RNA–Protein interactions for RNA: ENST00000521047.1

CLINT1-203, Transcript of clathrin interactor 1, humanhuman

TSL 2

Gene CLINT1, Length 733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-203ENST00000521047 SYNJ2O15056 1496 aa13.91□□□□□ -0.18
CLINT1-203ENST00000521047 TRIM41Q8WV44 630 aa13.89□□□□□ -0.19
CLINT1-203ENST00000521047 ADAMTS12P58397 1594 aa13.88□□□□□ -0.19
CLINT1-203ENST00000521047 FBLN2P98095 1184 aa13.87□□□□□ -0.19
CLINT1-203ENST00000521047 ARAP1Q96P48 1450 aa13.87□□□□□ -0.19
CLINT1-203ENST00000521047 RNF216Q9NWF9 866 aaPredicted RBP13.84□□□□□ -0.19
CLINT1-203ENST00000521047 ERICH3Q5RHP9 1530 aa13.83□□□□□ -0.2
CLINT1-203ENST00000521047 CHMP7Q8WUX9 453 aaPredicted RBP13.82□□□□□ -0.2
CLINT1-203ENST00000521047 CEP170Q5SW79 1584 aa13.82□□□□□ -0.2
CLINT1-203ENST00000521047 GRIN2AQ12879 1464 aa13.81□□□□□ -0.2
CLINT1-203ENST00000521047 NUP160Q12769 1436 aa13.8□□□□□ -0.2
CLINT1-203ENST00000521047 HOXD11P31277 338 aaPredicted RBP13.79□□□□□ -0.2
CLINT1-203ENST00000521047 FHAD1B1AJZ9 1412 aa13.78□□□□□ -0.2
CLINT1-203ENST00000521047 ERCC6L2Q5T890 1561 aa13.78□□□□□ -0.2
CLINT1-203ENST00000521047 SHROOM2Q13796 1616 aa13.76□□□□□ -0.21
CLINT1-203ENST00000521047 CYB5RLQ6IPT4 315 aa13.73□□□□□ -0.21
CLINT1-203ENST00000521047 IGF1RP08069 1367 aa13.71□□□□□ -0.21
CLINT1-203ENST00000521047 RUSC2Q8N2Y8 1516 aa13.69□□□□□ -0.22
CLINT1-203ENST00000521047 CUL7Q14999 1698 aa13.67□□□□□ -0.22
CLINT1-203ENST00000521047 KIF27Q86VH2 1401 aa13.66□□□□□ -0.22
CLINT1-203ENST00000521047 PRG4Q92954 1404 aaPredicted RBP13.58□□□□□ -0.24
CLINT1-203ENST00000521047 SLC4A1APQ9BWU0 796 aaKnown RBP13.58□□□□□ -0.24
CLINT1-203ENST00000521047 KIAA0586Q9BVV6 1533 aa13.57□□□□□ -0.24
CLINT1-203ENST00000521047 CARMIL1Q5VZK9 1371 aa13.57□□□□□ -0.24
CLINT1-203ENST00000521047 JPH4Q96JJ6 628 aa13.56□□□□□ -0.24
CLINT1-203ENST00000521047 ADCY10Q96PN6 1610 aa13.49□□□□□ -0.25
CLINT1-203ENST00000521047 IQGAP2Q13576 1575 aa13.48□□□□□ -0.25
CLINT1-203ENST00000521047 RAPGEF2Q9Y4G8 1499 aa13.48□□□□□ -0.25
CLINT1-203ENST00000521047 KIF13AQ9H1H9 1805 aa13.46□□□□□ -0.25
CLINT1-203ENST00000521047 DISP1Q96F81 1524 aa13.46□□□□□ -0.25
CLINT1-203ENST00000521047 PRXQ9BXM0 1461 aa13.46□□□□□ -0.25
CLINT1-203ENST00000521047 TRHP20396 242 aaPredicted RBP13.44□□□□□ -0.26
CLINT1-203ENST00000521047 UGGT2Q9NYU1 1516 aa13.44□□□□□ -0.26
CLINT1-203ENST00000521047 CTTNBP2Q8WZ74 1663 aa13.43□□□□□ -0.26
CLINT1-203ENST00000521047 DCAF8L1A6NGE4 600 aa13.4□□□□□ -0.26
CLINT1-203ENST00000521047 MAPKBP1O60336 1514 aa13.39□□□□□ -0.27
CLINT1-203ENST00000521047 KIAA0556O60303 1618 aa13.39□□□□□ -0.27
CLINT1-203ENST00000521047 TNIKQ9UKE5 1360 aa13.36□□□□□ -0.27
CLINT1-203ENST00000521047 PTPRGP23470 1445 aa13.36□□□□□ -0.27
CLINT1-203ENST00000521047 DIP2BQ9P265 1576 aa13.36□□□□□ -0.27
CLINT1-203ENST00000521047 CARMIL2Q6F5E8 1435 aa13.34□□□□□ -0.27
CLINT1-203ENST00000521047 UHRF1BP1LA0JNW5 1464 aa13.34□□□□□ -0.27
CLINT1-203ENST00000521047 ABCC10Q5T3U5 1492 aa13.34□□□□□ -0.27
CLINT1-203ENST00000521047 ABCC2Q92887 1545 aa13.32□□□□□ -0.28
CLINT1-203ENST00000521047 CSRNP3Q8WYN3 585 aa13.3□□□□□ -0.28
CLINT1-203ENST00000521047 UACAQ9BZF9 1416 aa13.3□□□□□ -0.28
CLINT1-203ENST00000521047 KDM5BQ9UGL1 1544 aa13.29□□□□□ -0.28
CLINT1-203ENST00000521047 EEA1Q15075 1411 aa13.28□□□□□ -0.28
CLINT1-203ENST00000521047 ABCA8O94911 1581 aa13.28□□□□□ -0.28
CLINT1-203ENST00000521047 SAMD9Q5K651 1589 aa13.28□□□□□ -0.28
CLINT1-203ENST00000521047 ZCCHC11Q5TAX3 1644 aaKnown RBP13.28□□□□□ -0.28
CLINT1-203ENST00000521047 PLB1Q6P1J6 1458 aa13.27□□□□□ -0.29
CLINT1-203ENST00000521047 TTBK1Q5TCY1 1321 aaPredicted RBP13.26□□□□□ -0.29
CLINT1-203ENST00000521047 PPRC1Q5VV67 1664 aaKnown RBP13.26□□□□□ -0.29
CLINT1-203ENST00000521047 KIF21BO75037 1637 aa13.25□□□□□ -0.29
CLINT1-203ENST00000521047 EHMT2Q96KQ7 1210 aa13.25□□□□□ -0.29
CLINT1-203ENST00000521047 ASXL2Q76L83 1435 aa13.24□□□□□ -0.29
CLINT1-203ENST00000521047 GOLGA3Q08378 1498 aa13.23□□□□□ -0.29
CLINT1-203ENST00000521047 FAM69CQ0P6D2 419 aa13.23□□□□□ -0.29
CLINT1-203ENST00000521047 GLI2P10070 1586 aa13.23□□□□□ -0.29
CLINT1-203ENST00000521047 NPM1P06748 294 aaKnown RBP eCLIP13.22□□□□□ -0.29
CLINT1-203ENST00000521047 TSPOAP1O95153 1857 aa13.22□□□□□ -0.29
CLINT1-203ENST00000521047 SLC4A2P04920 1241 aa13.21□□□□□ -0.29
CLINT1-203ENST00000521047 FAM9AQ8IZU1 332 aaPredicted RBP13.2□□□□□ -0.3
CLINT1-203ENST00000521047 EPRSP07814 1512 aaKnown RBP13.19□□□□□ -0.3
CLINT1-203ENST00000521047 MAP3K4Q9Y6R4 1608 aa13.19□□□□□ -0.3
CLINT1-203ENST00000521047 ZBTB22O15209 634 aa13.16□□□□□ -0.3
CLINT1-203ENST00000521047 P3H3Q8IVL6 736 aa13.15□□□□□ -0.3
CLINT1-203ENST00000521047 ATP10BO94823 1461 aa13.14□□□□□ -0.31
CLINT1-203ENST00000521047 WDR7Q9Y4E6 1490 aa13.14□□□□□ -0.31
CLINT1-203ENST00000521047 RAPGEF6Q8TEU7 1601 aa13.13□□□□□ -0.31
CLINT1-203ENST00000521047 KDM6BO15054 1643 aa13.13□□□□□ -0.31
CLINT1-203ENST00000521047 FHOD3Q2V2M9 1422 aa13.13□□□□□ -0.31
CLINT1-203ENST00000521047 COL17A1Q9UMD9 1497 aaPredicted RBP13.12□□□□□ -0.31
CLINT1-203ENST00000521047 FOXD4L1Q9NU39 408 aa13.11□□□□□ -0.31
CLINT1-203ENST00000521047 NUP153P49790 1475 aaKnown RBP13.1□□□□□ -0.31
CLINT1-203ENST00000521047 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.1□□□□□ -0.31
CLINT1-203ENST00000521047 EFCAB5A4FU69 1503 aa13.09□□□□□ -0.31
CLINT1-203ENST00000521047 CFAP43Q8NDM7 1665 aa13.08□□□□□ -0.31
CLINT1-203ENST00000521047 ARHGAP35Q9NRY4 1499 aa13.07□□□□□ -0.32
CLINT1-203ENST00000521047 ABCA9Q8IUA7 1624 aa13.05□□□□□ -0.32
CLINT1-203ENST00000521047 MAGI3Q5TCQ9 1506 aa13.04□□□□□ -0.32
CLINT1-203ENST00000521047 ARID3CA6NKF2 412 aa13.04□□□□□ -0.32
CLINT1-203ENST00000521047 RANGAP1P46060 587 aaPredicted RBP13.04□□□□□ -0.32
CLINT1-203ENST00000521047 LRRIQ1Q96JM4 1722 aa13.03□□□□□ -0.32
CLINT1-203ENST00000521047 TEX14Q8IWB6 1497 aa13□□□□□ -0.33
CLINT1-203ENST00000521047 CD109Q6YHK3 1445 aa13□□□□□ -0.33
CLINT1-203ENST00000521047 CDK13Q14004 1512 aaKnown RBP12.99□□□□□ -0.33
CLINT1-203ENST00000521047 KCNH8Q96L42 1107 aa12.99□□□□□ -0.33
CLINT1-203ENST00000521047 UBTFP17480 764 aaKnown RBP12.97□□□□□ -0.33
CLINT1-203ENST00000521047 TTC37Q6PGP7 1564 aa12.95□□□□□ -0.34
CLINT1-203ENST00000521047 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.95□□□□□ -0.34
CLINT1-203ENST00000521047 KDM4FA0A1W2PPD8 638 aa12.95□□□□□ -0.34
CLINT1-203ENST00000521047 ARAP3Q8WWN8 1544 aa12.94□□□□□ -0.34
CLINT1-203ENST00000521047 U3KPZ7 1027 aaPredicted RBP12.94□□□□□ -0.34
CLINT1-203ENST00000521047 HECW1Q76N89 1606 aa12.94□□□□□ -0.34
CLINT1-203ENST00000521047 FRMPD1Q5SYB0 1578 aa12.94□□□□□ -0.34
CLINT1-203ENST00000521047 PCF11O94913 1555 aaKnown RBP12.92□□□□□ -0.34
CLINT1-203ENST00000521047 FMN1Q68DA7 1419 aa12.92□□□□□ -0.34
CLINT1-203ENST00000521047 MYCNP04198 464 aaPredicted RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms