RNA–Protein interactions for RNA: ENST00000521724.5

CTNNA1-230, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 2,741 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-230ENST00000521724 MSH5O43196 834 aa13.64□□□□□ -0.23
CTNNA1-230ENST00000521724 ERICH6Q7L0X2 663 aa13.62□□□□□ -0.23
CTNNA1-230ENST00000521724 KANK4Q5T7N3 995 aaPredicted RBP13.6□□□□□ -0.23
CTNNA1-230ENST00000521724 TOP2BQ02880 1626 aa13.57□□□□□ -0.24
CTNNA1-230ENST00000521724 FANCIQ9NVI1 1328 aa13.56□□□□□ -0.24
CTNNA1-230ENST00000521724 ZBTB22O15209 634 aa13.55□□□□□ -0.24
CTNNA1-230ENST00000521724 DDX10Q13206 875 aaKnown RBP13.55□□□□□ -0.24
CTNNA1-230ENST00000521724 TRIM52Q96A61 297 aa13.54□□□□□ -0.24
CTNNA1-230ENST00000521724 ARAP1Q96P48 1450 aa13.53□□□□□ -0.24
CTNNA1-230ENST00000521724 PRXQ9BXM0 1461 aa13.52□□□□□ -0.24
CTNNA1-230ENST00000521724 PLCB2Q00722 1185 aa13.52□□□□□ -0.25
CTNNA1-230ENST00000521724 MYT1LQ9UL68 1186 aa13.52□□□□□ -0.25
CTNNA1-230ENST00000521724 CDK11AQ9UQ88 783 aaPredicted RBP13.5□□□□□ -0.25
CTNNA1-230ENST00000521724 BIVM-ERCC5R4GMW8 1640 aa13.49□□□□□ -0.25
CTNNA1-230ENST00000521724 HOMEZQ8IX15 550 aa13.49□□□□□ -0.25
CTNNA1-230ENST00000521724 CUX1P39880 1505 aa13.48□□□□□ -0.25
CTNNA1-230ENST00000521724 DEKP35659 375 aaKnown RBP13.46□□□□□ -0.25
CTNNA1-230ENST00000521724 HAP1P54257 671 aaPredicted RBP13.46□□□□□ -0.25
CTNNA1-230ENST00000521724 CCER2I3L3R5 266 aa13.45□□□□□ -0.26
CTNNA1-230ENST00000521724 ERICH3Q5RHP9 1530 aa13.45□□□□□ -0.26
CTNNA1-230ENST00000521724 ANP32CO43423 234 aa13.44□□□□□ -0.26
CTNNA1-230ENST00000521724 CUX2O14529 1486 aa13.43□□□□□ -0.26
CTNNA1-230ENST00000521724 RRBP1Q9P2E9 1410 aaKnown RBP13.43□□□□□ -0.26
CTNNA1-230ENST00000521724 PPP1R15AO75807 674 aaPredicted RBP13.42□□□□□ -0.26
CTNNA1-230ENST00000521724 NCAPD3P42695 1498 aa13.41□□□□□ -0.26
CTNNA1-230ENST00000521724 KIF27Q86VH2 1401 aa13.4□□□□□ -0.26
CTNNA1-230ENST00000521724 ARHGAP35Q9NRY4 1499 aa13.4□□□□□ -0.26
CTNNA1-230ENST00000521724 CCNB3Q8WWL7 1395 aa13.38□□□□□ -0.27
CTNNA1-230ENST00000521724 IRX6P78412 446 aaPredicted RBP13.38□□□□□ -0.27
CTNNA1-230ENST00000521724 WDR97A6NE52 1622 aa13.38□□□□□ -0.27
CTNNA1-230ENST00000521724 MAPKBP1O60336 1514 aa13.37□□□□□ -0.27
CTNNA1-230ENST00000521724 RAB3GAP2Q9H2M9 1393 aa13.37□□□□□ -0.27
CTNNA1-230ENST00000521724 HIRIP3Q9BW71 556 aaPredicted RBP13.36□□□□□ -0.27
CTNNA1-230ENST00000521724 CFTRP13569 1480 aa13.36□□□□□ -0.27
CTNNA1-230ENST00000521724 HMGXB3Q12766 1538 aa13.35□□□□□ -0.27
CTNNA1-230ENST00000521724 IGF1RP08069 1367 aa13.33□□□□□ -0.28
CTNNA1-230ENST00000521724 SIN3AQ96ST3 1273 aa13.33□□□□□ -0.28
CTNNA1-230ENST00000521724 ANO8Q9HCE9 1232 aaPredicted RBP13.33□□□□□ -0.28
CTNNA1-230ENST00000521724 HNRNPUQ00839 825 aaKnown RBP eCLIP13.32□□□□□ -0.28
CTNNA1-230ENST00000521724 NBR1Q14596 966 aa13.31□□□□□ -0.28
CTNNA1-230ENST00000521724 PODXL2Q9NZ53 605 aa13.3□□□□□ -0.28
CTNNA1-230ENST00000521724 KLHL34Q8N239 644 aa13.29□□□□□ -0.28
CTNNA1-230ENST00000521724 PPP4R2Q9NY27 417 aa13.29□□□□□ -0.28
CTNNA1-230ENST00000521724 ERICH6BQ5W0A0 696 aa13.28□□□□□ -0.28
CTNNA1-230ENST00000521724 P3H3Q8IVL6 736 aa13.28□□□□□ -0.28
CTNNA1-230ENST00000521724 NOP58Q9Y2X3 529 aaKnown RBP13.28□□□□□ -0.28
CTNNA1-230ENST00000521724 SETD5Q9C0A6 1442 aa13.26□□□□□ -0.29
CTNNA1-230ENST00000521724 CARMIL1Q5VZK9 1371 aa13.25□□□□□ -0.29
CTNNA1-230ENST00000521724 PHLDB1Q86UU1 1377 aa13.24□□□□□ -0.29
CTNNA1-230ENST00000521724 PAK3O75914 559 aaPredicted RBP13.22□□□□□ -0.29
CTNNA1-230ENST00000521724 FAM50AQ14320 339 aaKnown RBP13.22□□□□□ -0.29
CTNNA1-230ENST00000521724 ATP1B4Q9UN42 357 aaPredicted RBP13.22□□□□□ -0.29
CTNNA1-230ENST00000521724 SALL2Q9Y467 1007 aaPredicted RBP13.22□□□□□ -0.29
CTNNA1-230ENST00000521724 FGD5Q6ZNL6 1462 aa13.21□□□□□ -0.29
CTNNA1-230ENST00000521724 B4GALNT3Q6L9W6 998 aa13.21□□□□□ -0.29
CTNNA1-230ENST00000521724 TIAM1Q13009 1591 aa13.21□□□□□ -0.29
CTNNA1-230ENST00000521724 CC2D2AQ9P2K1 1620 aa13.21□□□□□ -0.3
CTNNA1-230ENST00000521724 RTL5Q5HYW3 569 aaPredicted RBP13.2□□□□□ -0.3
CTNNA1-230ENST00000521724 CADPSQ9ULU8 1353 aa13.2□□□□□ -0.3
CTNNA1-230ENST00000521724 LRRC9Q6ZRR7 1453 aa13.19□□□□□ -0.3
CTNNA1-230ENST00000521724 NESP48681 1621 aa13.16□□□□□ -0.3
CTNNA1-230ENST00000521724 DNAJC5BQ9UF47 199 aa13.15□□□□□ -0.3
CTNNA1-230ENST00000521724 ANP32AP39687 249 aaKnown RBP13.14□□□□□ -0.31
CTNNA1-230ENST00000521724 TONSLQ96HA7 1378 aa13.14□□□□□ -0.31
CTNNA1-230ENST00000521724 FHOD3Q2V2M9 1422 aa13.14□□□□□ -0.31
CTNNA1-230ENST00000521724 RAD54L2Q9Y4B4 1467 aa13.14□□□□□ -0.31
CTNNA1-230ENST00000521724 MAP3K1Q13233 1512 aa13.13□□□□□ -0.31
CTNNA1-230ENST00000521724 PRDM2Q13029 1718 aa13.13□□□□□ -0.31
CTNNA1-230ENST00000521724 IL27Q8NEV9 243 aa13.13□□□□□ -0.31
CTNNA1-230ENST00000521724 CCDC136Q96JN2 1154 aa13.13□□□□□ -0.31
CTNNA1-230ENST00000521724 IPO9Q96P70 1041 aaKnown RBP13.12□□□□□ -0.31
CTNNA1-230ENST00000521724 PCF11O94913 1555 aaKnown RBP13.12□□□□□ -0.31
CTNNA1-230ENST00000521724 ZBTB47Q9UFB7 747 aaPredicted RBP13.12□□□□□ -0.31
CTNNA1-230ENST00000521724 FANCD2Q9BXW9 1451 aa13.1□□□□□ -0.31
CTNNA1-230ENST00000521724 NPM3O75607 178 aaKnown RBP13.08□□□□□ -0.32
CTNNA1-230ENST00000521724 FHAD1B1AJZ9 1412 aa13.07□□□□□ -0.32
CTNNA1-230ENST00000521724 FAM9BQ8IZU0 186 aa13.07□□□□□ -0.32
CTNNA1-230ENST00000521724 CFAP43Q8NDM7 1665 aa13.05□□□□□ -0.32
CTNNA1-230ENST00000521724 CCDC184Q52MB2 194 aa13.05□□□□□ -0.32
CTNNA1-230ENST00000521724 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.04□□□□□ -0.32
CTNNA1-230ENST00000521724 ZBED9Q6R2W3 1325 aa13.04□□□□□ -0.32
CTNNA1-230ENST00000521724 PTPRKQ15262 1439 aa13.03□□□□□ -0.32
CTNNA1-230ENST00000521724 POLA1P09884 1462 aaPredicted RBP13.03□□□□□ -0.32
CTNNA1-230ENST00000521724 WASHC2AQ641Q2 1341 aa13.03□□□□□ -0.32
CTNNA1-230ENST00000521724 TMEM132AQ24JP5 1023 aa13.01□□□□□ -0.33
CTNNA1-230ENST00000521724 MRS2Q9HD23 443 aa13.01□□□□□ -0.33
CTNNA1-230ENST00000521724 CASKIN1Q8WXD9 1431 aa13.01□□□□□ -0.33
CTNNA1-230ENST00000521724 TOPBP1Q92547 1522 aa13.01□□□□□ -0.33
CTNNA1-230ENST00000521724 ABCA10Q8WWZ4 1543 aa13□□□□□ -0.33
CTNNA1-230ENST00000521724 UBE2Q2Q8WVN8 375 aa13□□□□□ -0.33
CTNNA1-230ENST00000521724 VSIG10Q8N0Z9 540 aa12.99□□□□□ -0.33
CTNNA1-230ENST00000521724 KDM2AQ9Y2K7 1162 aa12.99□□□□□ -0.33
CTNNA1-230ENST00000521724 FYCO1Q9BQS8 1478 aa12.99□□□□□ -0.33
CTNNA1-230ENST00000521724 HSPA5P11021 654 aaKnown RBP12.98□□□□□ -0.33
CTNNA1-230ENST00000521724 PRKRIP1Q9H875 184 aaPredicted RBP12.98□□□□□ -0.33
CTNNA1-230ENST00000521724 FGD6Q6ZV73 1430 aa12.98□□□□□ -0.33
CTNNA1-230ENST00000521724 NEFMP07197 916 aa12.97□□□□□ -0.33
CTNNA1-230ENST00000521724 DNMBPQ6XZF7 1577 aa12.97□□□□□ -0.33
CTNNA1-230ENST00000521724 TDRD9Q8NDG6 1382 aaKnown RBP12.97□□□□□ -0.33
CTNNA1-230ENST00000521724 C14orf37Q86TY3 774 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms