RNA–Protein interactions for RNA: ENST00000520957.1

CLK4-208, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best) BASIC

Gene CLK4, Length 1,690 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-208ENST00000520957 ARHGEF11O15085 1522 aa20.48■□□□□ 0.87
CLK4-208ENST00000520957 KIAA0586Q9BVV6 1533 aa20.47■□□□□ 0.87
CLK4-208ENST00000520957 CYB5RLQ6IPT4 315 aa20.44■□□□□ 0.86
CLK4-208ENST00000520957 RIMBP3CA6NJZ7 1639 aa20.43■□□□□ 0.86
CLK4-208ENST00000520957 RIMBP3BA6NNM3 1639 aa20.43■□□□□ 0.86
CLK4-208ENST00000520957 RIMBP3Q9UFD9 1639 aa20.43■□□□□ 0.86
CLK4-208ENST00000520957 ERCC6L2Q5T890 1561 aa20.43■□□□□ 0.86
CLK4-208ENST00000520957 PRG4Q92954 1404 aaPredicted RBP20.42■□□□□ 0.86
CLK4-208ENST00000520957 SHROOM2Q13796 1616 aa20.36■□□□□ 0.85
CLK4-208ENST00000520957 ARAP1Q96P48 1450 aa20.36■□□□□ 0.85
CLK4-208ENST00000520957 UBTFP17480 764 aaKnown RBP20.35■□□□□ 0.85
CLK4-208ENST00000520957 RANGAP1P46060 587 aaPredicted RBP20.35■□□□□ 0.85
CLK4-208ENST00000520957 IQGAP2Q13576 1575 aa20.33■□□□□ 0.84
CLK4-208ENST00000520957 TTBK1Q5TCY1 1321 aaPredicted RBP20.33■□□□□ 0.84
CLK4-208ENST00000520957 KIF21BO75037 1637 aa20.31■□□□□ 0.84
CLK4-208ENST00000520957 GOLGA3Q08378 1498 aa20.27■□□□□ 0.84
CLK4-208ENST00000520957 P3H3Q8IVL6 736 aa20.27■□□□□ 0.84
CLK4-208ENST00000520957 DISP1Q96F81 1524 aa20.26■□□□□ 0.83
CLK4-208ENST00000520957 LOC105371045A0A1W2PR82 267 aa20.26■□□□□ 0.83
CLK4-208ENST00000520957 UGGT2Q9NYU1 1516 aa20.24■□□□□ 0.83
CLK4-208ENST00000520957 CARMIL2Q6F5E8 1435 aa20.23■□□□□ 0.83
CLK4-208ENST00000520957 CTTNBP2Q8WZ74 1663 aa20.21■□□□□ 0.83
CLK4-208ENST00000520957 PTPRGP23470 1445 aa20.2■□□□□ 0.82
CLK4-208ENST00000520957 TNIKQ9UKE5 1360 aa20.19■□□□□ 0.82
CLK4-208ENST00000520957 KIAA0556O60303 1618 aa20.13■□□□□ 0.81
CLK4-208ENST00000520957 FHOD3Q2V2M9 1422 aa20.08■□□□□ 0.8
CLK4-208ENST00000520957 SAMD9Q5K651 1589 aa20.05■□□□□ 0.8
CLK4-208ENST00000520957 PLB1Q6P1J6 1458 aa20.04■□□□□ 0.8
CLK4-208ENST00000520957 UACAQ9BZF9 1416 aa20.04■□□□□ 0.8
CLK4-208ENST00000520957 ARHGAP35Q9NRY4 1499 aa20.04■□□□□ 0.8
CLK4-208ENST00000520957 ARID3CA6NKF2 412 aa20.01■□□□□ 0.79
CLK4-208ENST00000520957 ADCY10Q96PN6 1610 aa20■□□□□ 0.79
CLK4-208ENST00000520957 NPM1P06748 294 aaKnown RBP eCLIP20■□□□□ 0.79
CLK4-208ENST00000520957 CLIP1P30622 1438 aa19.98■□□□□ 0.79
CLK4-208ENST00000520957 EFCAB5A4FU69 1503 aa19.97■□□□□ 0.79
CLK4-208ENST00000520957 UHRF1BP1LA0JNW5 1464 aa19.95■□□□□ 0.78
CLK4-208ENST00000520957 TRHP20396 242 aaPredicted RBP19.94■□□□□ 0.78
CLK4-208ENST00000520957 ABCC2Q92887 1545 aa19.94■□□□□ 0.78
CLK4-208ENST00000520957 ABCA8O94911 1581 aa19.93■□□□□ 0.78
CLK4-208ENST00000520957 CEP162Q5TB80 1403 aa19.93■□□□□ 0.78
CLK4-208ENST00000520957 ATP1B4Q9UN42 357 aaPredicted RBP19.91■□□□□ 0.78
CLK4-208ENST00000520957 KDM5BQ9UGL1 1544 aa19.88■□□□□ 0.77
CLK4-208ENST00000520957 FMN1Q68DA7 1419 aa19.85■□□□□ 0.77
CLK4-208ENST00000520957 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.85■□□□□ 0.77
CLK4-208ENST00000520957 HNRNPUL2Q1KMD3 747 aaKnown RBP19.85■□□□□ 0.77
CLK4-208ENST00000520957 ATP10BO94823 1461 aa19.85■□□□□ 0.77
CLK4-208ENST00000520957 NUP153P49790 1475 aaKnown RBP19.84■□□□□ 0.77
CLK4-208ENST00000520957 ASXL2Q76L83 1435 aa19.83■□□□□ 0.77
CLK4-208ENST00000520957 RAPGEF6Q8TEU7 1601 aa19.82■□□□□ 0.76
CLK4-208ENST00000520957 FAM69CQ0P6D2 419 aa19.81■□□□□ 0.76
CLK4-208ENST00000520957 MAPKBP1O60336 1514 aa19.8■□□□□ 0.76
CLK4-208ENST00000520957 KCNH8Q96L42 1107 aa19.8■□□□□ 0.76
CLK4-208ENST00000520957 ZCCHC11Q5TAX3 1644 aaKnown RBP19.79■□□□□ 0.76
CLK4-208ENST00000520957 ABCC10Q5T3U5 1492 aa19.75■□□□□ 0.75
CLK4-208ENST00000520957 CASKIN1Q8WXD9 1431 aa19.74■□□□□ 0.75
CLK4-208ENST00000520957 CDK13Q14004 1512 aaKnown RBP19.74■□□□□ 0.75
CLK4-208ENST00000520957 PLEKHD1A6NEE1 506 aa19.72■□□□□ 0.75
CLK4-208ENST00000520957 EPRSP07814 1512 aaKnown RBP19.72■□□□□ 0.75
CLK4-208ENST00000520957 WDR7Q9Y4E6 1490 aa19.71■□□□□ 0.75
CLK4-208ENST00000520957 PCF11O94913 1555 aaKnown RBP19.71■□□□□ 0.75
CLK4-208ENST00000520957 DIP2BQ9P265 1576 aa19.67■□□□□ 0.74
CLK4-208ENST00000520957 HECW1Q76N89 1606 aa19.66■□□□□ 0.74
CLK4-208ENST00000520957 FYCO1Q9BQS8 1478 aa19.65■□□□□ 0.74
CLK4-208ENST00000520957 VPS8Q8N3P4 1428 aa19.65■□□□□ 0.74
CLK4-208ENST00000520957 CDK11AQ9UQ88 783 aaPredicted RBP19.62■□□□□ 0.73
CLK4-208ENST00000520957 KIF13AQ9H1H9 1805 aa19.62■□□□□ 0.73
CLK4-208ENST00000520957 LRRIQ1Q96JM4 1722 aa19.61■□□□□ 0.73
CLK4-208ENST00000520957 GLI2P10070 1586 aa19.58■□□□□ 0.73
CLK4-208ENST00000520957 CCDC18Q5T9S5 1454 aa19.57■□□□□ 0.72
CLK4-208ENST00000520957 AEBP2Q6ZN18 517 aaPredicted RBP19.57■□□□□ 0.72
CLK4-208ENST00000520957 CD109Q6YHK3 1445 aa19.57■□□□□ 0.72
CLK4-208ENST00000520957 MAGI3Q5TCQ9 1506 aa19.56■□□□□ 0.72
CLK4-208ENST00000520957 TROQ12816 1431 aaPredicted RBP19.55■□□□□ 0.72
CLK4-208ENST00000520957 KANK4Q5T7N3 995 aaPredicted RBP19.53■□□□□ 0.72
CLK4-208ENST00000520957 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.5■□□□□ 0.71
CLK4-208ENST00000520957 TSPOAP1O95153 1857 aa19.5■□□□□ 0.71
CLK4-208ENST00000520957 MTUS2Q5JR59 1369 aa19.5■□□□□ 0.71
CLK4-208ENST00000520957 MAP3K4Q9Y6R4 1608 aa19.49■□□□□ 0.71
CLK4-208ENST00000520957 KIF14Q15058 1648 aa19.47■□□□□ 0.71
CLK4-208ENST00000520957 ABCA9Q8IUA7 1624 aa19.46■□□□□ 0.71
CLK4-208ENST00000520957 PPRC1Q5VV67 1664 aaKnown RBP19.46■□□□□ 0.71
CLK4-208ENST00000520957 APLP2Q06481 763 aa19.46■□□□□ 0.71
CLK4-208ENST00000520957 TTC37Q6PGP7 1564 aa19.45■□□□□ 0.7
CLK4-208ENST00000520957 TIAM1Q13009 1591 aa19.44■□□□□ 0.7
CLK4-208ENST00000520957 COL17A1Q9UMD9 1497 aaPredicted RBP19.43■□□□□ 0.7
CLK4-208ENST00000520957 CFAP43Q8NDM7 1665 aa19.42■□□□□ 0.7
CLK4-208ENST00000520957 PLCH2O75038 1416 aa19.41■□□□□ 0.7
CLK4-208ENST00000520957 LRRC9Q6ZRR7 1453 aa19.4■□□□□ 0.7
CLK4-208ENST00000520957 PPARGC1BQ86YN6 1023 aaKnown RBP19.4■□□□□ 0.7
CLK4-208ENST00000520957 TEX14Q8IWB6 1497 aa19.4■□□□□ 0.7
CLK4-208ENST00000520957 MAP3K1Q13233 1512 aa19.38■□□□□ 0.69
CLK4-208ENST00000520957 EFCAB2Q5VUJ9 269 aa19.37■□□□□ 0.69
CLK4-208ENST00000520957 RAPGEF3O95398 923 aa19.36■□□□□ 0.69
CLK4-208ENST00000520957 FANCAO15360 1455 aa19.36■□□□□ 0.69
CLK4-208ENST00000520957 CCNB3Q8WWL7 1395 aa19.35■□□□□ 0.69
CLK4-208ENST00000520957 EHBP1L1Q8N3D4 1523 aa19.35■□□□□ 0.69
CLK4-208ENST00000520957 GPATCH8Q9UKJ3 1502 aaKnown RBP19.35■□□□□ 0.69
CLK4-208ENST00000520957 ZNF777Q9ULD5 760 aaPredicted RBP19.35■□□□□ 0.69
CLK4-208ENST00000520957 AKNAQ7Z591 1439 aa19.34■□□□□ 0.69
CLK4-208ENST00000520957 NCOA2Q15596 1464 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms