RNA–Protein interactions for RNA: ENST00000521550.5

SPIDR-214, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,849 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-214ENST00000521550 TNIKQ9UKE5 1360 aa21.99■■□□□ 1.11
SPIDR-214ENST00000521550 GOLGA3Q08378 1498 aa21.95■■□□□ 1.1
SPIDR-214ENST00000521550 NUP160Q12769 1436 aa21.92■■□□□ 1.1
SPIDR-214ENST00000521550 CEP170Q5SW79 1584 aa21.92■■□□□ 1.1
SPIDR-214ENST00000521550 UBTFP17480 764 aaKnown RBP21.9■■□□□ 1.1
SPIDR-214ENST00000521550 RUSC2Q8N2Y8 1516 aa21.89■■□□□ 1.1
SPIDR-214ENST00000521550 CEP162Q5TB80 1403 aa21.88■■□□□ 1.09
SPIDR-214ENST00000521550 KIF21BO75037 1637 aa21.86■■□□□ 1.09
SPIDR-214ENST00000521550 KIF27Q86VH2 1401 aa21.85■■□□□ 1.09
SPIDR-214ENST00000521550 SHROOM2Q13796 1616 aa21.81■■□□□ 1.08
SPIDR-214ENST00000521550 ERCC6L2Q5T890 1561 aa21.8■■□□□ 1.08
SPIDR-214ENST00000521550 ZEB1P37275 1124 aaPredicted RBP21.79■■□□□ 1.08
SPIDR-214ENST00000521550 IGF1RP08069 1367 aa21.79■■□□□ 1.08
SPIDR-214ENST00000521550 CUL7Q14999 1698 aa21.77■■□□□ 1.08
SPIDR-214ENST00000521550 TRHP20396 242 aaPredicted RBP21.76■■□□□ 1.07
SPIDR-214ENST00000521550 JPH4Q96JJ6 628 aa21.72■■□□□ 1.07
SPIDR-214ENST00000521550 PRG4Q92954 1404 aaPredicted RBP21.7■■□□□ 1.06
SPIDR-214ENST00000521550 CARMIL1Q5VZK9 1371 aa21.66■■□□□ 1.06
SPIDR-214ENST00000521550 KIAA0586Q9BVV6 1533 aa21.64■■□□□ 1.05
SPIDR-214ENST00000521550 CLIP1P30622 1438 aa21.61■■□□□ 1.05
SPIDR-214ENST00000521550 RAPGEF2Q9Y4G8 1499 aa21.6■■□□□ 1.05
SPIDR-214ENST00000521550 PPARGC1BQ86YN6 1023 aaKnown RBP21.59■■□□□ 1.05
SPIDR-214ENST00000521550 PRXQ9BXM0 1461 aa21.55■■□□□ 1.04
SPIDR-214ENST00000521550 APLP2Q06481 763 aa21.5■■□□□ 1.03
SPIDR-214ENST00000521550 VPS8Q8N3P4 1428 aa21.5■■□□□ 1.03
SPIDR-214ENST00000521550 IQGAP2Q13576 1575 aa21.49■■□□□ 1.03
SPIDR-214ENST00000521550 CARMIL2Q6F5E8 1435 aa21.44■■□□□ 1.02
SPIDR-214ENST00000521550 NPM1P06748 294 aaKnown RBP eCLIP21.42■■□□□ 1.02
SPIDR-214ENST00000521550 ADCY10Q96PN6 1610 aa21.42■■□□□ 1.02
SPIDR-214ENST00000521550 PTPRGP23470 1445 aa21.4■■□□□ 1.02
SPIDR-214ENST00000521550 KIF13AQ9H1H9 1805 aa21.37■■□□□ 1.01
SPIDR-214ENST00000521550 TTBK1Q5TCY1 1321 aaPredicted RBP21.37■■□□□ 1.01
SPIDR-214ENST00000521550 CTTNBP2Q8WZ74 1663 aa21.35■■□□□ 1.01
SPIDR-214ENST00000521550 MAPKBP1O60336 1514 aa21.34■■□□□ 1.01
SPIDR-214ENST00000521550 DISP1Q96F81 1524 aa21.34■■□□□ 1.01
SPIDR-214ENST00000521550 UGGT2Q9NYU1 1516 aa21.34■■□□□ 1.01
SPIDR-214ENST00000521550 CCER1Q8TC90 406 aaPredicted RBP21.32■■□□□ 1
SPIDR-214ENST00000521550 RANGAP1P46060 587 aaPredicted RBP21.31■■□□□ 1
SPIDR-214ENST00000521550 ABCC10Q5T3U5 1492 aa21.29■■□□□ 1
SPIDR-214ENST00000521550 KIAA0556O60303 1618 aa21.28■■□□□ 1
SPIDR-214ENST00000521550 FAM69CQ0P6D2 419 aa21.27■■□□□ 1
SPIDR-214ENST00000521550 DIP2BQ9P265 1576 aa21.25■□□□□ 0.99
SPIDR-214ENST00000521550 ABCC2Q92887 1545 aa21.25■□□□□ 0.99
SPIDR-214ENST00000521550 UACAQ9BZF9 1416 aa21.24■□□□□ 0.99
SPIDR-214ENST00000521550 UHRF1BP1LA0JNW5 1464 aa21.23■□□□□ 0.99
SPIDR-214ENST00000521550 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.21■□□□□ 0.99
SPIDR-214ENST00000521550 ASXL2Q76L83 1435 aa21.15■□□□□ 0.98
SPIDR-214ENST00000521550 TSPOAP1O95153 1857 aa21.15■□□□□ 0.98
SPIDR-214ENST00000521550 PLB1Q6P1J6 1458 aa21.14■□□□□ 0.98
SPIDR-214ENST00000521550 ARHGAP35Q9NRY4 1499 aa21.14■□□□□ 0.98
SPIDR-214ENST00000521550 KDM5BQ9UGL1 1544 aa21.14■□□□□ 0.97
SPIDR-214ENST00000521550 ZCCHC11Q5TAX3 1644 aaKnown RBP21.12■□□□□ 0.97
SPIDR-214ENST00000521550 GLI2P10070 1586 aa21.06■□□□□ 0.96
SPIDR-214ENST00000521550 ABCA8O94911 1581 aa21.06■□□□□ 0.96
SPIDR-214ENST00000521550 P3H3Q8IVL6 736 aa21.04■□□□□ 0.96
SPIDR-214ENST00000521550 MAP3K1Q13233 1512 aa21.03■□□□□ 0.96
SPIDR-214ENST00000521550 HNRNPUL2Q1KMD3 747 aaKnown RBP21.03■□□□□ 0.96
SPIDR-214ENST00000521550 KDM6BO15054 1643 aa21.02■□□□□ 0.95
SPIDR-214ENST00000521550 SAMD9Q5K651 1589 aa21.02■□□□□ 0.95
SPIDR-214ENST00000521550 EPRSP07814 1512 aaKnown RBP21.02■□□□□ 0.95
SPIDR-214ENST00000521550 EFCAB5A4FU69 1503 aa21■□□□□ 0.95
SPIDR-214ENST00000521550 WDR7Q9Y4E6 1490 aa20.99■□□□□ 0.95
SPIDR-214ENST00000521550 PPRC1Q5VV67 1664 aaKnown RBP20.98■□□□□ 0.95
SPIDR-214ENST00000521550 MAP3K4Q9Y6R4 1608 aa20.97■□□□□ 0.95
SPIDR-214ENST00000521550 KANK4Q5T7N3 995 aaPredicted RBP20.94■□□□□ 0.94
SPIDR-214ENST00000521550 AEBP2Q6ZN18 517 aaPredicted RBP20.93■□□□□ 0.94
SPIDR-214ENST00000521550 RRBP1Q9P2E9 1410 aaKnown RBP20.93■□□□□ 0.94
SPIDR-214ENST00000521550 TIAM1Q13009 1591 aa20.91■□□□□ 0.94
SPIDR-214ENST00000521550 RAPGEF6Q8TEU7 1601 aa20.9■□□□□ 0.94
SPIDR-214ENST00000521550 TEX14Q8IWB6 1497 aa20.9■□□□□ 0.94
SPIDR-214ENST00000521550 ARID3CA6NKF2 412 aa20.9■□□□□ 0.94
SPIDR-214ENST00000521550 KCNH8Q96L42 1107 aa20.9■□□□□ 0.94
SPIDR-214ENST00000521550 ATP10BO94823 1461 aa20.88■□□□□ 0.93
SPIDR-214ENST00000521550 FHOD3Q2V2M9 1422 aa20.88■□□□□ 0.93
SPIDR-214ENST00000521550 CFAP43Q8NDM7 1665 aa20.87■□□□□ 0.93
SPIDR-214ENST00000521550 CCNB3Q8WWL7 1395 aa20.86■□□□□ 0.93
SPIDR-214ENST00000521550 FMN1Q68DA7 1419 aa20.85■□□□□ 0.93
SPIDR-214ENST00000521550 FYCO1Q9BQS8 1478 aa20.85■□□□□ 0.93
SPIDR-214ENST00000521550 CD109Q6YHK3 1445 aa20.84■□□□□ 0.93
SPIDR-214ENST00000521550 CLSPNQ9HAW4 1339 aa20.84■□□□□ 0.93
SPIDR-214ENST00000521550 LRRC9Q6ZRR7 1453 aa20.83■□□□□ 0.92
SPIDR-214ENST00000521550 CASKIN1Q8WXD9 1431 aa20.82■□□□□ 0.92
SPIDR-214ENST00000521550 NUP153P49790 1475 aaKnown RBP20.8■□□□□ 0.92
SPIDR-214ENST00000521550 PCF11O94913 1555 aaKnown RBP20.8■□□□□ 0.92
SPIDR-214ENST00000521550 MAGI3Q5TCQ9 1506 aa20.8■□□□□ 0.92
SPIDR-214ENST00000521550 COL17A1Q9UMD9 1497 aaPredicted RBP20.8■□□□□ 0.92
SPIDR-214ENST00000521550 ATP1B4Q9UN42 357 aaPredicted RBP20.77■□□□□ 0.92
SPIDR-214ENST00000521550 ABCA9Q8IUA7 1624 aa20.74■□□□□ 0.91
SPIDR-214ENST00000521550 PLEKHD1A6NEE1 506 aa20.7■□□□□ 0.9
SPIDR-214ENST00000521550 KDM4FA0A1W2PPD8 638 aa20.67■□□□□ 0.9
SPIDR-214ENST00000521550 ZNF316A6NFI3 1004 aaPredicted RBP20.66■□□□□ 0.9
SPIDR-214ENST00000521550 DHX57Q6P158 1386 aaKnown RBP20.65■□□□□ 0.9
SPIDR-214ENST00000521550 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.64■□□□□ 0.89
SPIDR-214ENST00000521550 ARAP3Q8WWN8 1544 aa20.64■□□□□ 0.89
SPIDR-214ENST00000521550 DIEXFQ68CQ4 756 aaKnown RBP20.63■□□□□ 0.89
SPIDR-214ENST00000521550 CDK13Q14004 1512 aaKnown RBP20.63■□□□□ 0.89
SPIDR-214ENST00000521550 HECW1Q76N89 1606 aa20.63■□□□□ 0.89
SPIDR-214ENST00000521550 PHLDB1Q86UU1 1377 aa20.63■□□□□ 0.89
SPIDR-214ENST00000521550 MTUS2Q5JR59 1369 aa20.61■□□□□ 0.89
SPIDR-214ENST00000521550 ITGAEP38570 1179 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms