RNA–Protein interactions for RNA: ENST00000521578.5

PTP4A3-204, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTP4A3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-204ENST00000521578 KIAA0586Q9BVV6 1533 aa35.64■■■■□ 3.3
PTP4A3-204ENST00000521578 UBTFP17480 764 aaKnown RBP35.64■■■■□ 3.3
PTP4A3-204ENST00000521578 CTTNBP2Q8WZ74 1663 aa35.6■■■■□ 3.29
PTP4A3-204ENST00000521578 IQGAP2Q13576 1575 aa35.55■■■■□ 3.28
PTP4A3-204ENST00000521578 LOC105371045A0A1W2PR82 267 aa35.54■■■■□ 3.28
PTP4A3-204ENST00000521578 JPH4Q96JJ6 628 aa35.53■■■■□ 3.28
PTP4A3-204ENST00000521578 DNAJC5Q9H3Z4 198 aa35.46■■■■□ 3.27
PTP4A3-204ENST00000521578 SHROOM2Q13796 1616 aa35.46■■■■□ 3.27
PTP4A3-204ENST00000521578 RANGAP1P46060 587 aaPredicted RBP35.43■■■■□ 3.26
PTP4A3-204ENST00000521578 PRG4Q92954 1404 aaPredicted RBP35.4■■■■□ 3.26
PTP4A3-204ENST00000521578 TNIKQ9UKE5 1360 aa35.36■■■■□ 3.25
PTP4A3-204ENST00000521578 UGGT2Q9NYU1 1516 aa35.35■■■■□ 3.25
PTP4A3-204ENST00000521578 ERCC6L2Q5T890 1561 aa35.35■■■■□ 3.25
PTP4A3-204ENST00000521578 ARHGEF11O15085 1522 aa35.34■■■■□ 3.25
PTP4A3-204ENST00000521578 RIMBP3CA6NJZ7 1639 aa35.28■■■■□ 3.24
PTP4A3-204ENST00000521578 RIMBP3BA6NNM3 1639 aa35.28■■■■□ 3.24
PTP4A3-204ENST00000521578 RIMBP3Q9UFD9 1639 aa35.28■■■■□ 3.24
PTP4A3-204ENST00000521578 DISP1Q96F81 1524 aa35.27■■■■□ 3.24
PTP4A3-204ENST00000521578 CARMIL2Q6F5E8 1435 aa35.26■■■■□ 3.23
PTP4A3-204ENST00000521578 P3H3Q8IVL6 736 aa35.21■■■■□ 3.23
PTP4A3-204ENST00000521578 KIAA0556O60303 1618 aa35.2■■■■□ 3.23
PTP4A3-204ENST00000521578 TTBK1Q5TCY1 1321 aaPredicted RBP35.17■■■■□ 3.22
PTP4A3-204ENST00000521578 SAMD9Q5K651 1589 aa35.17■■■■□ 3.22
PTP4A3-204ENST00000521578 EFCAB5A4FU69 1503 aa35.12■■■■□ 3.21
PTP4A3-204ENST00000521578 ARAP1Q96P48 1450 aa35.11■■■■□ 3.21
PTP4A3-204ENST00000521578 CLIP1P30622 1438 aa35.1■■■■□ 3.21
PTP4A3-204ENST00000521578 CEP162Q5TB80 1403 aa35.1■■■■□ 3.21
PTP4A3-204ENST00000521578 ARHGAP35Q9NRY4 1499 aa35.1■■■■□ 3.21
PTP4A3-204ENST00000521578 CYB5RLQ6IPT4 315 aa35.06■■■■□ 3.2
PTP4A3-204ENST00000521578 FHOD3Q2V2M9 1422 aa35.06■■■■□ 3.2
PTP4A3-204ENST00000521578 PTPRGP23470 1445 aa35.05■■■■□ 3.2
PTP4A3-204ENST00000521578 PLB1Q6P1J6 1458 aa34.85■■■■□ 3.17
PTP4A3-204ENST00000521578 UACAQ9BZF9 1416 aa34.82■■■■□ 3.16
PTP4A3-204ENST00000521578 FMN1Q68DA7 1419 aa34.81■■■■□ 3.16
PTP4A3-204ENST00000521578 ABCA8O94911 1581 aa34.77■■■■□ 3.16
PTP4A3-204ENST00000521578 ADCY10Q96PN6 1610 aa34.76■■■■□ 3.15
PTP4A3-204ENST00000521578 ABCC2Q92887 1545 aa34.73■■■■□ 3.15
PTP4A3-204ENST00000521578 RAPGEF6Q8TEU7 1601 aa34.73■■■■□ 3.15
PTP4A3-204ENST00000521578 UHRF1BP1LA0JNW5 1464 aa34.7■■■■□ 3.15
PTP4A3-204ENST00000521578 ATP1B4Q9UN42 357 aaPredicted RBP34.69■■■■□ 3.14
PTP4A3-204ENST00000521578 ARID3CA6NKF2 412 aa34.67■■■■□ 3.14
PTP4A3-204ENST00000521578 PCF11O94913 1555 aaKnown RBP34.64■■■■□ 3.14
PTP4A3-204ENST00000521578 NUP153P49790 1475 aaKnown RBP34.62■■■■□ 3.13
PTP4A3-204ENST00000521578 CASKIN1Q8WXD9 1431 aa34.61■■■■□ 3.13
PTP4A3-204ENST00000521578 VPS8Q8N3P4 1428 aa34.61■■■■□ 3.13
PTP4A3-204ENST00000521578 NPM1P06748 294 aaKnown RBP eCLIP34.61■■■■□ 3.13
PTP4A3-204ENST00000521578 PCGF6Q9BYE7 350 aa34.59■■■■□ 3.13
PTP4A3-204ENST00000521578 HECW1Q76N89 1606 aa34.57■■■■□ 3.12
PTP4A3-204ENST00000521578 KDM5BQ9UGL1 1544 aa34.56■■■■□ 3.12
PTP4A3-204ENST00000521578 FYCO1Q9BQS8 1478 aa34.55■■■■□ 3.12
PTP4A3-204ENST00000521578 ZCCHC11Q5TAX3 1644 aaKnown RBP34.52■■■■□ 3.12
PTP4A3-204ENST00000521578 ATP10BO94823 1461 aa34.52■■■■□ 3.12
PTP4A3-204ENST00000521578 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.52■■■■□ 3.12
PTP4A3-204ENST00000521578 HNRNPUL2Q1KMD3 747 aaKnown RBP34.52■■■■□ 3.12
PTP4A3-204ENST00000521578 EPRSP07814 1512 aaKnown RBP34.48■■■■□ 3.11
PTP4A3-204ENST00000521578 LRRIQ1Q96JM4 1722 aa34.48■■■■□ 3.11
PTP4A3-204ENST00000521578 CDK13Q14004 1512 aaKnown RBP34.48■■■■□ 3.11
PTP4A3-204ENST00000521578 TRIM26Q12899 539 aaPredicted RBP34.44■■■■□ 3.1
PTP4A3-204ENST00000521578 CCDC18Q5T9S5 1454 aa34.39■■■■□ 3.1
PTP4A3-204ENST00000521578 ASXL2Q76L83 1435 aa34.38■■■■□ 3.09
PTP4A3-204ENST00000521578 MAPKBP1O60336 1514 aa34.36■■■■□ 3.09
PTP4A3-204ENST00000521578 PLEKHD1A6NEE1 506 aa34.3■■■■□ 3.08
PTP4A3-204ENST00000521578 CDK11AQ9UQ88 783 aaPredicted RBP34.28■■■■□ 3.08
PTP4A3-204ENST00000521578 WDR7Q9Y4E6 1490 aa34.28■■■■□ 3.08
PTP4A3-204ENST00000521578 APLP2Q06481 763 aa34.27■■■■□ 3.08
PTP4A3-204ENST00000521578 KCNH8Q96L42 1107 aa34.25■■■■□ 3.07
PTP4A3-204ENST00000521578 TIAM1Q13009 1591 aa34.24■■■■□ 3.07
PTP4A3-204ENST00000521578 CFAP43Q8NDM7 1665 aa34.23■■■■□ 3.07
PTP4A3-204ENST00000521578 HRCP23327 699 aa34.23■■■■□ 3.07
PTP4A3-204ENST00000521578 MAGI3Q5TCQ9 1506 aa34.2■■■■□ 3.07
PTP4A3-204ENST00000521578 MAP3K1Q13233 1512 aa34.17■■■■□ 3.06
PTP4A3-204ENST00000521578 TROQ12816 1431 aaPredicted RBP34.16■■■■□ 3.06
PTP4A3-204ENST00000521578 MTUS2Q5JR59 1369 aa34.16■■■■□ 3.06
PTP4A3-204ENST00000521578 ABCC10Q5T3U5 1492 aa34.16■■■■□ 3.06
PTP4A3-204ENST00000521578 TRHP20396 242 aaPredicted RBP34.15■■■■□ 3.06
PTP4A3-204ENST00000521578 FAM69CQ0P6D2 419 aa34.13■■■■□ 3.05
PTP4A3-204ENST00000521578 KANK4Q5T7N3 995 aaPredicted RBP34.13■■■■□ 3.05
PTP4A3-204ENST00000521578 DIP2BQ9P265 1576 aa34.12■■■■□ 3.05
PTP4A3-204ENST00000521578 LRRC9Q6ZRR7 1453 aa34.09■■■■□ 3.05
PTP4A3-204ENST00000521578 KIF13AQ9H1H9 1805 aa34.08■■■■□ 3.05
PTP4A3-204ENST00000521578 KIF14Q15058 1648 aa34.07■■■■□ 3.04
PTP4A3-204ENST00000521578 EHBP1L1Q8N3D4 1523 aa34.06■■■■□ 3.04
PTP4A3-204ENST00000521578 GLI2P10070 1586 aa34.02■■■■□ 3.04
PTP4A3-204ENST00000521578 PPARGC1BQ86YN6 1023 aaKnown RBP34.01■■■■□ 3.03
PTP4A3-204ENST00000521578 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.99■■■■□ 3.031e-6■■■■□ 24.8
PTP4A3-204ENST00000521578 ABCA9Q8IUA7 1624 aa33.97■■■■□ 3.03
PTP4A3-204ENST00000521578 TTC37Q6PGP7 1564 aa33.97■■■■□ 3.03
PTP4A3-204ENST00000521578 SUPT6HQ7KZ85 1726 aaKnown RBP33.93■■■■□ 3.02
PTP4A3-204ENST00000521578 MAP3K4Q9Y6R4 1608 aa33.92■■■■□ 3.02
PTP4A3-204ENST00000521578 CD109Q6YHK3 1445 aa33.92■■■■□ 3.02
PTP4A3-204ENST00000521578 TSPOAP1O95153 1857 aa33.9■■■■□ 3.02
PTP4A3-204ENST00000521578 NCOA2Q15596 1464 aa33.9■■■■□ 3.02
PTP4A3-204ENST00000521578 CCNB3Q8WWL7 1395 aa33.83■■■■□ 3.01
PTP4A3-204ENST00000521578 MYO5CQ9NQX4 1742 aa33.82■■■■□ 3
PTP4A3-204ENST00000521578 CDC42BPAQ5VT25 1732 aa33.79■■■■□ 3
PTP4A3-204ENST00000521578 PLCH2O75038 1416 aa33.79■■■■□ 3
PTP4A3-204ENST00000521578 PPRC1Q5VV67 1664 aaKnown RBP33.79■■■■□ 3
PTP4A3-204ENST00000521578 GPATCH8Q9UKJ3 1502 aaKnown RBP33.78■■■■□ 3
PTP4A3-204ENST00000521578 PREX2Q70Z35 1606 aa33.75■■■□□ 2.99
PTP4A3-204ENST00000521578 CDC42BPBQ9Y5S2 1711 aa33.74■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms