RNA–Protein interactions for RNA: ENST00000520140.5

VPS37A-206, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS37A, Length 2,102 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-206ENST00000520140 NUP160Q12769 1436 aa23.23■■□□□ 1.31
VPS37A-206ENST00000520140 RANGAP1P46060 587 aaPredicted RBP23.19■■□□□ 1.3
VPS37A-206ENST00000520140 CTTNBP2Q8WZ74 1663 aa23.18■■□□□ 1.3
VPS37A-206ENST00000520140 CLASP1Q7Z460 1538 aa23.16■■□□□ 1.3
VPS37A-206ENST00000520140 KIAA0586Q9BVV6 1533 aa23.14■■□□□ 1.29
VPS37A-206ENST00000520140 IQGAP2Q13576 1575 aa23.12■■□□□ 1.29
VPS37A-206ENST00000520140 JPH4Q96JJ6 628 aa23.08■■□□□ 1.29
VPS37A-206ENST00000520140 TNIKQ9UKE5 1360 aa23.02■■□□□ 1.28
VPS37A-206ENST00000520140 SHROOM2Q13796 1616 aa23.01■■□□□ 1.27
VPS37A-206ENST00000520140 ERCC6L2Q5T890 1561 aa23■■□□□ 1.27
VPS37A-206ENST00000520140 PRG4Q92954 1404 aaPredicted RBP23■■□□□ 1.27
VPS37A-206ENST00000520140 P3H3Q8IVL6 736 aa22.99■■□□□ 1.27
VPS37A-206ENST00000520140 TTBK1Q5TCY1 1321 aaPredicted RBP22.97■■□□□ 1.27
VPS37A-206ENST00000520140 UGGT2Q9NYU1 1516 aa22.96■■□□□ 1.27
VPS37A-206ENST00000520140 ARHGEF11O15085 1522 aa22.92■■□□□ 1.26
VPS37A-206ENST00000520140 DISP1Q96F81 1524 aa22.92■■□□□ 1.26
VPS37A-206ENST00000520140 DNAJC5Q9H3Z4 198 aa22.91■■□□□ 1.26
VPS37A-206ENST00000520140 CEP162Q5TB80 1403 aa22.9■■□□□ 1.26
VPS37A-206ENST00000520140 RIMBP3CA6NJZ7 1639 aa22.89■■□□□ 1.26
VPS37A-206ENST00000520140 RIMBP3BA6NNM3 1639 aa22.89■■□□□ 1.26
VPS37A-206ENST00000520140 RIMBP3Q9UFD9 1639 aa22.89■■□□□ 1.26
VPS37A-206ENST00000520140 CARMIL2Q6F5E8 1435 aa22.89■■□□□ 1.26
VPS37A-206ENST00000520140 KIAA0556O60303 1618 aa22.89■■□□□ 1.25
VPS37A-206ENST00000520140 CLIP1P30622 1438 aa22.87■■□□□ 1.25
VPS37A-206ENST00000520140 SAMD9Q5K651 1589 aa22.87■■□□□ 1.25
VPS37A-206ENST00000520140 ARHGAP35Q9NRY4 1499 aa22.85■■□□□ 1.25
VPS37A-206ENST00000520140 FHOD3Q2V2M9 1422 aa22.85■■□□□ 1.25
VPS37A-206ENST00000520140 EFCAB5A4FU69 1503 aa22.82■■□□□ 1.24
VPS37A-206ENST00000520140 CYB5RLQ6IPT4 315 aa22.78■■□□□ 1.24
VPS37A-206ENST00000520140 ARAP1Q96P48 1450 aa22.77■■□□□ 1.24
VPS37A-206ENST00000520140 PTPRGP23470 1445 aa22.77■■□□□ 1.24
VPS37A-206ENST00000520140 PLB1Q6P1J6 1458 aa22.68■■□□□ 1.22
VPS37A-206ENST00000520140 ATP1B4Q9UN42 357 aaPredicted RBP22.66■■□□□ 1.22
VPS37A-206ENST00000520140 ARID3CA6NKF2 412 aa22.65■■□□□ 1.22
VPS37A-206ENST00000520140 FMN1Q68DA7 1419 aa22.63■■□□□ 1.21
VPS37A-206ENST00000520140 UACAQ9BZF9 1416 aa22.61■■□□□ 1.21
VPS37A-206ENST00000520140 RAPGEF6Q8TEU7 1601 aa22.59■■□□□ 1.21
VPS37A-206ENST00000520140 ADCY10Q96PN6 1610 aa22.59■■□□□ 1.21
VPS37A-206ENST00000520140 ABCA8O94911 1581 aa22.58■■□□□ 1.21
VPS37A-206ENST00000520140 PCF11O94913 1555 aaKnown RBP22.58■■□□□ 1.2
VPS37A-206ENST00000520140 ABCC2Q92887 1545 aa22.55■■□□□ 1.2
VPS37A-206ENST00000520140 VPS8Q8N3P4 1428 aa22.55■■□□□ 1.2
VPS37A-206ENST00000520140 NUP153P49790 1475 aaKnown RBP22.51■■□□□ 1.19
VPS37A-206ENST00000520140 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.51■■□□□ 1.19
VPS37A-206ENST00000520140 HNRNPUL2Q1KMD3 747 aaKnown RBP22.51■■□□□ 1.19
VPS37A-206ENST00000520140 CASKIN1Q8WXD9 1431 aa22.5■■□□□ 1.19
VPS37A-206ENST00000520140 UHRF1BP1LA0JNW5 1464 aa22.49■■□□□ 1.19
VPS37A-206ENST00000520140 LRRIQ1Q96JM4 1722 aa22.49■■□□□ 1.19
VPS37A-206ENST00000520140 HECW1Q76N89 1606 aa22.49■■□□□ 1.19
VPS37A-206ENST00000520140 FYCO1Q9BQS8 1478 aa22.47■■□□□ 1.19
VPS37A-206ENST00000520140 NPM1P06748 294 aaKnown RBP eCLIP22.46■■□□□ 1.19
VPS37A-206ENST00000520140 CDK13Q14004 1512 aaKnown RBP22.46■■□□□ 1.19
VPS37A-206ENST00000520140 ZCCHC11Q5TAX3 1644 aaKnown RBP22.45■■□□□ 1.18
VPS37A-206ENST00000520140 ATP10BO94823 1461 aa22.44■■□□□ 1.18
VPS37A-206ENST00000520140 EPRSP07814 1512 aaKnown RBP22.43■■□□□ 1.18
VPS37A-206ENST00000520140 KDM5BQ9UGL1 1544 aa22.43■■□□□ 1.18
VPS37A-206ENST00000520140 APLP2Q06481 763 aa22.36■■□□□ 1.17
VPS37A-206ENST00000520140 CCDC18Q5T9S5 1454 aa22.35■■□□□ 1.17
VPS37A-206ENST00000520140 ASXL2Q76L83 1435 aa22.32■■□□□ 1.16
VPS37A-206ENST00000520140 PPARGC1BQ86YN6 1023 aaKnown RBP22.31■■□□□ 1.16
VPS37A-206ENST00000520140 KCNH8Q96L42 1107 aa22.31■■□□□ 1.16
VPS37A-206ENST00000520140 TIAM1Q13009 1591 aa22.31■■□□□ 1.16
VPS37A-206ENST00000520140 PLEKHD1A6NEE1 506 aa22.3■■□□□ 1.16
VPS37A-206ENST00000520140 CFAP43Q8NDM7 1665 aa22.3■■□□□ 1.16
VPS37A-206ENST00000520140 MAGI3Q5TCQ9 1506 aa22.29■■□□□ 1.16
VPS37A-206ENST00000520140 KANK4Q5T7N3 995 aaPredicted RBP22.28■■□□□ 1.16
VPS37A-206ENST00000520140 CDK11AQ9UQ88 783 aaPredicted RBP22.28■■□□□ 1.16
VPS37A-206ENST00000520140 MAPKBP1O60336 1514 aa22.28■■□□□ 1.16
VPS37A-206ENST00000520140 WDR7Q9Y4E6 1490 aa22.26■■□□□ 1.15
VPS37A-206ENST00000520140 MTUS2Q5JR59 1369 aa22.25■■□□□ 1.15
VPS37A-206ENST00000520140 TROQ12816 1431 aaPredicted RBP22.2■■□□□ 1.15
VPS37A-206ENST00000520140 LRRC9Q6ZRR7 1453 aa22.2■■□□□ 1.14
VPS37A-206ENST00000520140 MAP3K1Q13233 1512 aa22.2■■□□□ 1.14
VPS37A-206ENST00000520140 KIF14Q15058 1648 aa22.2■■□□□ 1.14
VPS37A-206ENST00000520140 TRHP20396 242 aaPredicted RBP22.19■■□□□ 1.14
VPS37A-206ENST00000520140 FAM69CQ0P6D2 419 aa22.17■■□□□ 1.14
VPS37A-206ENST00000520140 EHBP1L1Q8N3D4 1523 aa22.16■■□□□ 1.14
VPS37A-206ENST00000520140 DIP2BQ9P265 1576 aa22.15■■□□□ 1.14
VPS37A-206ENST00000520140 KIF13AQ9H1H9 1805 aa22.14■■□□□ 1.13
VPS37A-206ENST00000520140 ABCC10Q5T3U5 1492 aa22.14■■□□□ 1.13
VPS37A-206ENST00000520140 TTC37Q6PGP7 1564 aa22.11■■□□□ 1.13
VPS37A-206ENST00000520140 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.11■■□□□ 1.13
VPS37A-206ENST00000520140 SUPT6HQ7KZ85 1726 aaKnown RBP22.1■■□□□ 1.13
VPS37A-206ENST00000520140 TSPOAP1O95153 1857 aa22.09■■□□□ 1.13
VPS37A-206ENST00000520140 NCOA2Q15596 1464 aa22.08■■□□□ 1.12
VPS37A-206ENST00000520140 ABCA9Q8IUA7 1624 aa22.06■■□□□ 1.12
VPS37A-206ENST00000520140 GLI2P10070 1586 aa22.04■■□□□ 1.12
VPS37A-206ENST00000520140 CD109Q6YHK3 1445 aa22.03■■□□□ 1.12
VPS37A-206ENST00000520140 MAP3K4Q9Y6R4 1608 aa22.02■■□□□ 1.12
VPS37A-206ENST00000520140 CCNB3Q8WWL7 1395 aa22.02■■□□□ 1.12
VPS37A-206ENST00000520140 CDC42BPAQ5VT25 1732 aa22.01■■□□□ 1.11
VPS37A-206ENST00000520140 MYO5CQ9NQX4 1742 aa22.01■■□□□ 1.11
VPS37A-206ENST00000520140 PHLDB1Q86UU1 1377 aa22■■□□□ 1.11
VPS37A-206ENST00000520140 GPATCH8Q9UKJ3 1502 aaKnown RBP21.98■■□□□ 1.11
VPS37A-206ENST00000520140 CDC42BPBQ9Y5S2 1711 aa21.97■■□□□ 1.11
VPS37A-206ENST00000520140 ZNF777Q9ULD5 760 aaPredicted RBP21.97■■□□□ 1.11
VPS37A-206ENST00000520140 PREX2Q70Z35 1606 aa21.95■■□□□ 1.1
VPS37A-206ENST00000520140 ARHGAP5Q13017 1502 aa21.95■■□□□ 1.1
VPS37A-206ENST00000520140 PLCH2O75038 1416 aa21.95■■□□□ 1.1
VPS37A-206ENST00000520140 PPRC1Q5VV67 1664 aaKnown RBP21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms