RNA–Protein interactions for RNA: ENST00000519503.5

CHMP7-205, Transcript of charged multivesicular body protein 7, humanhuman

TSL 2

Gene CHMP7, Length 917 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7-205ENST00000519503 PRG4Q92954 1404 aaPredicted RBP37.54■■■■□ 3.6
CHMP7-205ENST00000519503 JPH4Q96JJ6 628 aa37.52■■■■□ 3.6
CHMP7-205ENST00000519503 KIAA0586Q9BVV6 1533 aa37.44■■■■□ 3.58
CHMP7-205ENST00000519503 CARMIL1Q5VZK9 1371 aa37.37■■■■□ 3.57
CHMP7-205ENST00000519503 IQGAP2Q13576 1575 aa37.16■■■■□ 3.54
CHMP7-205ENST00000519503 ADCY10Q96PN6 1610 aa37.12■■■■□ 3.53
CHMP7-205ENST00000519503 RAPGEF2Q9Y4G8 1499 aa37.11■■■■□ 3.53
CHMP7-205ENST00000519503 KIF13AQ9H1H9 1805 aa37.1■■■■□ 3.53
CHMP7-205ENST00000519503 NPM1P06748 294 aaKnown RBP eCLIP37.08■■■■□ 3.53
CHMP7-205ENST00000519503 CARMIL2Q6F5E8 1435 aa37.08■■■■□ 3.53
CHMP7-205ENST00000519503 MAPKBP1O60336 1514 aa37.05■■■■□ 3.52
CHMP7-205ENST00000519503 PTPRGP23470 1445 aa37.01■■■■□ 3.51
CHMP7-205ENST00000519503 TNIKQ9UKE5 1360 aa36.98■■■■□ 3.51
CHMP7-205ENST00000519503 ABCC10Q5T3U5 1492 aa36.94■■■■□ 3.5
CHMP7-205ENST00000519503 UGGT2Q9NYU1 1516 aa36.91■■■■□ 3.5
CHMP7-205ENST00000519503 DISP1Q96F81 1524 aa36.9■■■■□ 3.5
CHMP7-205ENST00000519503 DIP2BQ9P265 1576 aa36.88■■■■□ 3.49
CHMP7-205ENST00000519503 CTTNBP2Q8WZ74 1663 aa36.88■■■■□ 3.49
CHMP7-205ENST00000519503 FAM69CQ0P6D2 419 aa36.83■■■■□ 3.49
CHMP7-205ENST00000519503 TTBK1Q5TCY1 1321 aaPredicted RBP36.82■■■■□ 3.48
CHMP7-205ENST00000519503 ABCC2Q92887 1545 aa36.81■■■■□ 3.48
CHMP7-205ENST00000519503 KIAA0556O60303 1618 aa36.8■■■■□ 3.48
CHMP7-205ENST00000519503 UHRF1BP1LA0JNW5 1464 aa36.79■■■■□ 3.48
CHMP7-205ENST00000519503 PRXQ9BXM0 1461 aa36.78■■■■□ 3.48
CHMP7-205ENST00000519503 UACAQ9BZF9 1416 aa36.75■■■■□ 3.47
CHMP7-205ENST00000519503 GOLGA3Q08378 1498 aa36.67■■■■□ 3.46
CHMP7-205ENST00000519503 PLB1Q6P1J6 1458 aa36.64■■■■□ 3.46
CHMP7-205ENST00000519503 ASXL2Q76L83 1435 aa36.62■■■■□ 3.45
CHMP7-205ENST00000519503 TSPOAP1O95153 1857 aa36.61■■■■□ 3.45
CHMP7-205ENST00000519503 KDM5BQ9UGL1 1544 aa36.6■■■■□ 3.45
CHMP7-205ENST00000519503 ZCCHC11Q5TAX3 1644 aaKnown RBP36.56■■■■□ 3.44
CHMP7-205ENST00000519503 GLI2P10070 1586 aa36.55■■■■□ 3.44
CHMP7-205ENST00000519503 EEA1Q15075 1411 aa36.54■■■■□ 3.44
CHMP7-205ENST00000519503 CSRNP3Q8WYN3 585 aa36.53■■■■□ 3.44
CHMP7-205ENST00000519503 KDM6BO15054 1643 aa36.49■■■■□ 3.43
CHMP7-205ENST00000519503 ABCA8O94911 1581 aa36.43■■■■□ 3.42
CHMP7-205ENST00000519503 AEBP2Q6ZN18 517 aaPredicted RBP36.42■■■■□ 3.42
CHMP7-205ENST00000519503 EPRSP07814 1512 aaKnown RBP36.41■■■■□ 3.42
CHMP7-205ENST00000519503 PPRC1Q5VV67 1664 aaKnown RBP36.39■■■■□ 3.42
CHMP7-205ENST00000519503 MAP3K4Q9Y6R4 1608 aa36.37■■■■□ 3.41
CHMP7-205ENST00000519503 WDR7Q9Y4E6 1490 aa36.35■■■■□ 3.41
CHMP7-205ENST00000519503 FAM9AQ8IZU1 332 aaPredicted RBP36.34■■■■□ 3.41
CHMP7-205ENST00000519503 SAMD9Q5K651 1589 aa36.32■■■■□ 3.41
CHMP7-205ENST00000519503 TEX14Q8IWB6 1497 aa36.25■■■■□ 3.39
CHMP7-205ENST00000519503 KIF21BO75037 1637 aa36.23■■■■□ 3.39
CHMP7-205ENST00000519503 P3H3Q8IVL6 736 aa36.19■■■■□ 3.38
CHMP7-205ENST00000519503 CFAP43Q8NDM7 1665 aa36.17■■■■□ 3.38
CHMP7-205ENST00000519503 RAPGEF6Q8TEU7 1601 aa36.12■■■■□ 3.37
CHMP7-205ENST00000519503 ATP10BO94823 1461 aa36.08■■■■□ 3.37
CHMP7-205ENST00000519503 CHIC1Q5VXU3 224 aa36.06■■■■□ 3.36
CHMP7-205ENST00000519503 KCNH8Q96L42 1107 aa36.06■■■■□ 3.36
CHMP7-205ENST00000519503 MAGI3Q5TCQ9 1506 aa36.06■■■■□ 3.36
CHMP7-205ENST00000519503 CD109Q6YHK3 1445 aa36.06■■■■□ 3.36
CHMP7-205ENST00000519503 EFCAB5A4FU69 1503 aa36.05■■■■□ 3.36
CHMP7-205ENST00000519503 COL17A1Q9UMD9 1497 aaPredicted RBP36.03■■■■□ 3.36
CHMP7-205ENST00000519503 FHOD3Q2V2M9 1422 aa36■■■■□ 3.35
CHMP7-205ENST00000519503 RANGAP1P46060 587 aaPredicted RBP35.99■■■■□ 3.35
CHMP7-205ENST00000519503 ARID3CA6NKF2 412 aa35.98■■■■□ 3.35
CHMP7-205ENST00000519503 NUP153P49790 1475 aaKnown RBP35.94■■■■□ 3.34
CHMP7-205ENST00000519503 ABCA9Q8IUA7 1624 aa35.92■■■■□ 3.34
CHMP7-205ENST00000519503 KDM4FA0A1W2PPD8 638 aa35.87■■■■□ 3.33
CHMP7-205ENST00000519503 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.85■■■■□ 3.33
CHMP7-205ENST00000519503 HNRNPUL2Q1KMD3 747 aaKnown RBP35.85■■■■□ 3.33
CHMP7-205ENST00000519503 UBTFP17480 764 aaKnown RBP35.84■■■■□ 3.33
CHMP7-205ENST00000519503 ARAP3Q8WWN8 1544 aa35.78■■■■□ 3.32
CHMP7-205ENST00000519503 PHLDB1Q86UU1 1377 aa35.76■■■■□ 3.32
CHMP7-205ENST00000519503 ADGRL1O94910 1474 aa35.74■■■■□ 3.31
CHMP7-205ENST00000519503 EHMT2Q96KQ7 1210 aa35.73■■■■□ 3.31
CHMP7-205ENST00000519503 PLEKHD1A6NEE1 506 aa35.71■■■■□ 3.31
CHMP7-205ENST00000519503 NEO1Q92859 1461 aa35.7■■■■□ 3.31
CHMP7-205ENST00000519503 FMN1Q68DA7 1419 aa35.69■■■■□ 3.3
CHMP7-205ENST00000519503 ARHGAP35Q9NRY4 1499 aa35.67■■■■□ 3.3
CHMP7-205ENST00000519503 HECW1Q76N89 1606 aa35.64■■■■□ 3.3
CHMP7-205ENST00000519503 CDK13Q14004 1512 aaKnown RBP35.6■■■■□ 3.29
CHMP7-205ENST00000519503 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.57■■■■□ 3.29
CHMP7-205ENST00000519503 CFAP74Q9C0B2 1584 aa35.57■■■■□ 3.28
CHMP7-205ENST00000519503 TTC37Q6PGP7 1564 aa35.53■■■■□ 3.28
CHMP7-205ENST00000519503 FRMPD1Q5SYB0 1578 aa35.48■■■■□ 3.27
CHMP7-205ENST00000519503 FANCAO15360 1455 aa35.48■■■■□ 3.27
CHMP7-205ENST00000519503 ATP1B4Q9UN42 357 aaPredicted RBP35.47■■■■□ 3.27
CHMP7-205ENST00000519503 RAPGEF3O95398 923 aa35.46■■■■□ 3.27
CHMP7-205ENST00000519503 CDK11AQ9UQ88 783 aaPredicted RBP35.44■■■■□ 3.26
CHMP7-205ENST00000519503 AKNAQ7Z591 1439 aa35.43■■■■□ 3.26
CHMP7-205ENST00000519503 RICTORQ6R327 1708 aa35.42■■■■□ 3.26
CHMP7-205ENST00000519503 DENND4BO75064 1496 aaPredicted RBP35.41■■■■□ 3.26
CHMP7-205ENST00000519503 LRRIQ1Q96JM4 1722 aa35.38■■■■□ 3.25
CHMP7-205ENST00000519503 MYO5CQ9NQX4 1742 aa35.37■■■■□ 3.25
CHMP7-205ENST00000519503 KIF14Q15058 1648 aa35.35■■■■□ 3.25
CHMP7-205ENST00000519503 PLCH2O75038 1416 aa35.34■■■■□ 3.25
CHMP7-205ENST00000519503 ARHGEF40Q8TER5 1519 aa35.33■■■■□ 3.25
CHMP7-205ENST00000519503 TROQ12816 1431 aaPredicted RBP35.32■■■■□ 3.25
CHMP7-205ENST00000519503 CASKIN1Q8WXD9 1431 aa35.32■■■■□ 3.24
CHMP7-205ENST00000519503 PCF11O94913 1555 aaKnown RBP35.31■■■■□ 3.24
CHMP7-205ENST00000519503 CLIP1P30622 1438 aa35.31■■■■□ 3.24
CHMP7-205ENST00000519503 ZMYM4Q5VZL5 1548 aa35.3■■■■□ 3.24
CHMP7-205ENST00000519503 CCDC18Q5T9S5 1454 aa35.29■■■■□ 3.24
CHMP7-205ENST00000519503 ADAMTSL3P82987 1691 aa35.25■■■■□ 3.23
CHMP7-205ENST00000519503 BCORL1Q5H9F3 1711 aa35.23■■■■□ 3.23
CHMP7-205ENST00000519503 FYCO1Q9BQS8 1478 aa35.22■■■■□ 3.23
CHMP7-205ENST00000519503 MAGI2Q86UL8 1455 aa35.22■■■■□ 3.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms