RNA–Protein interactions for RNA: ENST00000519656.1

EFR3A-202, Transcript of EFR3 homolog A, humanhuman

TSL 1 (best) BASIC

Gene EFR3A, Length 5,247 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFR3A-202ENST00000519656 CERKQ8TCT0 537 aa4.56□□□□□ -1.68
EFR3A-202ENST00000519656 STAG3Q9UJ98 1225 aa4.56□□□□□ -1.68
EFR3A-202ENST00000519656 SYNJ2O15056 1496 aa4.56□□□□□ -1.68
EFR3A-202ENST00000519656 TOP2BQ02880 1626 aa4.55□□□□□ -1.68
EFR3A-202ENST00000519656 PLB1Q6P1J6 1458 aa4.55□□□□□ -1.68
EFR3A-202ENST00000519656 MEX3CQ5U5Q3 659 aaKnown RBP4.55□□□□□ -1.68
EFR3A-202ENST00000519656 SF3B2Q13435 895 aaKnown RBP4.55□□□□□ -1.68
EFR3A-202ENST00000519656 APLP2Q06481 763 aa4.54□□□□□ -1.68
EFR3A-202ENST00000519656 PRG4Q92954 1404 aaPredicted RBP4.54□□□□□ -1.68
EFR3A-202ENST00000519656 TOPBP1Q92547 1522 aa4.54□□□□□ -1.68
EFR3A-202ENST00000519656 FHAD1B1AJZ9 1412 aa4.53□□□□□ -1.68
EFR3A-202ENST00000519656 NCBP3Q53F19 620 aaKnown RBP4.53□□□□□ -1.68
EFR3A-202ENST00000519656 SNAPC4Q5SXM2 1469 aa4.53□□□□□ -1.68
EFR3A-202ENST00000519656 ARAP1Q96P48 1450 aa4.53□□□□□ -1.68
EFR3A-202ENST00000519656 EFCAB2Q5VUJ9 269 aa4.53□□□□□ -1.68
EFR3A-202ENST00000519656 RIMBP3CA6NJZ7 1639 aa4.53□□□□□ -1.68
EFR3A-202ENST00000519656 RIMBP3BA6NNM3 1639 aa4.53□□□□□ -1.68
EFR3A-202ENST00000519656 RIMBP3Q9UFD9 1639 aa4.53□□□□□ -1.68
EFR3A-202ENST00000519656 HDGFP51858 240 aaKnown RBP4.52□□□□□ -1.69
EFR3A-202ENST00000519656 THOC2Q8NI27 1593 aaKnown RBP4.52□□□□□ -1.69
EFR3A-202ENST00000519656 CNKSR2Q8WXI2 1034 aa4.52□□□□□ -1.69
EFR3A-202ENST00000519656 C14orf37Q86TY3 774 aa4.52□□□□□ -1.69
EFR3A-202ENST00000519656 EHMT2Q96KQ7 1210 aa4.52□□□□□ -1.69
EFR3A-202ENST00000519656 TNIKQ9UKE5 1360 aa4.52□□□□□ -1.69
EFR3A-202ENST00000519656 KIF27Q86VH2 1401 aa4.51□□□□□ -1.69
EFR3A-202ENST00000519656 HOXD11P31277 338 aaPredicted RBP4.51□□□□□ -1.69
EFR3A-202ENST00000519656 RANGAP1P46060 587 aaPredicted RBP4.5□□□□□ -1.69
EFR3A-202ENST00000519656 ZNF608Q9ULD9 1512 aaPredicted RBP4.5□□□□□ -1.69
EFR3A-202ENST00000519656 ZRANB1Q9UGI0 708 aa4.5□□□□□ -1.69
EFR3A-202ENST00000519656 UBTFP17480 764 aaKnown RBP4.49□□□□□ -1.69
EFR3A-202ENST00000519656 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.49□□□□□ -1.69
EFR3A-202ENST00000519656 RNF216Q9NWF9 866 aaPredicted RBP4.49□□□□□ -1.69
EFR3A-202ENST00000519656 URB2Q14146 1524 aaKnown RBP4.49□□□□□ -1.69
EFR3A-202ENST00000519656 DNMBPQ6XZF7 1577 aa4.49□□□□□ -1.69
EFR3A-202ENST00000519656 PEG3Q9GZU2 1588 aa4.48□□□□□ -1.69
EFR3A-202ENST00000519656 TOP2AP11388 1531 aaKnown RBP4.48□□□□□ -1.69
EFR3A-202ENST00000519656 PPP4R3CPQ6ZMV5 832 aa4.48□□□□□ -1.69
EFR3A-202ENST00000519656 PIP4K2BP78356 416 aa4.48□□□□□ -1.69
EFR3A-202ENST00000519656 ARID3CA6NKF2 412 aa4.47□□□□□ -1.69
EFR3A-202ENST00000519656 EID1Q9Y6B2 187 aa4.47□□□□□ -1.69
EFR3A-202ENST00000519656 POLA1P09884 1462 aaPredicted RBP4.47□□□□□ -1.69
EFR3A-202ENST00000519656 KDM4FA0A1W2PPD8 638 aa4.47□□□□□ -1.69
EFR3A-202ENST00000519656 CD109Q6YHK3 1445 aa4.46□□□□□ -1.69
EFR3A-202ENST00000519656 KDM6BO15054 1643 aa4.46□□□□□ -1.69
EFR3A-202ENST00000519656 FGD5Q6ZNL6 1462 aa4.46□□□□□ -1.69
EFR3A-202ENST00000519656 AKNAQ7Z591 1439 aa4.46□□□□□ -1.7
EFR3A-202ENST00000519656 CARMIL1Q5VZK9 1371 aa4.46□□□□□ -1.7
EFR3A-202ENST00000519656 GOLGA3Q08378 1498 aa4.46□□□□□ -1.7
EFR3A-202ENST00000519656 ABCC10Q5T3U5 1492 aa4.46□□□□□ -1.7
EFR3A-202ENST00000519656 RAD54L2Q9Y4B4 1467 aa4.46□□□□□ -1.7
EFR3A-202ENST00000519656 PKD2Q13563 968 aa4.45□□□□□ -1.7
EFR3A-202ENST00000519656 SPATA31D1Q6ZQQ2 1576 aa4.45□□□□□ -1.7
EFR3A-202ENST00000519656 HSPA2P54652 639 aa4.45□□□□□ -1.7
EFR3A-202ENST00000519656 THEMISQ8N1K5 641 aaPredicted RBP4.45□□□□□ -1.7
EFR3A-202ENST00000519656 KIF21AQ7Z4S6 1674 aa4.45□□□□□ -1.7
EFR3A-202ENST00000519656 CCDC88BA6NC98 1476 aa4.45□□□□□ -1.7
EFR3A-202ENST00000519656 PPP1R15AO75807 674 aaPredicted RBP4.44□□□□□ -1.7
EFR3A-202ENST00000519656 HAP1P54257 671 aaPredicted RBP4.44□□□□□ -1.7
EFR3A-202ENST00000519656 WDR97A6NE52 1622 aa4.44□□□□□ -1.7
EFR3A-202ENST00000519656 GRIN2AQ12879 1464 aa4.44□□□□□ -1.7
EFR3A-202ENST00000519656 TSPY4P0CV99 314 aa4.44□□□□□ -1.7
EFR3A-202ENST00000519656 TSPY10P0CW01 314 aa4.44□□□□□ -1.7
EFR3A-202ENST00000519656 ANKLE2Q86XL3 938 aa4.44□□□□□ -1.7
EFR3A-202ENST00000519656 UACAQ9BZF9 1416 aa4.44□□□□□ -1.7
EFR3A-202ENST00000519656 ZNF777Q9ULD5 760 aaPredicted RBP4.43□□□□□ -1.7
EFR3A-202ENST00000519656 P3H3Q8IVL6 736 aa4.43□□□□□ -1.7
EFR3A-202ENST00000519656 KIAA0586Q9BVV6 1533 aa4.42□□□□□ -1.7
EFR3A-202ENST00000519656 UHRF1BP1Q6BDS2 1440 aa4.42□□□□□ -1.7
EFR3A-202ENST00000519656 ADGRL1O94910 1474 aa4.42□□□□□ -1.7
EFR3A-202ENST00000519656 RAPGEF3O95398 923 aa4.42□□□□□ -1.7
EFR3A-202ENST00000519656 NGLY1Q96IV0 654 aa4.42□□□□□ -1.7
EFR3A-202ENST00000519656 A0A0G2JS52 829 aa4.41□□□□□ -1.7
EFR3A-202ENST00000519656 MYT1Q01538 1121 aa4.41□□□□□ -1.7
EFR3A-202ENST00000519656 PPP1R1BQ9UD71 204 aaPredicted RBP4.41□□□□□ -1.7
EFR3A-202ENST00000519656 ASXL2Q76L83 1435 aa4.41□□□□□ -1.7
EFR3A-202ENST00000519656 C1QBPQ07021 282 aaKnown RBP4.4□□□□□ -1.7
EFR3A-202ENST00000519656 RBM33Q96EV2 1170 aaKnown RBP4.4□□□□□ -1.7
EFR3A-202ENST00000519656 ZNF772Q68DY9 489 aaPredicted RBP4.4□□□□□ -1.71
EFR3A-202ENST00000519656 GGT6Q6P531 493 aa4.4□□□□□ -1.71
EFR3A-202ENST00000519656 EIF4G3O43432 1585 aaKnown RBP4.4□□□□□ -1.71
EFR3A-202ENST00000519656 NUTM2BA6NNL0 878 aaPredicted RBP4.39□□□□□ -1.71
EFR3A-202ENST00000519656 NUTM2EB1AL46 878 aaPredicted RBP4.39□□□□□ -1.71
EFR3A-202ENST00000519656 NUTM2DQ5VT03 806 aaPredicted RBP4.39□□□□□ -1.71
EFR3A-202ENST00000519656 NUTM2AQ8IVF1 878 aaPredicted RBP4.39□□□□□ -1.71
EFR3A-202ENST00000519656 FANCAO15360 1455 aa4.39□□□□□ -1.71
EFR3A-202ENST00000519656 CLIP1P30622 1438 aa4.39□□□□□ -1.71
EFR3A-202ENST00000519656 YEATS2Q9ULM3 1422 aa4.39□□□□□ -1.71
EFR3A-202ENST00000519656 HMGB2P26583 209 aaKnown RBP4.39□□□□□ -1.71
EFR3A-202ENST00000519656 DENND4BO75064 1496 aaPredicted RBP4.38□□□□□ -1.71
EFR3A-202ENST00000519656 NUP160Q12769 1436 aa4.38□□□□□ -1.71
EFR3A-202ENST00000519656 ABCA10Q8WWZ4 1543 aa4.38□□□□□ -1.71
EFR3A-202ENST00000519656 ATF3P18847 181 aa4.37□□□□□ -1.71
EFR3A-202ENST00000519656 RSPH4AQ5TD94 716 aa4.37□□□□□ -1.71
EFR3A-202ENST00000519656 SPAG9O60271 1321 aaKnown RBP4.37□□□□□ -1.71
EFR3A-202ENST00000519656 PROSER2Q86WR7 435 aaPredicted RBP4.37□□□□□ -1.71
EFR3A-202ENST00000519656 ABCC2Q92887 1545 aa4.36□□□□□ -1.71
EFR3A-202ENST00000519656 CNTLNQ9NXG0 1405 aa4.36□□□□□ -1.71
EFR3A-202ENST00000519656 CSRNP3Q8WYN3 585 aa4.36□□□□□ -1.71
EFR3A-202ENST00000519656 MAPK8IP2Q13387 824 aaPredicted RBP4.36□□□□□ -1.71
EFR3A-202ENST00000519656 WIZO95785 1651 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms