RNA–Protein interactions for RNA: ENST00000520851.1

PDGFRB-208, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 2

Gene PDGFRB, Length 406 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-208ENST00000520851 CARMIL1Q5VZK9 1371 aa13.87□□□□□ -0.19
PDGFRB-208ENST00000520851 CHMP7Q8WUX9 453 aaPredicted RBP13.87□□□□□ -0.19
PDGFRB-208ENST00000520851 CSRNP3Q8WYN3 585 aa13.87□□□□□ -0.19
PDGFRB-208ENST00000520851 GRIN2AQ12879 1464 aa13.87□□□□□ -0.19
PDGFRB-208ENST00000520851 RAPGEF2Q9Y4G8 1499 aa13.87□□□□□ -0.19
PDGFRB-208ENST00000520851 PRXQ9BXM0 1461 aa13.84□□□□□ -0.19
PDGFRB-208ENST00000520851 FBLN2P98095 1184 aa13.83□□□□□ -0.2
PDGFRB-208ENST00000520851 OSCARQ8IYS5 282 aa13.8□□□□□ -0.2
PDGFRB-208ENST00000520851 FAM9AQ8IZU1 332 aaPredicted RBP13.8□□□□□ -0.2
PDGFRB-208ENST00000520851 CEP170Q5SW79 1584 aa13.79□□□□□ -0.2
PDGFRB-208ENST00000520851 MAPK8IP2Q13387 824 aaPredicted RBP13.78□□□□□ -0.2
PDGFRB-208ENST00000520851 NUP160Q12769 1436 aa13.78□□□□□ -0.2
PDGFRB-208ENST00000520851 CNKSR2Q8WXI2 1034 aa13.76□□□□□ -0.21
PDGFRB-208ENST00000520851 CLASP1Q7Z460 1538 aa13.75□□□□□ -0.21
PDGFRB-208ENST00000520851 GOLGA3Q08378 1498 aa13.75□□□□□ -0.21
PDGFRB-208ENST00000520851 IQGAP2Q13576 1575 aa13.75□□□□□ -0.21
PDGFRB-208ENST00000520851 KIAA0586Q9BVV6 1533 aa13.74□□□□□ -0.21
PDGFRB-208ENST00000520851 SHROOM2Q13796 1616 aa13.73□□□□□ -0.21
PDGFRB-208ENST00000520851 NPM3O75607 178 aaKnown RBP13.69□□□□□ -0.22
PDGFRB-208ENST00000520851 UBTFP17480 764 aaKnown RBP13.65□□□□□ -0.22
PDGFRB-208ENST00000520851 UGGT2Q9NYU1 1516 aa13.64□□□□□ -0.23
PDGFRB-208ENST00000520851 EFCAB5A4FU69 1503 aa13.61□□□□□ -0.23
PDGFRB-208ENST00000520851 JPH4Q96JJ6 628 aa13.61□□□□□ -0.23
PDGFRB-208ENST00000520851 CARMIL2Q6F5E8 1435 aa13.61□□□□□ -0.23
PDGFRB-208ENST00000520851 TNIKQ9UKE5 1360 aa13.6□□□□□ -0.23
PDGFRB-208ENST00000520851 RIMBP3CA6NJZ7 1639 aa13.6□□□□□ -0.23
PDGFRB-208ENST00000520851 RIMBP3BA6NNM3 1639 aa13.6□□□□□ -0.23
PDGFRB-208ENST00000520851 RIMBP3Q9UFD9 1639 aa13.6□□□□□ -0.23
PDGFRB-208ENST00000520851 SAMD9Q5K651 1589 aa13.59□□□□□ -0.23
PDGFRB-208ENST00000520851 KIAA0556O60303 1618 aa13.59□□□□□ -0.23
PDGFRB-208ENST00000520851 ARHGEF11O15085 1522 aa13.58□□□□□ -0.24
PDGFRB-208ENST00000520851 PRG4Q92954 1404 aaPredicted RBP13.57□□□□□ -0.24
PDGFRB-208ENST00000520851 DNAJC5Q9H3Z4 198 aa13.56□□□□□ -0.24
PDGFRB-208ENST00000520851 EHMT2Q96KQ7 1210 aa13.55□□□□□ -0.24
PDGFRB-208ENST00000520851 DISP1Q96F81 1524 aa13.54□□□□□ -0.24
PDGFRB-208ENST00000520851 DMRT2Q9Y5R5 561 aa13.53□□□□□ -0.24
PDGFRB-208ENST00000520851 ERCC6L2Q5T890 1561 aa13.52□□□□□ -0.25
PDGFRB-208ENST00000520851 LOC105371045A0A1W2PR82 267 aa13.5□□□□□ -0.25
PDGFRB-208ENST00000520851 SLC4A1APQ9BWU0 796 aaKnown RBP13.48□□□□□ -0.25
PDGFRB-208ENST00000520851 CLIP1P30622 1438 aa13.47□□□□□ -0.25
PDGFRB-208ENST00000520851 CEP162Q5TB80 1403 aa13.47□□□□□ -0.25
PDGFRB-208ENST00000520851 ARHGAP35Q9NRY4 1499 aa13.47□□□□□ -0.25
PDGFRB-208ENST00000520851 ARAP1Q96P48 1450 aa13.45□□□□□ -0.26
PDGFRB-208ENST00000520851 RANGAP1P46060 587 aaPredicted RBP13.45□□□□□ -0.26
PDGFRB-208ENST00000520851 PTPRGP23470 1445 aa13.45□□□□□ -0.26
PDGFRB-208ENST00000520851 RAPGEF6Q8TEU7 1601 aa13.44□□□□□ -0.26
PDGFRB-208ENST00000520851 FMN1Q68DA7 1419 aa13.44□□□□□ -0.26
PDGFRB-208ENST00000520851 RNF216Q9NWF9 866 aaPredicted RBP13.43□□□□□ -0.26
PDGFRB-208ENST00000520851 FHOD3Q2V2M9 1422 aa13.41□□□□□ -0.26
PDGFRB-208ENST00000520851 ABCA8O94911 1581 aa13.41□□□□□ -0.26
PDGFRB-208ENST00000520851 HECW1Q76N89 1606 aa13.4□□□□□ -0.26
PDGFRB-208ENST00000520851 P3H3Q8IVL6 736 aa13.4□□□□□ -0.26
PDGFRB-208ENST00000520851 UHRF1BP1LA0JNW5 1464 aa13.4□□□□□ -0.26
PDGFRB-208ENST00000520851 ABCC2Q92887 1545 aa13.39□□□□□ -0.27
PDGFRB-208ENST00000520851 ADCY10Q96PN6 1610 aa13.39□□□□□ -0.27
PDGFRB-208ENST00000520851 UACAQ9BZF9 1416 aa13.39□□□□□ -0.27
PDGFRB-208ENST00000520851 CYB5RLQ6IPT4 315 aa13.37□□□□□ -0.27
PDGFRB-208ENST00000520851 LRRIQ1Q96JM4 1722 aa13.36□□□□□ -0.27
PDGFRB-208ENST00000520851 ZCCHC11Q5TAX3 1644 aaKnown RBP13.35□□□□□ -0.27
PDGFRB-208ENST00000520851 PCF11O94913 1555 aaKnown RBP13.35□□□□□ -0.27
PDGFRB-208ENST00000520851 TTBK1Q5TCY1 1321 aaPredicted RBP13.35□□□□□ -0.27
PDGFRB-208ENST00000520851 PLB1Q6P1J6 1458 aa13.35□□□□□ -0.27
PDGFRB-208ENST00000520851 FYCO1Q9BQS8 1478 aa13.35□□□□□ -0.27
PDGFRB-208ENST00000520851 VPS8Q8N3P4 1428 aa13.32□□□□□ -0.28
PDGFRB-208ENST00000520851 CASKIN1Q8WXD9 1431 aa13.32□□□□□ -0.28
PDGFRB-208ENST00000520851 NPM1P06748 294 aaKnown RBP eCLIP13.32□□□□□ -0.28
PDGFRB-208ENST00000520851 HOXD11P31277 338 aaPredicted RBP13.32□□□□□ -0.28
PDGFRB-208ENST00000520851 KDM5BQ9UGL1 1544 aa13.32□□□□□ -0.28
PDGFRB-208ENST00000520851 CCDC18Q5T9S5 1454 aa13.31□□□□□ -0.28
PDGFRB-208ENST00000520851 CFAP43Q8NDM7 1665 aa13.29□□□□□ -0.28
PDGFRB-208ENST00000520851 NUP153P49790 1475 aaKnown RBP13.29□□□□□ -0.28
PDGFRB-208ENST00000520851 MAPKBP1O60336 1514 aa13.29□□□□□ -0.28
PDGFRB-208ENST00000520851 EPRSP07814 1512 aaKnown RBP13.27□□□□□ -0.29
PDGFRB-208ENST00000520851 MAP3K1Q13233 1512 aa13.25□□□□□ -0.29
PDGFRB-208ENST00000520851 ATP10BO94823 1461 aa13.24□□□□□ -0.29
PDGFRB-208ENST00000520851 ATP1B4Q9UN42 357 aaPredicted RBP13.24□□□□□ -0.29
PDGFRB-208ENST00000520851 CDK11AQ9UQ88 783 aaPredicted RBP13.24□□□□□ -0.29
PDGFRB-208ENST00000520851 KIF13AQ9H1H9 1805 aa13.23□□□□□ -0.29
PDGFRB-208ENST00000520851 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.22□□□□□ -0.29
PDGFRB-208ENST00000520851 APLP2Q06481 763 aa13.22□□□□□ -0.29
PDGFRB-208ENST00000520851 HNRNPUL2Q1KMD3 747 aaKnown RBP13.22□□□□□ -0.29
PDGFRB-208ENST00000520851 TIAM1Q13009 1591 aa13.22□□□□□ -0.29
PDGFRB-208ENST00000520851 CDK13Q14004 1512 aaKnown RBP13.21□□□□□ -0.29
PDGFRB-208ENST00000520851 WDR7Q9Y4E6 1490 aa13.2□□□□□ -0.3
PDGFRB-208ENST00000520851 PLEKHD1A6NEE1 506 aa13.19□□□□□ -0.3
PDGFRB-208ENST00000520851 ASXL2Q76L83 1435 aa13.19□□□□□ -0.3
PDGFRB-208ENST00000520851 SUPT6HQ7KZ85 1726 aaKnown RBP13.19□□□□□ -0.3
PDGFRB-208ENST00000520851 KIF14Q15058 1648 aa13.18□□□□□ -0.3
PDGFRB-208ENST00000520851 GLI2P10070 1586 aa13.17□□□□□ -0.3
PDGFRB-208ENST00000520851 EHBP1L1Q8N3D4 1523 aa13.17□□□□□ -0.3
PDGFRB-208ENST00000520851 MYO5CQ9NQX4 1742 aa13.16□□□□□ -0.3
PDGFRB-208ENST00000520851 DIP2BQ9P265 1576 aa13.16□□□□□ -0.3
PDGFRB-208ENST00000520851 ABCA9Q8IUA7 1624 aa13.15□□□□□ -0.3
PDGFRB-208ENST00000520851 ITSN2Q9NZM3 1697 aa13.15□□□□□ -0.31
PDGFRB-208ENST00000520851 TROQ12816 1431 aaPredicted RBP13.14□□□□□ -0.31
PDGFRB-208ENST00000520851 ARID3CA6NKF2 412 aa13.14□□□□□ -0.31
PDGFRB-208ENST00000520851 ABCC10Q5T3U5 1492 aa13.14□□□□□ -0.31
PDGFRB-208ENST00000520851 TSPOAP1O95153 1857 aa13.14□□□□□ -0.31
PDGFRB-208ENST00000520851 MAP3K4Q9Y6R4 1608 aa13.13□□□□□ -0.31
PDGFRB-208ENST00000520851 MTUS2Q5JR59 1369 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms