RNA–Protein interactions for RNA: ENST00000522039.1

HR-208, Transcript of HR, lysine demethylase and nuclear receptor corepressor, human

TSL 4

Gene HR, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HR-208	ENST00000522039	KIAA0586	Q9BVV6	1533 aa		29.59	■■■□□ 2.33
HR-208	ENST00000522039	PRG4	Q92954	1404 aa	Predicted RBP	29.54	■■■□□ 2.32
HR-208	ENST00000522039	JPH4	Q96JJ6	628 aa		29.53	■■■□□ 2.32
HR-208	ENST00000522039	RAPGEF2	Q9Y4G8	1499 aa		29.48	■■■□□ 2.31
HR-208	ENST00000522039	IQGAP2	Q13576	1575 aa		29.43	■■■□□ 2.3
HR-208	ENST00000522039	CTTNBP2	Q8WZ74	1663 aa		29.33	■■■□□ 2.29
HR-208	ENST00000522039	PRX	Q9BXM0	1461 aa		29.31	■■■□□ 2.28
HR-208	ENST00000522039	CARMIL2	Q6F5E8	1435 aa		29.29	■■■□□ 2.28
HR-208	ENST00000522039	EEA1	Q15075	1411 aa		29.28	■■■□□ 2.28
HR-208	ENST00000522039	TRH	P20396	242 aa	Predicted RBP	29.27	■■■□□ 2.28
HR-208	ENST00000522039	UGGT2	Q9NYU1	1516 aa		29.25	■■■□□ 2.27
HR-208	ENST00000522039	ADCY10	Q96PN6	1610 aa		29.2	■■■□□ 2.26
HR-208	ENST00000522039	TNIK	Q9UKE5	1360 aa		29.18	■■■□□ 2.26
HR-208	ENST00000522039	DISP1	Q96F81	1524 aa		29.18	■■■□□ 2.26
HR-208	ENST00000522039	PTPRG	P23470	1445 aa		29.16	■■■□□ 2.26
HR-208	ENST00000522039	CSRNP3	Q8WYN3	585 aa		29.15	■■■□□ 2.26
HR-208	ENST00000522039	KIAA0556	O60303	1618 aa		29.15	■■■□□ 2.26
HR-208	ENST00000522039	MAPKBP1	O60336	1514 aa		29.1	■■■□□ 2.25
HR-208	ENST00000522039	GOLGA3	Q08378	1498 aa		29.08	■■■□□ 2.25
HR-208	ENST00000522039	NPM1	P06748	294 aa	Known RBP eCLIP	29.06	■■■□□ 2.24
HR-208	ENST00000522039	CHIC1	Q5VXU3	224 aa		29.06	■■■□□ 2.24
HR-208	ENST00000522039	UHRF1BP1L	A0JNW5	1464 aa		29.02	■■■□□ 2.24
HR-208	ENST00000522039	KIF21B	O75037	1637 aa		29.02	■■■□□ 2.24
HR-208	ENST00000522039	KIF13A	Q9H1H9	1805 aa		29.01	■■■□□ 2.24
HR-208	ENST00000522039	ABCC2	Q92887	1545 aa		28.99	■■■□□ 2.23
HR-208	ENST00000522039	UACA	Q9BZF9	1416 aa		28.98	■■■□□ 2.23
HR-208	ENST00000522039	TTBK1	Q5TCY1	1321 aa	Predicted RBP	28.96	■■■□□ 2.23
HR-208	ENST00000522039	ABCC10	Q5T3U5	1492 aa		28.93	■■■□□ 2.22
HR-208	ENST00000522039	DIP2B	Q9P265	1576 aa		28.92	■■■□□ 2.22
HR-208	ENST00000522039	FAM9A	Q8IZU1	332 aa	Predicted RBP	28.91	■■■□□ 2.22
HR-208	ENST00000522039	SAMD9	Q5K651	1589 aa		28.88	■■■□□ 2.21
HR-208	ENST00000522039	KDM5B	Q9UGL1	1544 aa		28.86	■■■□□ 2.21
HR-208	ENST00000522039	ABCA8	O94911	1581 aa		28.84	■■■□□ 2.21
HR-208	ENST00000522039	ZCCHC11	Q5TAX3	1644 aa	Known RBP	28.83	■■■□□ 2.21
HR-208	ENST00000522039	PLB1	Q6P1J6	1458 aa		28.81	■■■□□ 2.2
HR-208	ENST00000522039	FAM69C	Q0P6D2	419 aa		28.79	■■■□□ 2.2
HR-208	ENST00000522039	ASXL2	Q76L83	1435 aa		28.78	■■■□□ 2.2
HR-208	ENST00000522039	EFCAB5	A4FU69	1503 aa		28.74	■■■□□ 2.19
HR-208	ENST00000522039	GLI2	P10070	1586 aa		28.73	■■■□□ 2.19
HR-208	ENST00000522039	P3H3	Q8IVL6	736 aa		28.67	■■■□□ 2.18
HR-208	ENST00000522039	RAPGEF6	Q8TEU7	1601 aa		28.65	■■■□□ 2.18
HR-208	ENST00000522039	TSPOAP1	O95153	1857 aa		28.65	■■■□□ 2.18
HR-208	ENST00000522039	WDR7	Q9Y4E6	1490 aa		28.64	■■■□□ 2.17
HR-208	ENST00000522039	EPRS	P07814	1512 aa	Known RBP	28.64	■■■□□ 2.17
HR-208	ENST00000522039	UBTF	P17480	764 aa	Known RBP	28.6	■■■□□ 2.17
HR-208	ENST00000522039	MAP3K4	Q9Y6R4	1608 aa		28.6	■■■□□ 2.17
HR-208	ENST00000522039	FHOD3	Q2V2M9	1422 aa		28.6	■■■□□ 2.17
HR-208	ENST00000522039	RANGAP1	P46060	587 aa	Predicted RBP	28.58	■■■□□ 2.17
HR-208	ENST00000522039	PPRC1	Q5VV67	1664 aa	Known RBP	28.56	■■■□□ 2.16
HR-208	ENST00000522039	KDM6B	O15054	1643 aa		28.53	■■■□□ 2.16
HR-208	ENST00000522039	ATP10B	O94823	1461 aa		28.53	■■■□□ 2.16
HR-208	ENST00000522039	EHMT2	Q96KQ7	1210 aa		28.51	■■■□□ 2.15
HR-208	ENST00000522039	CFAP43	Q8NDM7	1665 aa		28.5	■■■□□ 2.15
HR-208	ENST00000522039	NUP153	P49790	1475 aa	Known RBP	28.49	■■■□□ 2.15
HR-208	ENST00000522039	TEX14	Q8IWB6	1497 aa		28.47	■■■□□ 2.15
HR-208	ENST00000522039	ARHGAP35	Q9NRY4	1499 aa		28.46	■■■□□ 2.15
HR-208	ENST00000522039	FMN1	Q68DA7	1419 aa		28.42	■■■□□ 2.14
HR-208	ENST00000522039	ARID3C	A6NKF2	412 aa		28.4	■■■□□ 2.14
HR-208	ENST00000522039	MAGI3	Q5TCQ9	1506 aa		28.38	■■■□□ 2.13
HR-208	ENST00000522039	ABCA9	Q8IUA7	1624 aa		28.36	■■■□□ 2.13
HR-208	ENST00000522039	CD109	Q6YHK3	1445 aa		28.36	■■■□□ 2.13
HR-208	ENST00000522039	KCNH8	Q96L42	1107 aa		28.36	■■■□□ 2.13
HR-208	ENST00000522039	HECW1	Q76N89	1606 aa		28.36	■■■□□ 2.13
HR-208	ENST00000522039	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	28.33	■■■□□ 2.13
HR-208	ENST00000522039	HNRNPUL2	Q1KMD3	747 aa	Known RBP	28.33	■■■□□ 2.13
HR-208	ENST00000522039	CDK13	Q14004	1512 aa	Known RBP	28.25	■■■□□ 2.11
HR-208	ENST00000522039	PLEKHD1	A6NEE1	506 aa		28.23	■■■□□ 2.11
HR-208	ENST00000522039	COL17A1	Q9UMD9	1497 aa	Predicted RBP	28.21	■■■□□ 2.11
HR-208	ENST00000522039	CLIP1	P30622	1438 aa		28.2	■■■□□ 2.11
HR-208	ENST00000522039	PCF11	O94913	1555 aa	Known RBP	28.18	■■■□□ 2.1
HR-208	ENST00000522039	LRRIQ1	Q96JM4	1722 aa		28.17	■■■□□ 2.1
HR-208	ENST00000522039	PHLDB1	Q86UU1	1377 aa		28.15	■■■□□ 2.1
HR-208	ENST00000522039	CASKIN1	Q8WXD9	1431 aa		28.15	■■■□□ 2.1
HR-208	ENST00000522039	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	28.14	■■■□□ 2.1
HR-208	ENST00000522039	ARAP3	Q8WWN8	1544 aa		28.13	■■■□□ 2.09
HR-208	ENST00000522039	ATP1B4	Q9UN42	357 aa	Predicted RBP	28.13	■■■□□ 2.09
HR-208	ENST00000522039	CCDC18	Q5T9S5	1454 aa		28.13	■■■□□ 2.09
HR-208	ENST00000522039	NEO1	Q92859	1461 aa		28.13	■■■□□ 2.09
HR-208	ENST00000522039	CFAP74	Q9C0B2	1584 aa		28.12	■■■□□ 2.09
HR-208	ENST00000522039	FYCO1	Q9BQS8	1478 aa		28.12	■■■□□ 2.09
HR-208	ENST00000522039	TTC37	Q6PGP7	1564 aa		28.11	■■■□□ 2.09
HR-208	ENST00000522039	CDK11A	Q9UQ88	783 aa	Predicted RBP	28.1	■■■□□ 2.09
HR-208	ENST00000522039	KIF14	Q15058	1648 aa		28.07	■■■□□ 2.08
HR-208	ENST00000522039	TRO	Q12816	1431 aa	Predicted RBP	28.04	■■■□□ 2.08
HR-208	ENST00000522039	CEP162	Q5TB80	1403 aa		28.02	■■■□□ 2.08
HR-208	ENST00000522039	MYO5C	Q9NQX4	1742 aa		28.02	■■■□□ 2.08
HR-208	ENST00000522039	FANCA	O15360	1455 aa		28.01	■■■□□ 2.07
HR-208	ENST00000522039	AEBP2	Q6ZN18	517 aa	Predicted RBP	28	■■■□□ 2.07
HR-208	ENST00000522039	PLCH2	O75038	1416 aa		27.95	■■■□□ 2.07
HR-208	ENST00000522039	FRMPD1	Q5SYB0	1578 aa		27.94	■■■□□ 2.06
HR-208	ENST00000522039	AKNA	Q7Z591	1439 aa		27.93	■■■□□ 2.06
HR-208	ENST00000522039	RICTOR	Q6R327	1708 aa		27.92	■■■□□ 2.06
HR-208	ENST00000522039	DENND4B	O75064	1496 aa	Predicted RBP	27.89	■■■□□ 2.06
HR-208	ENST00000522039	ADGRL1	O94910	1474 aa		27.86	■■■□□ 2.05
HR-208	ENST00000522039	PREX2	Q70Z35	1606 aa		27.85	■■■□□ 2.05
HR-208	ENST00000522039	RAPGEF3	O95398	923 aa		27.85	■■■□□ 2.05
HR-208	ENST00000522039	ARHGAP5	Q13017	1502 aa		27.83	■■■□□ 2.05
HR-208	ENST00000522039	ZMYM4	Q5VZL5	1548 aa		27.83	■■■□□ 2.05
HR-208	ENST00000522039	KDM4F	A0A1W2PPD8	638 aa		27.83	■■■□□ 2.05
HR-208	ENST00000522039	CDC42BPB	Q9Y5S2	1711 aa		27.82	■■■□□ 2.04

Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms