RNA–Protein interactions for RNA: ENST00000521122.1

PVT1-210, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 221 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-210ENST00000521122 SPATA31D1Q6ZQQ2 1576 aa17.32■□□□□ 0.36
PVT1-210ENST00000521122 NUP160Q12769 1436 aa17.32■□□□□ 0.36
PVT1-210ENST00000521122 FGD5Q6ZNL6 1462 aa17.31■□□□□ 0.36
PVT1-210ENST00000521122 CCDC88BA6NC98 1476 aa17.31■□□□□ 0.36
PVT1-210ENST00000521122 GRIN2AQ12879 1464 aa17.31■□□□□ 0.36
PVT1-210ENST00000521122 TOP2BQ02880 1626 aa17.3■□□□□ 0.36
PVT1-210ENST00000521122 PRG4Q92954 1404 aaPredicted RBP17.24■□□□□ 0.35
PVT1-210ENST00000521122 ADCY10Q96PN6 1610 aa17.24■□□□□ 0.35
PVT1-210ENST00000521122 COL17A1Q9UMD9 1497 aaPredicted RBP17.22■□□□□ 0.35
PVT1-210ENST00000521122 PPRC1Q5VV67 1664 aaKnown RBP17.22■□□□□ 0.35
PVT1-210ENST00000521122 CERKQ8TCT0 537 aa17.2■□□□□ 0.34
PVT1-210ENST00000521122 ABCA5Q8WWZ7 1642 aa17.14■□□□□ 0.33
PVT1-210ENST00000521122 ADAMTS12P58397 1594 aa17.11■□□□□ 0.33
PVT1-210ENST00000521122 JPH4Q96JJ6 628 aa17.11■□□□□ 0.33
PVT1-210ENST00000521122 GLI2P10070 1586 aa17.1■□□□□ 0.33
PVT1-210ENST00000521122 CUX1P39880 1505 aa17.09■□□□□ 0.33
PVT1-210ENST00000521122 PCF11O94913 1555 aaKnown RBP17.08■□□□□ 0.32
PVT1-210ENST00000521122 ABCA10Q8WWZ4 1543 aa17.06■□□□□ 0.32
PVT1-210ENST00000521122 PTPRMP28827 1452 aa17.03■□□□□ 0.32
PVT1-210ENST00000521122 FHAD1B1AJZ9 1412 aa17.03■□□□□ 0.32
PVT1-210ENST00000521122 TEX14Q8IWB6 1497 aa17■□□□□ 0.31
PVT1-210ENST00000521122 PLB1Q6P1J6 1458 aa16.99■□□□□ 0.31
PVT1-210ENST00000521122 ASXL2Q76L83 1435 aa16.97■□□□□ 0.31
PVT1-210ENST00000521122 MAP3K4Q9Y6R4 1608 aa16.95■□□□□ 0.3
PVT1-210ENST00000521122 KIF21BO75037 1637 aa16.94■□□□□ 0.3
PVT1-210ENST00000521122 ADAMTSL3P82987 1691 aa16.91■□□□□ 0.3
PVT1-210ENST00000521122 RUSC2Q8N2Y8 1516 aa16.91■□□□□ 0.3
PVT1-210ENST00000521122 ABCC2Q92887 1545 aa16.9■□□□□ 0.3
PVT1-210ENST00000521122 HSPA2P54652 639 aa16.87■□□□□ 0.29
PVT1-210ENST00000521122 EPRSP07814 1512 aaKnown RBP16.86■□□□□ 0.29
PVT1-210ENST00000521122 KIAA0586Q9BVV6 1533 aa16.86■□□□□ 0.29
PVT1-210ENST00000521122 ERICH3Q5RHP9 1530 aa16.82■□□□□ 0.28
PVT1-210ENST00000521122 PTPRGP23470 1445 aa16.79■□□□□ 0.28
PVT1-210ENST00000521122 CUL7Q14999 1698 aa16.78■□□□□ 0.28
PVT1-210ENST00000521122 MADDQ8WXG6 1647 aa16.74■□□□□ 0.27
PVT1-210ENST00000521122 BCORL1Q5H9F3 1711 aa16.72■□□□□ 0.27
PVT1-210ENST00000521122 UHRF1BP1LA0JNW5 1464 aa16.72■□□□□ 0.27
PVT1-210ENST00000521122 WRNQ14191 1432 aaPredicted RBP eCLIP16.71■□□□□ 0.27
PVT1-210ENST00000521122 MAGI3Q5TCQ9 1506 aa16.7■□□□□ 0.26
PVT1-210ENST00000521122 TTBK1Q5TCY1 1321 aaPredicted RBP16.67■□□□□ 0.26
PVT1-210ENST00000521122 KDM5BQ9UGL1 1544 aa16.65■□□□□ 0.26
PVT1-210ENST00000521122 TNIKQ9UKE5 1360 aa16.64■□□□□ 0.26
PVT1-210ENST00000521122 RIMS1Q86UR5 1692 aaKnown RBP16.64■□□□□ 0.25
PVT1-210ENST00000521122 DMRT2Q9Y5R5 561 aa16.63■□□□□ 0.25
PVT1-210ENST00000521122 CD109Q6YHK3 1445 aa16.62■□□□□ 0.25
PVT1-210ENST00000521122 UACAQ9BZF9 1416 aa16.62■□□□□ 0.25
PVT1-210ENST00000521122 IQSEC2Q5JU85 1478 aa16.62■□□□□ 0.25
PVT1-210ENST00000521122 YEATS2Q9ULM3 1422 aa16.61■□□□□ 0.25
PVT1-210ENST00000521122 ARAP3Q8WWN8 1544 aa16.6■□□□□ 0.25
PVT1-210ENST00000521122 CFAP43Q8NDM7 1665 aa16.59■□□□□ 0.25
PVT1-210ENST00000521122 MED1Q15648 1581 aaPredicted RBP16.59■□□□□ 0.25
PVT1-210ENST00000521122 ZCCHC11Q5TAX3 1644 aaKnown RBP16.59■□□□□ 0.25
PVT1-210ENST00000521122 ARID4BQ4LE39 1312 aaPredicted RBP16.58■□□□□ 0.24
PVT1-210ENST00000521122 WDR7Q9Y4E6 1490 aa16.58■□□□□ 0.24
PVT1-210ENST00000521122 CARMIL2Q6F5E8 1435 aa16.55■□□□□ 0.24
PVT1-210ENST00000521122 STRCQ7RTU9 1775 aa16.54■□□□□ 0.24
PVT1-210ENST00000521122 LTBP4Q8N2S1 1624 aa16.53■□□□□ 0.24
PVT1-210ENST00000521122 PLPPR3Q6T4P5 718 aa16.53■□□□□ 0.24
PVT1-210ENST00000521122 PTPRTO14522 1441 aa16.48■□□□□ 0.23
PVT1-210ENST00000521122 PREX1Q8TCU6 1659 aa16.45■□□□□ 0.22
PVT1-210ENST00000521122 BIVM-ERCC5R4GMW8 1640 aa16.45■□□□□ 0.22
PVT1-210ENST00000521122 PHLDB1Q86UU1 1377 aa16.43■□□□□ 0.22
PVT1-210ENST00000521122 UBAP1LF5GYI3 381 aa16.43■□□□□ 0.22
PVT1-210ENST00000521122 RAPGEF3O95398 923 aa16.43■□□□□ 0.22
PVT1-210ENST00000521122 PHF23Q9BUL5 403 aaPredicted RBP16.43■□□□□ 0.22
PVT1-210ENST00000521122 KCNH8Q96L42 1107 aa16.42■□□□□ 0.22
PVT1-210ENST00000521122 TTC37Q6PGP7 1564 aa16.38■□□□□ 0.21
PVT1-210ENST00000521122 POGZQ7Z3K3 1410 aa16.38■□□□□ 0.21
PVT1-210ENST00000521122 ARHGEF40Q8TER5 1519 aa16.37■□□□□ 0.21
PVT1-210ENST00000521122 DISP1Q96F81 1524 aa16.36■□□□□ 0.21
PVT1-210ENST00000521122 FRMPD1Q5SYB0 1578 aa16.36■□□□□ 0.21
PVT1-210ENST00000521122 HSPA1LP34931 641 aa16.34■□□□□ 0.21
PVT1-210ENST00000521122 FANCAO15360 1455 aa16.33■□□□□ 0.2
PVT1-210ENST00000521122 FER1L4A9Z1Z3 1794 aa16.33■□□□□ 0.2
PVT1-210ENST00000521122 IQGAP2Q13576 1575 aa16.31■□□□□ 0.2
PVT1-210ENST00000521122 UHRF1BP1Q6BDS2 1440 aa16.3■□□□□ 0.2
PVT1-210ENST00000521122 SRCAPQ6ZRS2 3230 aa16.3■□□□□ 0.2
PVT1-210ENST00000521122 NEO1Q92859 1461 aa16.29■□□□□ 0.2
PVT1-210ENST00000521122 IGF1RP08069 1367 aa16.27■□□□□ 0.2
PVT1-210ENST00000521122 SETD1BQ9UPS6 1966 aaKnown RBP16.26■□□□□ 0.19
PVT1-210ENST00000521122 SIGLEC1Q9BZZ2 1709 aa16.25■□□□□ 0.19
PVT1-210ENST00000521122 MLECQ14165 292 aa16.24■□□□□ 0.19
PVT1-210ENST00000521122 AKNAQ7Z591 1439 aa16.24■□□□□ 0.19
PVT1-210ENST00000521122 CEBPAP49715 358 aaPredicted RBP16.22■□□□□ 0.19
PVT1-210ENST00000521122 ABCA9Q8IUA7 1624 aa16.2■□□□□ 0.18
PVT1-210ENST00000521122 ZNF335Q9H4Z2 1342 aaPredicted RBP16.19■□□□□ 0.18
PVT1-210ENST00000521122 SCAF1Q9H7N4 1312 aaKnown RBP16.19■□□□□ 0.18
PVT1-210ENST00000521122 NCOA1Q15788 1441 aa16.19■□□□□ 0.18
PVT1-210ENST00000521122 ARHGEF12Q9NZN5 1544 aa16.19■□□□□ 0.18
PVT1-210ENST00000521122 KIAA0556O60303 1618 aa16.19■□□□□ 0.18
PVT1-210ENST00000521122 UGGT2Q9NYU1 1516 aa16.18■□□□□ 0.18
PVT1-210ENST00000521122 RGS17Q9UGC6 210 aaPredicted RBP16.17■□□□□ 0.18
PVT1-210ENST00000521122 RICTORQ6R327 1708 aa16.16■□□□□ 0.18
PVT1-210ENST00000521122 PIP4K2BP78356 416 aa16.16■□□□□ 0.18
PVT1-210ENST00000521122 FHOD3Q2V2M9 1422 aa16.16■□□□□ 0.18
PVT1-210ENST00000521122 DENND4BO75064 1496 aaPredicted RBP16.16■□□□□ 0.18
PVT1-210ENST00000521122 ZFYVE16Q7Z3T8 1539 aa16.14■□□□□ 0.17
PVT1-210ENST00000521122 ABCA8O94911 1581 aa16.13■□□□□ 0.17
PVT1-210ENST00000521122 EFCAB5A4FU69 1503 aa16.13■□□□□ 0.17
PVT1-210ENST00000521122 CARMIL1Q5VZK9 1371 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms