RNA–Protein interactions for RNA: ENST00000520058.1

SREK1-207, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-207ENST00000520058 KIAA0586Q9BVV6 1533 aa30.86■■■□□ 2.53
SREK1-207ENST00000520058 JPH4Q96JJ6 628 aa30.84■■■□□ 2.53
SREK1-207ENST00000520058 EEA1Q15075 1411 aa30.79■■■□□ 2.52
SREK1-207ENST00000520058 PRG4Q92954 1404 aaPredicted RBP30.78■■■□□ 2.52
SREK1-207ENST00000520058 CHIC1Q5VXU3 224 aa30.76■■■□□ 2.51
SREK1-207ENST00000520058 ERCC6L2Q5T890 1561 aa30.74■■■□□ 2.51
SREK1-207ENST00000520058 IQGAP2Q13576 1575 aa30.72■■■□□ 2.51
SREK1-207ENST00000520058 CSRNP3Q8WYN3 585 aa30.7■■■□□ 2.51
SREK1-207ENST00000520058 CTTNBP2Q8WZ74 1663 aa30.69■■■□□ 2.5
SREK1-207ENST00000520058 PRXQ9BXM0 1461 aa30.67■■■□□ 2.5
SREK1-207ENST00000520058 CARMIL2Q6F5E8 1435 aa30.62■■■□□ 2.49
SREK1-207ENST00000520058 FAM9AQ8IZU1 332 aaPredicted RBP30.56■■■□□ 2.48
SREK1-207ENST00000520058 UGGT2Q9NYU1 1516 aa30.5■■■□□ 2.47
SREK1-207ENST00000520058 KIF21BO75037 1637 aa30.44■■■□□ 2.46
SREK1-207ENST00000520058 TNIKQ9UKE5 1360 aa30.44■■■□□ 2.46
SREK1-207ENST00000520058 PTPRGP23470 1445 aa30.43■■■□□ 2.46
SREK1-207ENST00000520058 GOLGA3Q08378 1498 aa30.43■■■□□ 2.46
SREK1-207ENST00000520058 TRHP20396 242 aaPredicted RBP30.41■■■□□ 2.46
SREK1-207ENST00000520058 DISP1Q96F81 1524 aa30.4■■■□□ 2.46
SREK1-207ENST00000520058 KIAA0556O60303 1618 aa30.4■■■□□ 2.46
SREK1-207ENST00000520058 NPM1P06748 294 aaKnown RBP eCLIP30.39■■■□□ 2.46
SREK1-207ENST00000520058 TTBK1Q5TCY1 1321 aaPredicted RBP30.37■■■□□ 2.45
SREK1-207ENST00000520058 ADCY10Q96PN6 1610 aa30.31■■■□□ 2.44
SREK1-207ENST00000520058 UBTFP17480 764 aaKnown RBP30.22■■■□□ 2.43
SREK1-207ENST00000520058 UACAQ9BZF9 1416 aa30.22■■■□□ 2.43
SREK1-207ENST00000520058 UHRF1BP1LA0JNW5 1464 aa30.19■■■□□ 2.42
SREK1-207ENST00000520058 ABCC2Q92887 1545 aa30.17■■■□□ 2.42
SREK1-207ENST00000520058 SAMD9Q5K651 1589 aa30.17■■■□□ 2.42
SREK1-207ENST00000520058 MAPKBP1O60336 1514 aa30.16■■■□□ 2.42
SREK1-207ENST00000520058 EHMT2Q96KQ7 1210 aa30.14■■■□□ 2.42
SREK1-207ENST00000520058 RANGAP1P46060 587 aaPredicted RBP30.12■■■□□ 2.41
SREK1-207ENST00000520058 P3H3Q8IVL6 736 aa30.1■■■□□ 2.41
SREK1-207ENST00000520058 EFCAB5A4FU69 1503 aa30.1■■■□□ 2.41
SREK1-207ENST00000520058 KIF13AQ9H1H9 1805 aa30.09■■■□□ 2.41
SREK1-207ENST00000520058 PLB1Q6P1J6 1458 aa30.04■■■□□ 2.4
SREK1-207ENST00000520058 ABCA8O94911 1581 aa30.03■■■□□ 2.4
SREK1-207ENST00000520058 KDM5BQ9UGL1 1544 aa30.03■■■□□ 2.4
SREK1-207ENST00000520058 ZCCHC11Q5TAX3 1644 aaKnown RBP30.02■■■□□ 2.4
SREK1-207ENST00000520058 ABCC10Q5T3U5 1492 aa30■■■□□ 2.39
SREK1-207ENST00000520058 DIP2BQ9P265 1576 aa29.97■■■□□ 2.39
SREK1-207ENST00000520058 FAM69CQ0P6D2 419 aa29.96■■■□□ 2.39
SREK1-207ENST00000520058 ASXL2Q76L83 1435 aa29.95■■■□□ 2.38
SREK1-207ENST00000520058 RAPGEF6Q8TEU7 1601 aa29.94■■■□□ 2.38
SREK1-207ENST00000520058 FHOD3Q2V2M9 1422 aa29.94■■■□□ 2.38
SREK1-207ENST00000520058 TSPOAP1O95153 1857 aa29.86■■■□□ 2.37
SREK1-207ENST00000520058 GLI2P10070 1586 aa29.82■■■□□ 2.36
SREK1-207ENST00000520058 FMN1Q68DA7 1419 aa29.82■■■□□ 2.36
SREK1-207ENST00000520058 ARHGAP35Q9NRY4 1499 aa29.81■■■□□ 2.36
SREK1-207ENST00000520058 WDR7Q9Y4E6 1490 aa29.81■■■□□ 2.36
SREK1-207ENST00000520058 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.79■■■□□ 2.36
SREK1-207ENST00000520058 HNRNPUL2Q1KMD3 747 aaKnown RBP29.79■■■□□ 2.36
SREK1-207ENST00000520058 EPRSP07814 1512 aaKnown RBP29.77■■■□□ 2.36
SREK1-207ENST00000520058 ATP10BO94823 1461 aa29.76■■■□□ 2.35
SREK1-207ENST00000520058 ARID3CA6NKF2 412 aa29.75■■■□□ 2.35
SREK1-207ENST00000520058 NUP153P49790 1475 aaKnown RBP29.73■■■□□ 2.35
SREK1-207ENST00000520058 HECW1Q76N89 1606 aa29.7■■■□□ 2.34
SREK1-207ENST00000520058 KCNH8Q96L42 1107 aa29.69■■■□□ 2.34
SREK1-207ENST00000520058 MAP3K4Q9Y6R4 1608 aa29.69■■■□□ 2.34
SREK1-207ENST00000520058 CFAP43Q8NDM7 1665 aa29.68■■■□□ 2.34
SREK1-207ENST00000520058 CLIP1P30622 1438 aa29.68■■■□□ 2.34
SREK1-207ENST00000520058 ATP1B4Q9UN42 357 aaPredicted RBP29.67■■■□□ 2.34
SREK1-207ENST00000520058 PLEKHD1A6NEE1 506 aa29.63■■■□□ 2.33
SREK1-207ENST00000520058 TEX14Q8IWB6 1497 aa29.62■■■□□ 2.33
SREK1-207ENST00000520058 PPRC1Q5VV67 1664 aaKnown RBP29.6■■■□□ 2.33
SREK1-207ENST00000520058 KDM6BO15054 1643 aa29.57■■■□□ 2.32
SREK1-207ENST00000520058 CDK11AQ9UQ88 783 aaPredicted RBP29.56■■■□□ 2.32
SREK1-207ENST00000520058 CD109Q6YHK3 1445 aa29.55■■■□□ 2.32
SREK1-207ENST00000520058 ABCA9Q8IUA7 1624 aa29.53■■■□□ 2.32
SREK1-207ENST00000520058 CDK13Q14004 1512 aaKnown RBP29.52■■■□□ 2.32
SREK1-207ENST00000520058 CEP162Q5TB80 1403 aa29.51■■■□□ 2.31
SREK1-207ENST00000520058 CASKIN1Q8WXD9 1431 aa29.51■■■□□ 2.31
SREK1-207ENST00000520058 PCF11O94913 1555 aaKnown RBP29.5■■■□□ 2.31
SREK1-207ENST00000520058 MAGI3Q5TCQ9 1506 aa29.49■■■□□ 2.31
SREK1-207ENST00000520058 LOC105371045A0A1W2PR82 267 aa29.48■■■□□ 2.31
SREK1-207ENST00000520058 CCDC18Q5T9S5 1454 aa29.48■■■□□ 2.31
SREK1-207ENST00000520058 LRRIQ1Q96JM4 1722 aa29.47■■■□□ 2.31
SREK1-207ENST00000520058 FYCO1Q9BQS8 1478 aa29.47■■■□□ 2.31
SREK1-207ENST00000520058 PHLDB1Q86UU1 1377 aa29.36■■■□□ 2.29
SREK1-207ENST00000520058 KIF14Q15058 1648 aa29.35■■■□□ 2.29
SREK1-207ENST00000520058 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.35■■■□□ 2.29
SREK1-207ENST00000520058 TROQ12816 1431 aaPredicted RBP29.33■■■□□ 2.29
SREK1-207ENST00000520058 CFAP74Q9C0B2 1584 aa29.32■■■□□ 2.28
SREK1-207ENST00000520058 TTC37Q6PGP7 1564 aa29.3■■■□□ 2.28
SREK1-207ENST00000520058 NEO1Q92859 1461 aa29.3■■■□□ 2.28
SREK1-207ENST00000520058 MYO5CQ9NQX4 1742 aa29.3■■■□□ 2.28
SREK1-207ENST00000520058 ARAP3Q8WWN8 1544 aa29.25■■■□□ 2.27
SREK1-207ENST00000520058 FANCAO15360 1455 aa29.22■■■□□ 2.27
SREK1-207ENST00000520058 COL17A1Q9UMD9 1497 aaPredicted RBP29.22■■■□□ 2.27
SREK1-207ENST00000520058 PLCH2O75038 1416 aa29.19■■■□□ 2.26
SREK1-207ENST00000520058 VPS8Q8N3P4 1428 aa29.19■■■□□ 2.26
SREK1-207ENST00000520058 MTUS2Q5JR59 1369 aa29.15■■■□□ 2.26
SREK1-207ENST00000520058 AKNAQ7Z591 1439 aa29.14■■■□□ 2.26
SREK1-207ENST00000520058 EFCAB2Q5VUJ9 269 aa29.14■■■□□ 2.26
SREK1-207ENST00000520058 ARHGAP5Q13017 1502 aa29.11■■■□□ 2.25
SREK1-207ENST00000520058 CDC42BPBQ9Y5S2 1711 aa29.1■■■□□ 2.25
SREK1-207ENST00000520058 EHBP1L1Q8N3D4 1523 aa29.09■■■□□ 2.25
SREK1-207ENST00000520058 PREX2Q70Z35 1606 aa29.09■■■□□ 2.25
SREK1-207ENST00000520058 CDC42BPAQ5VT25 1732 aa29.08■■■□□ 2.25
SREK1-207ENST00000520058 DENND4BO75064 1496 aaPredicted RBP29.08■■■□□ 2.25
SREK1-207ENST00000520058 ADGRL1O94910 1474 aa29.06■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms