RNA–Protein interactions for RNA: ENST00000519486.5

SLIT3-205, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 4,228 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-205ENST00000519486 STAG3Q9UJ98 1225 aa11.06□□□□□ -0.64
SLIT3-205ENST00000519486 SLC24A1O60721 1099 aa11.04□□□□□ -0.64
SLIT3-205ENST00000519486 LAMC3Q9Y6N6 1575 aa11.03□□□□□ -0.64
SLIT3-205ENST00000519486 IFT140Q96RY7 1462 aa11.03□□□□□ -0.64
SLIT3-205ENST00000519486 ZNF777Q9ULD5 760 aaPredicted RBP11.03□□□□□ -0.64
SLIT3-205ENST00000519486 NESP48681 1621 aa11.02□□□□□ -0.65
SLIT3-205ENST00000519486 PRKCSHP14314 528 aaPredicted RBP11.01□□□□□ -0.65
SLIT3-205ENST00000519486 FAM69CQ0P6D2 419 aa11.01□□□□□ -0.65
SLIT3-205ENST00000519486 MIER1Q8N108 512 aa11.01□□□□□ -0.65
SLIT3-205ENST00000519486 JPH4Q96JJ6 628 aa11□□□□□ -0.65
SLIT3-205ENST00000519486 TOP2AP11388 1531 aaKnown RBP11□□□□□ -0.65
SLIT3-205ENST00000519486 CLSPNQ9HAW4 1339 aa11□□□□□ -0.65
SLIT3-205ENST00000519486 RUSC2Q8N2Y8 1516 aa10.99□□□□□ -0.65
SLIT3-205ENST00000519486 TSPY4P0CV99 314 aa10.91□□□□□ -0.66
SLIT3-205ENST00000519486 TSPY10P0CW01 314 aa10.91□□□□□ -0.66
SLIT3-205ENST00000519486 CARMIL1Q5VZK9 1371 aa10.91□□□□□ -0.66
SLIT3-205ENST00000519486 CNGB1Q14028 1251 aaPredicted RBP10.91□□□□□ -0.66
SLIT3-205ENST00000519486 GRIN2BQ13224 1484 aa10.9□□□□□ -0.66
SLIT3-205ENST00000519486 CFTRP13569 1480 aa10.9□□□□□ -0.66
SLIT3-205ENST00000519486 PTPRGP23470 1445 aa10.89□□□□□ -0.67
SLIT3-205ENST00000519486 TRIM52Q96A61 297 aa10.88□□□□□ -0.67
SLIT3-205ENST00000519486 MLECQ14165 292 aa10.87□□□□□ -0.67
SLIT3-205ENST00000519486 POLR3GLQ9BT43 218 aa10.87□□□□□ -0.67
SLIT3-205ENST00000519486 GAPVD1Q14C86 1478 aa10.87□□□□□ -0.67
SLIT3-205ENST00000519486 KANK4Q5T7N3 995 aaPredicted RBP10.86□□□□□ -0.67
SLIT3-205ENST00000519486 VPS8Q8N3P4 1428 aa10.86□□□□□ -0.67
SLIT3-205ENST00000519486 AQRO60306 1485 aaKnown RBP eCLIP10.86□□□□□ -0.67
SLIT3-205ENST00000519486 DDX10Q13206 875 aaKnown RBP10.85□□□□□ -0.67
SLIT3-205ENST00000519486 UNC13AQ9UPW8 1703 aa10.84□□□□□ -0.67
SLIT3-205ENST00000519486 C14orf37Q86TY3 774 aa10.84□□□□□ -0.67
SLIT3-205ENST00000519486 HIRIP3Q9BW71 556 aaPredicted RBP10.84□□□□□ -0.67
SLIT3-205ENST00000519486 RAPGEF2Q9Y4G8 1499 aa10.83□□□□□ -0.68
SLIT3-205ENST00000519486 RTL5Q5HYW3 569 aaPredicted RBP10.82□□□□□ -0.68
SLIT3-205ENST00000519486 EFCAB2Q5VUJ9 269 aa10.82□□□□□ -0.68
SLIT3-205ENST00000519486 ANP32CO43423 234 aa10.81□□□□□ -0.68
SLIT3-205ENST00000519486 PPP1R15AO75807 674 aaPredicted RBP10.81□□□□□ -0.68
SLIT3-205ENST00000519486 CHGAP10645 457 aaKnown RBP10.81□□□□□ -0.68
SLIT3-205ENST00000519486 SUPT16HQ9Y5B9 1047 aaKnown RBP10.79□□□□□ -0.68
SLIT3-205ENST00000519486 MTUS2Q5JR59 1369 aa10.79□□□□□ -0.68
SLIT3-205ENST00000519486 FGD5Q6ZNL6 1462 aa10.79□□□□□ -0.68
SLIT3-205ENST00000519486 TSHZ2Q9NRE2 1034 aa10.79□□□□□ -0.68
SLIT3-205ENST00000519486 FHAD1B1AJZ9 1412 aa10.78□□□□□ -0.68
SLIT3-205ENST00000519486 TOPBP1Q92547 1522 aa10.77□□□□□ -0.68
SLIT3-205ENST00000519486 HDGFP51858 240 aaKnown RBP10.77□□□□□ -0.69
SLIT3-205ENST00000519486 CHIC2Q9UKJ5 165 aa10.76□□□□□ -0.69
SLIT3-205ENST00000519486 SIN3AQ96ST3 1273 aa10.76□□□□□ -0.69
SLIT3-205ENST00000519486 CCNB3Q8WWL7 1395 aa10.75□□□□□ -0.69
SLIT3-205ENST00000519486 CFDP1Q9UEE9 299 aaPredicted RBP10.75□□□□□ -0.69
SLIT3-205ENST00000519486 RAD54L2Q9Y4B4 1467 aa10.74□□□□□ -0.69
SLIT3-205ENST00000519486 TONSLQ96HA7 1378 aa10.74□□□□□ -0.69
SLIT3-205ENST00000519486 SYNJ1O43426 1573 aa10.74□□□□□ -0.69
SLIT3-205ENST00000519486 SNAPC4Q5SXM2 1469 aa10.73□□□□□ -0.69
SLIT3-205ENST00000519486 FKBP8Q14318 412 aa10.73□□□□□ -0.69
SLIT3-205ENST00000519486 ZNF326Q5BKZ1 582 aaKnown RBP10.73□□□□□ -0.69
SLIT3-205ENST00000519486 PRG4Q92954 1404 aaPredicted RBP10.73□□□□□ -0.69
SLIT3-205ENST00000519486 EIF5BO60841 1220 aaKnown RBP10.72□□□□□ -0.69
SLIT3-205ENST00000519486 MAGI1Q96QZ7 1491 aaPredicted RBP10.72□□□□□ -0.69
SLIT3-205ENST00000519486 DNMBPQ6XZF7 1577 aa10.71□□□□□ -0.7
SLIT3-205ENST00000519486 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.69□□□□□ -0.7
SLIT3-205ENST00000519486 POGZQ7Z3K3 1410 aa10.69□□□□□ -0.7
SLIT3-205ENST00000519486 SYNJ2O15056 1496 aa10.69□□□□□ -0.7
SLIT3-205ENST00000519486 RRP7BPQ9NSQ0 103 aa10.68□□□□□ -0.7
SLIT3-205ENST00000519486 HAP1P54257 671 aaPredicted RBP10.68□□□□□ -0.7
SLIT3-205ENST00000519486 POLA1P09884 1462 aaPredicted RBP10.67□□□□□ -0.7
SLIT3-205ENST00000519486 SLC4A1APQ9BWU0 796 aaKnown RBP10.67□□□□□ -0.7
SLIT3-205ENST00000519486 DMRT2Q9Y5R5 561 aa10.65□□□□□ -0.7
SLIT3-205ENST00000519486 DHX57Q6P158 1386 aaKnown RBP10.65□□□□□ -0.7
SLIT3-205ENST00000519486 RBM19Q9Y4C8 960 aaKnown RBP10.64□□□□□ -0.71
SLIT3-205ENST00000519486 RAB3GAP2Q9H2M9 1393 aa10.64□□□□□ -0.71
SLIT3-205ENST00000519486 HNRNPUQ00839 825 aaKnown RBP eCLIP10.64□□□□□ -0.71
SLIT3-205ENST00000519486 DEKP35659 375 aaKnown RBP10.64□□□□□ -0.71
SLIT3-205ENST00000519486 PEG3Q9GZU2 1588 aa10.64□□□□□ -0.71
SLIT3-205ENST00000519486 FOXD1Q16676 465 aa10.63□□□□□ -0.71
SLIT3-205ENST00000519486 GGT6Q6P531 493 aa10.63□□□□□ -0.71
SLIT3-205ENST00000519486 PHF23Q9BUL5 403 aaPredicted RBP10.63□□□□□ -0.71
SLIT3-205ENST00000519486 EID1Q9Y6B2 187 aa10.63□□□□□ -0.71
SLIT3-205ENST00000519486 KANK1Q14678 1352 aa10.63□□□□□ -0.71
SLIT3-205ENST00000519486 KIF21BO75037 1637 aa10.62□□□□□ -0.71
SLIT3-205ENST00000519486 NBR1Q14596 966 aa10.61□□□□□ -0.71
SLIT3-205ENST00000519486 SETD5Q9C0A6 1442 aa10.6□□□□□ -0.71
SLIT3-205ENST00000519486 URB2Q14146 1524 aaKnown RBP10.6□□□□□ -0.71
SLIT3-205ENST00000519486 FAM9BQ8IZU0 186 aa10.59□□□□□ -0.71
SLIT3-205ENST00000519486 GLIPR1L2Q4G1C9 344 aa10.59□□□□□ -0.71
SLIT3-205ENST00000519486 FMN1Q68DA7 1419 aa10.58□□□□□ -0.72
SLIT3-205ENST00000519486 WDR62O43379 1518 aa10.58□□□□□ -0.72
SLIT3-205ENST00000519486 SPAG9O60271 1321 aaKnown RBP10.58□□□□□ -0.72
SLIT3-205ENST00000519486 IRX6P78412 446 aaPredicted RBP10.57□□□□□ -0.72
SLIT3-205ENST00000519486 IGF1RP08069 1367 aa10.57□□□□□ -0.72
SLIT3-205ENST00000519486 RSPH4AQ5TD94 716 aa10.57□□□□□ -0.72
SLIT3-205ENST00000519486 ANO8Q9HCE9 1232 aaPredicted RBP10.57□□□□□ -0.72
SLIT3-205ENST00000519486 ZNF608Q9ULD9 1512 aaPredicted RBP10.56□□□□□ -0.72
SLIT3-205ENST00000519486 FHOD3Q2V2M9 1422 aa10.56□□□□□ -0.72
SLIT3-205ENST00000519486 ARAP1Q96P48 1450 aa10.56□□□□□ -0.72
SLIT3-205ENST00000519486 SENP3Q9H4L4 574 aaPredicted RBP10.56□□□□□ -0.72
SLIT3-205ENST00000519486 TEX14Q8IWB6 1497 aa10.55□□□□□ -0.72
SLIT3-205ENST00000519486 ERICH6BQ5W0A0 696 aa10.54□□□□□ -0.72
SLIT3-205ENST00000519486 EIF4G2P78344 907 aaKnown RBP eCLIP10.54□□□□□ -0.72
SLIT3-205ENST00000519486 PLB1Q6P1J6 1458 aa10.54□□□□□ -0.72
SLIT3-205ENST00000519486 RTN4Q9NQC3 1192 aaKnown RBP10.53□□□□□ -0.72
SLIT3-205ENST00000519486 GRIN2AQ12879 1464 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms