENST00000522046 CIZ1Q9ULV3 898 aaPredicted RBP12.83□□□□□ -0.36
LRP12-206ENST00000522046 CHD1O14646 1710 aa12.82□□□□□ -0.36
LRP12-206ENST00000522046 CHRM1P11229 460 aaPredicted RBP12.81□□□□□ -0.36
LRP12-206ENST00000522046 ATN1P54259 1190 aaPredicted RBP12.81□□□□□ -0.36
LRP12-206ENST00000522046 LHX8Q68G74 356 aa12.81□□□□□ -0.36
LRP12-206ENST00000522046 TTLL13PA6NNM8 815 aa12.78□□□□□ -0.36
LRP12-206ENST00000522046 SLC39A7Q92504 469 aa12.78□□□□□ -0.36
LRP12-206ENST00000522046 TARBP1Q13395 1621 aaKnown RBP12.77□□□□□ -0.37
LRP12-206ENST00000522046 CYB5RLQ6IPT4 315 aa12.76□□□□□ -0.37
LRP12-206ENST00000522046 C7P10643 843 aa12.75□□□□□ -0.37
LRP12-206ENST00000522046 PCDHB8Q9UN66 801 aa12.75□□□□□ -0.37
LRP12-206ENST00000522046 AQRO60306 1485 aaKnown RBP eCLIP12.74□□□□□ -0.37
LRP12-206ENST00000522046 ZNF467Q7Z7K2 595 aaPredicted RBP12.74□□□□□ -0.37
LRP12-206ENST00000522046 METRNQ9UJH8 293 aa12.74□□□□□ -0.37
LRP12-206ENST00000522046 POLA1P09884 1462 aaPredicted RBP12.73□□□□□ -0.37
LRP12-206ENST00000522046 TMEM106CQ9BVX2 250 aa12.72□□□□□ -0.37
LRP12-206ENST00000522046 WDR97A6NE52 1622 aa12.72□□□□□ -0.37
LRP12-206ENST00000522046 TRIM35Q9UPQ4 493 aa12.69□□□□□ -0.38
LRP12-206ENST00000522046 ARAP1Q96P48 1450 aa12.69□□□□□ -0.38
LRP12-206ENST00000522046 SOGA1O94964 1423 aa12.68□□□□□ -0.38
LRP12-206ENST00000522046 SYNJ1O43426 1573 aa12.68□□□□□ -0.38
LRP12-206ENST00000522046 SNAPC4Q5SXM2 1469 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms