RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 IGF1RP08069 1367 aa26.47■■□□□ 1.83
CSMD1-207ENST00000520451 CUL7Q14999 1698 aa26.41■■□□□ 1.82
CSMD1-207ENST00000520451 KIAA0586Q9BVV6 1533 aa26.36■■□□□ 1.81
CSMD1-207ENST00000520451 CARMIL1Q5VZK9 1371 aa26.31■■□□□ 1.8
CSMD1-207ENST00000520451 NPM1P06748 294 aaKnown RBP eCLIP26.23■■□□□ 1.79
CSMD1-207ENST00000520451 ADCY10Q96PN6 1610 aa26.21■■□□□ 1.79
CSMD1-207ENST00000520451 KIF13AQ9H1H9 1805 aa26.19■■□□□ 1.78
CSMD1-207ENST00000520451 MAPKBP1O60336 1514 aa26.16■■□□□ 1.78
CSMD1-207ENST00000520451 ABCC10Q5T3U5 1492 aa26.13■■□□□ 1.77
CSMD1-207ENST00000520451 FAM69CQ0P6D2 419 aa26.13■■□□□ 1.77
CSMD1-207ENST00000520451 PTPRGP23470 1445 aa26.13■■□□□ 1.77
CSMD1-207ENST00000520451 IQGAP2Q13576 1575 aa26.12■■□□□ 1.77
CSMD1-207ENST00000520451 CARMIL2Q6F5E8 1435 aa26.12■■□□□ 1.77
CSMD1-207ENST00000520451 TTBK1Q5TCY1 1321 aaPredicted RBP26.1■■□□□ 1.77
CSMD1-207ENST00000520451 TNIKQ9UKE5 1360 aa26.08■■□□□ 1.77
CSMD1-207ENST00000520451 RAPGEF2Q9Y4G8 1499 aa26.07■■□□□ 1.76
CSMD1-207ENST00000520451 DIP2BQ9P265 1576 aa26.07■■□□□ 1.76
CSMD1-207ENST00000520451 AEBP2Q6ZN18 517 aaPredicted RBP26.04■■□□□ 1.76
CSMD1-207ENST00000520451 DISP1Q96F81 1524 aa25.99■■□□□ 1.75
CSMD1-207ENST00000520451 ABCC2Q92887 1545 aa25.97■■□□□ 1.75
CSMD1-207ENST00000520451 UGGT2Q9NYU1 1516 aa25.95■■□□□ 1.74
CSMD1-207ENST00000520451 UACAQ9BZF9 1416 aa25.92■■□□□ 1.74
CSMD1-207ENST00000520451 UHRF1BP1LA0JNW5 1464 aa25.91■■□□□ 1.74
CSMD1-207ENST00000520451 ASXL2Q76L83 1435 aa25.88■■□□□ 1.73
CSMD1-207ENST00000520451 KIAA0556O60303 1618 aa25.88■■□□□ 1.73
CSMD1-207ENST00000520451 PLB1Q6P1J6 1458 aa25.86■■□□□ 1.73
CSMD1-207ENST00000520451 TSPOAP1O95153 1857 aa25.86■■□□□ 1.73
CSMD1-207ENST00000520451 KDM6BO15054 1643 aa25.83■■□□□ 1.73
CSMD1-207ENST00000520451 CTTNBP2Q8WZ74 1663 aa25.83■■□□□ 1.73
CSMD1-207ENST00000520451 PRXQ9BXM0 1461 aa25.81■■□□□ 1.72
CSMD1-207ENST00000520451 KDM5BQ9UGL1 1544 aa25.8■■□□□ 1.72
CSMD1-207ENST00000520451 GLI2P10070 1586 aa25.78■■□□□ 1.72
CSMD1-207ENST00000520451 GOLGA3Q08378 1498 aa25.76■■□□□ 1.71
CSMD1-207ENST00000520451 ZCCHC11Q5TAX3 1644 aaKnown RBP25.75■■□□□ 1.71
CSMD1-207ENST00000520451 EPRSP07814 1512 aaKnown RBP25.72■■□□□ 1.71
CSMD1-207ENST00000520451 PPRC1Q5VV67 1664 aaKnown RBP25.7■■□□□ 1.7
CSMD1-207ENST00000520451 WDR7Q9Y4E6 1490 aa25.64■■□□□ 1.69
CSMD1-207ENST00000520451 ABCA8O94911 1581 aa25.64■■□□□ 1.69
CSMD1-207ENST00000520451 MAP3K4Q9Y6R4 1608 aa25.63■■□□□ 1.69
CSMD1-207ENST00000520451 CSRNP3Q8WYN3 585 aa25.63■■□□□ 1.69
CSMD1-207ENST00000520451 TEX14Q8IWB6 1497 aa25.59■■□□□ 1.69
CSMD1-207ENST00000520451 P3H3Q8IVL6 736 aa25.56■■□□□ 1.68
CSMD1-207ENST00000520451 KDM4FA0A1W2PPD8 638 aa25.54■■□□□ 1.68
CSMD1-207ENST00000520451 EEA1Q15075 1411 aa25.54■■□□□ 1.68
CSMD1-207ENST00000520451 COL17A1Q9UMD9 1497 aaPredicted RBP25.53■■□□□ 1.68
CSMD1-207ENST00000520451 FAM9AQ8IZU1 332 aaPredicted RBP25.53■■□□□ 1.68
CSMD1-207ENST00000520451 KCNH8Q96L42 1107 aa25.52■■□□□ 1.68
CSMD1-207ENST00000520451 SAMD9Q5K651 1589 aa25.48■■□□□ 1.67
CSMD1-207ENST00000520451 CD109Q6YHK3 1445 aa25.48■■□□□ 1.67
CSMD1-207ENST00000520451 ARID3CA6NKF2 412 aa25.48■■□□□ 1.67
CSMD1-207ENST00000520451 CFAP43Q8NDM7 1665 aa25.45■■□□□ 1.67
CSMD1-207ENST00000520451 MAGI3Q5TCQ9 1506 aa25.44■■□□□ 1.66
CSMD1-207ENST00000520451 ATP10BO94823 1461 aa25.43■■□□□ 1.66
CSMD1-207ENST00000520451 RANGAP1P46060 587 aaPredicted RBP25.41■■□□□ 1.66
CSMD1-207ENST00000520451 RAPGEF6Q8TEU7 1601 aa25.38■■□□□ 1.65
CSMD1-207ENST00000520451 ADGRL1O94910 1474 aa25.38■■□□□ 1.65
CSMD1-207ENST00000520451 FHOD3Q2V2M9 1422 aa25.34■■□□□ 1.65
CSMD1-207ENST00000520451 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.32■■□□□ 1.64
CSMD1-207ENST00000520451 HNRNPUL2Q1KMD3 747 aaKnown RBP25.32■■□□□ 1.64
CSMD1-207ENST00000520451 KIF21BO75037 1637 aa25.32■■□□□ 1.64
CSMD1-207ENST00000520451 NUP153P49790 1475 aaKnown RBP25.29■■□□□ 1.64
CSMD1-207ENST00000520451 ABCA9Q8IUA7 1624 aa25.28■■□□□ 1.64
CSMD1-207ENST00000520451 EFCAB5A4FU69 1503 aa25.25■■□□□ 1.63
CSMD1-207ENST00000520451 ARAP3Q8WWN8 1544 aa25.23■■□□□ 1.63
CSMD1-207ENST00000520451 CHIC1Q5VXU3 224 aa25.2■■□□□ 1.62
CSMD1-207ENST00000520451 EHMT2Q96KQ7 1210 aa25.2■■□□□ 1.62
CSMD1-207ENST00000520451 PHLDB1Q86UU1 1377 aa25.19■■□□□ 1.62
CSMD1-207ENST00000520451 UBTFP17480 764 aaKnown RBP25.16■■□□□ 1.62
CSMD1-207ENST00000520451 NEO1Q92859 1461 aa25.15■■□□□ 1.62
CSMD1-207ENST00000520451 PLEKHD1A6NEE1 506 aa25.15■■□□□ 1.62
CSMD1-207ENST00000520451 RAPGEF3O95398 923 aa25.11■■□□□ 1.61
CSMD1-207ENST00000520451 CDK13Q14004 1512 aaKnown RBP25.07■■□□□ 1.6
CSMD1-207ENST00000520451 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.05■■□□□ 1.6
CSMD1-207ENST00000520451 FRMPD1Q5SYB0 1578 aa25.04■■□□□ 1.6
CSMD1-207ENST00000520451 ARHGAP35Q9NRY4 1499 aa25.03■■□□□ 1.6
CSMD1-207ENST00000520451 FMN1Q68DA7 1419 aa25.03■■□□□ 1.6
CSMD1-207ENST00000520451 TTC37Q6PGP7 1564 aa25.01■■□□□ 1.59
CSMD1-207ENST00000520451 ATP1B4Q9UN42 357 aaPredicted RBP25.01■■□□□ 1.59
CSMD1-207ENST00000520451 FANCAO15360 1455 aa25.01■■□□□ 1.59
CSMD1-207ENST00000520451 AKNAQ7Z591 1439 aa25■■□□□ 1.59
CSMD1-207ENST00000520451 HECW2Q9P2P5 1572 aa25■■□□□ 1.59
CSMD1-207ENST00000520451 DENND4BO75064 1496 aaPredicted RBP24.99■■□□□ 1.59
CSMD1-207ENST00000520451 HECW1Q76N89 1606 aa24.99■■□□□ 1.59
CSMD1-207ENST00000520451 CFAP74Q9C0B2 1584 aa24.99■■□□□ 1.59
CSMD1-207ENST00000520451 RICTORQ6R327 1708 aa24.93■■□□□ 1.58
CSMD1-207ENST00000520451 ARHGEF40Q8TER5 1519 aa24.92■■□□□ 1.58
CSMD1-207ENST00000520451 ARID4BQ4LE39 1312 aaPredicted RBP24.92■■□□□ 1.58
CSMD1-207ENST00000520451 ADAMTSL3P82987 1691 aa24.91■■□□□ 1.58
CSMD1-207ENST00000520451 CDK11AQ9UQ88 783 aaPredicted RBP24.9■■□□□ 1.58
CSMD1-207ENST00000520451 PLCH2O75038 1416 aa24.89■■□□□ 1.58
CSMD1-207ENST00000520451 BCORL1Q5H9F3 1711 aa24.87■■□□□ 1.57
CSMD1-207ENST00000520451 PTPRMP28827 1452 aa24.87■■□□□ 1.57
CSMD1-207ENST00000520451 ZMYM4Q5VZL5 1548 aa24.86■■□□□ 1.57
CSMD1-207ENST00000520451 SCAPERQ9BY12 1400 aa24.84■■□□□ 1.57
CSMD1-207ENST00000520451 ZFYVE16Q7Z3T8 1539 aa24.83■■□□□ 1.57
CSMD1-207ENST00000520451 TROQ12816 1431 aaPredicted RBP24.83■■□□□ 1.57
CSMD1-207ENST00000520451 KIF14Q15058 1648 aa24.83■■□□□ 1.56
CSMD1-207ENST00000520451 MADDQ8WXG6 1647 aa24.83■■□□□ 1.56
CSMD1-207ENST00000520451 POGZQ7Z3K3 1410 aa24.82■■□□□ 1.56
CSMD1-207ENST00000520451 MYO5CQ9NQX4 1742 aa24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms