RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 JPH4Q96JJ6 628 aa27.79■■■□□ 2.04
IGHV3-42-201ENST00000520410 IGF1RP08069 1367 aa27.78■■■□□ 2.04
IGHV3-42-201ENST00000520410 CARMIL1Q5VZK9 1371 aa27.68■■■□□ 2.02
IGHV3-42-201ENST00000520410 KIAA0586Q9BVV6 1533 aa27.66■■■□□ 2.02
IGHV3-42-201ENST00000520410 TTBK1Q5TCY1 1321 aaPredicted RBP27.62■■■□□ 2.01
IGHV3-42-201ENST00000520410 NPM1P06748 294 aaKnown RBP eCLIP27.57■■■□□ 2
IGHV3-42-201ENST00000520410 IQGAP2Q13576 1575 aa27.48■■□□□ 1.99
IGHV3-42-201ENST00000520410 CARMIL2Q6F5E8 1435 aa27.47■■□□□ 1.99
IGHV3-42-201ENST00000520410 RAPGEF2Q9Y4G8 1499 aa27.46■■□□□ 1.99
IGHV3-42-201ENST00000520410 ADCY10Q96PN6 1610 aa27.44■■□□□ 1.98
IGHV3-42-201ENST00000520410 PTPRGP23470 1445 aa27.41■■□□□ 1.98
IGHV3-42-201ENST00000520410 TNIKQ9UKE5 1360 aa27.37■■□□□ 1.97
IGHV3-42-201ENST00000520410 FAM69CQ0P6D2 419 aa27.36■■□□□ 1.97
IGHV3-42-201ENST00000520410 KIF13AQ9H1H9 1805 aa27.36■■□□□ 1.97
IGHV3-42-201ENST00000520410 MAPKBP1O60336 1514 aa27.33■■□□□ 1.97
IGHV3-42-201ENST00000520410 ABCC10Q5T3U5 1492 aa27.29■■□□□ 1.96
IGHV3-42-201ENST00000520410 DISP1Q96F81 1524 aa27.26■■□□□ 1.96
IGHV3-42-201ENST00000520410 CTTNBP2Q8WZ74 1663 aa27.26■■□□□ 1.95
IGHV3-42-201ENST00000520410 DIP2BQ9P265 1576 aa27.26■■□□□ 1.95
IGHV3-42-201ENST00000520410 UGGT2Q9NYU1 1516 aa27.24■■□□□ 1.95
IGHV3-42-201ENST00000520410 KIAA0556O60303 1618 aa27.23■■□□□ 1.95
IGHV3-42-201ENST00000520410 ABCC2Q92887 1545 aa27.21■■□□□ 1.95
IGHV3-42-201ENST00000520410 UACAQ9BZF9 1416 aa27.2■■□□□ 1.94
IGHV3-42-201ENST00000520410 AEBP2Q6ZN18 517 aaPredicted RBP27.18■■□□□ 1.94
IGHV3-42-201ENST00000520410 PRXQ9BXM0 1461 aa27.15■■□□□ 1.94
IGHV3-42-201ENST00000520410 TSPOAP1O95153 1857 aa27.14■■□□□ 1.94
IGHV3-42-201ENST00000520410 UHRF1BP1LA0JNW5 1464 aa27.13■■□□□ 1.93
IGHV3-42-201ENST00000520410 GOLGA3Q08378 1498 aa27.13■■□□□ 1.93
IGHV3-42-201ENST00000520410 ASXL2Q76L83 1435 aa27.12■■□□□ 1.93
IGHV3-42-201ENST00000520410 PLB1Q6P1J6 1458 aa27.09■■□□□ 1.93
IGHV3-42-201ENST00000520410 FAM9AQ8IZU1 332 aaPredicted RBP27.08■■□□□ 1.93
IGHV3-42-201ENST00000520410 CSRNP3Q8WYN3 585 aa27.08■■□□□ 1.93
IGHV3-42-201ENST00000520410 KDM6BO15054 1643 aa27.05■■□□□ 1.92
IGHV3-42-201ENST00000520410 ZCCHC11Q5TAX3 1644 aaKnown RBP27.05■■□□□ 1.92
IGHV3-42-201ENST00000520410 P3H3Q8IVL6 736 aa27.02■■□□□ 1.92
IGHV3-42-201ENST00000520410 KDM5BQ9UGL1 1544 aa27.01■■□□□ 1.91
IGHV3-42-201ENST00000520410 RANGAP1P46060 587 aaPredicted RBP27■■□□□ 1.91
IGHV3-42-201ENST00000520410 EEA1Q15075 1411 aa26.99■■□□□ 1.91
IGHV3-42-201ENST00000520410 GLI2P10070 1586 aa26.94■■□□□ 1.9
IGHV3-42-201ENST00000520410 ARID3CA6NKF2 412 aa26.93■■□□□ 1.9
IGHV3-42-201ENST00000520410 EPRSP07814 1512 aaKnown RBP26.93■■□□□ 1.9
IGHV3-42-201ENST00000520410 ABCA8O94911 1581 aa26.9■■□□□ 1.9
IGHV3-42-201ENST00000520410 WDR7Q9Y4E6 1490 aa26.9■■□□□ 1.9
IGHV3-42-201ENST00000520410 EHMT2Q96KQ7 1210 aa26.89■■□□□ 1.9
IGHV3-42-201ENST00000520410 KCNH8Q96L42 1107 aa26.87■■□□□ 1.89
IGHV3-42-201ENST00000520410 PPRC1Q5VV67 1664 aaKnown RBP26.85■■□□□ 1.89
IGHV3-42-201ENST00000520410 MAP3K4Q9Y6R4 1608 aa26.83■■□□□ 1.89
IGHV3-42-201ENST00000520410 TEX14Q8IWB6 1497 aa26.82■■□□□ 1.88
IGHV3-42-201ENST00000520410 SAMD9Q5K651 1589 aa26.8■■□□□ 1.88
IGHV3-42-201ENST00000520410 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.8■■□□□ 1.88
IGHV3-42-201ENST00000520410 HNRNPUL2Q1KMD3 747 aaKnown RBP26.8■■□□□ 1.88
IGHV3-42-201ENST00000520410 KIF21BO75037 1637 aa26.76■■□□□ 1.87
IGHV3-42-201ENST00000520410 CHIC1Q5VXU3 224 aa26.75■■□□□ 1.87
IGHV3-42-201ENST00000520410 FHOD3Q2V2M9 1422 aa26.74■■□□□ 1.87
IGHV3-42-201ENST00000520410 RAPGEF6Q8TEU7 1601 aa26.73■■□□□ 1.87
IGHV3-42-201ENST00000520410 CD109Q6YHK3 1445 aa26.72■■□□□ 1.87
IGHV3-42-201ENST00000520410 UBTFP17480 764 aaKnown RBP26.71■■□□□ 1.87
IGHV3-42-201ENST00000520410 CFAP43Q8NDM7 1665 aa26.7■■□□□ 1.87
IGHV3-42-201ENST00000520410 ATP10BO94823 1461 aa26.69■■□□□ 1.86
IGHV3-42-201ENST00000520410 COL17A1Q9UMD9 1497 aaPredicted RBP26.64■■□□□ 1.86
IGHV3-42-201ENST00000520410 EFCAB5A4FU69 1503 aa26.63■■□□□ 1.85
IGHV3-42-201ENST00000520410 MAGI3Q5TCQ9 1506 aa26.61■■□□□ 1.85
IGHV3-42-201ENST00000520410 NUP153P49790 1475 aaKnown RBP26.58■■□□□ 1.85
IGHV3-42-201ENST00000520410 KDM4FA0A1W2PPD8 638 aa26.57■■□□□ 1.84
IGHV3-42-201ENST00000520410 ATP1B4Q9UN42 357 aaPredicted RBP26.56■■□□□ 1.84
IGHV3-42-201ENST00000520410 ABCA9Q8IUA7 1624 aa26.51■■□□□ 1.83
IGHV3-42-201ENST00000520410 ADGRL1O94910 1474 aa26.5■■□□□ 1.83
IGHV3-42-201ENST00000520410 PLEKHD1A6NEE1 506 aa26.5■■□□□ 1.83
IGHV3-42-201ENST00000520410 CDK13Q14004 1512 aaKnown RBP26.43■■□□□ 1.82
IGHV3-42-201ENST00000520410 FMN1Q68DA7 1419 aa26.41■■□□□ 1.82
IGHV3-42-201ENST00000520410 ARHGAP35Q9NRY4 1499 aa26.4■■□□□ 1.82
IGHV3-42-201ENST00000520410 HECW1Q76N89 1606 aa26.39■■□□□ 1.82
IGHV3-42-201ENST00000520410 ARAP3Q8WWN8 1544 aa26.38■■□□□ 1.81
IGHV3-42-201ENST00000520410 NEO1Q92859 1461 aa26.36■■□□□ 1.81
IGHV3-42-201ENST00000520410 PHLDB1Q86UU1 1377 aa26.35■■□□□ 1.81
IGHV3-42-201ENST00000520410 RAPGEF3O95398 923 aa26.34■■□□□ 1.81
IGHV3-42-201ENST00000520410 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.32■■□□□ 1.8
IGHV3-42-201ENST00000520410 TTC37Q6PGP7 1564 aa26.31■■□□□ 1.8
IGHV3-42-201ENST00000520410 CFAP74Q9C0B2 1584 aa26.29■■□□□ 1.8
IGHV3-42-201ENST00000520410 CDK11AQ9UQ88 783 aaPredicted RBP26.28■■□□□ 1.8
IGHV3-42-201ENST00000520410 FANCAO15360 1455 aa26.28■■□□□ 1.8
IGHV3-42-201ENST00000520410 AKNAQ7Z591 1439 aa26.24■■□□□ 1.79
IGHV3-42-201ENST00000520410 ARID4BQ4LE39 1312 aaPredicted RBP26.24■■□□□ 1.79
IGHV3-42-201ENST00000520410 DENND4BO75064 1496 aaPredicted RBP26.23■■□□□ 1.79
IGHV3-42-201ENST00000520410 FRMPD1Q5SYB0 1578 aa26.22■■□□□ 1.79
IGHV3-42-201ENST00000520410 CLIP1P30622 1438 aa26.2■■□□□ 1.78
IGHV3-42-201ENST00000520410 KIF14Q15058 1648 aa26.19■■□□□ 1.78
IGHV3-42-201ENST00000520410 PCF11O94913 1555 aaKnown RBP26.18■■□□□ 1.78
IGHV3-42-201ENST00000520410 MYO5CQ9NQX4 1742 aa26.14■■□□□ 1.78
IGHV3-42-201ENST00000520410 PLCH2O75038 1416 aa26.14■■□□□ 1.77
IGHV3-42-201ENST00000520410 TROQ12816 1431 aaPredicted RBP26.14■■□□□ 1.77
IGHV3-42-201ENST00000520410 RICTORQ6R327 1708 aa26.13■■□□□ 1.77
IGHV3-42-201ENST00000520410 LRRIQ1Q96JM4 1722 aa26.12■■□□□ 1.77
IGHV3-42-201ENST00000520410 ARHGEF40Q8TER5 1519 aa26.12■■□□□ 1.77
IGHV3-42-201ENST00000520410 CASKIN1Q8WXD9 1431 aa26.11■■□□□ 1.77
IGHV3-42-201ENST00000520410 CCDC18Q5T9S5 1454 aa26.11■■□□□ 1.77
IGHV3-42-201ENST00000520410 ARHGAP5Q13017 1502 aa26.1■■□□□ 1.77
IGHV3-42-201ENST00000520410 EFCAB2Q5VUJ9 269 aa26.1■■□□□ 1.77
IGHV3-42-201ENST00000520410 SCAPERQ9BY12 1400 aa26.1■■□□□ 1.77
IGHV3-42-201ENST00000520410 MYT1LQ9UL68 1186 aa26.08■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms