RNA–Protein interactions for RNA: ENST00000518678.1

TRAM1-202, Transcript of translocation associated membrane protein 1, humanhuman

TSL 4

Gene TRAM1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-202ENST00000518678 CEP170Q5SW79 1584 aa29.39■■■□□ 2.29
TRAM1-202ENST00000518678 PRXQ9BXM0 1461 aa29.37■■■□□ 2.29
TRAM1-202ENST00000518678 RAPGEF2Q9Y4G8 1499 aa29.35■■■□□ 2.29
TRAM1-202ENST00000518678 ERCC6L2Q5T890 1561 aa29.35■■■□□ 2.29
TRAM1-202ENST00000518678 NUP160Q12769 1436 aa29.28■■■□□ 2.28
TRAM1-202ENST00000518678 KIF21BO75037 1637 aa29.24■■■□□ 2.27
TRAM1-202ENST00000518678 SHROOM2Q13796 1616 aa29.18■■■□□ 2.26
TRAM1-202ENST00000518678 TRHP20396 242 aaPredicted RBP29.11■■■□□ 2.25
TRAM1-202ENST00000518678 KIAA0586Q9BVV6 1533 aa29.1■■■□□ 2.25
TRAM1-202ENST00000518678 GOLGA3Q08378 1498 aa29.1■■■□□ 2.25
TRAM1-202ENST00000518678 CTTNBP2Q8WZ74 1663 aa29.06■■■□□ 2.24
TRAM1-202ENST00000518678 IQGAP2Q13576 1575 aa29.02■■■□□ 2.24
TRAM1-202ENST00000518678 EHMT2Q96KQ7 1210 aa28.99■■■□□ 2.23
TRAM1-202ENST00000518678 PRG4Q92954 1404 aaPredicted RBP28.99■■■□□ 2.23
TRAM1-202ENST00000518678 JPH4Q96JJ6 628 aa28.95■■■□□ 2.22
TRAM1-202ENST00000518678 UBTFP17480 764 aaKnown RBP28.94■■■□□ 2.22
TRAM1-202ENST00000518678 UGGT2Q9NYU1 1516 aa28.89■■■□□ 2.21
TRAM1-202ENST00000518678 TNIKQ9UKE5 1360 aa28.81■■■□□ 2.2
TRAM1-202ENST00000518678 LOC105371045A0A1W2PR82 267 aa28.81■■■□□ 2.2
TRAM1-202ENST00000518678 DISP1Q96F81 1524 aa28.78■■■□□ 2.2
TRAM1-202ENST00000518678 CARMIL2Q6F5E8 1435 aa28.77■■■□□ 2.2
TRAM1-202ENST00000518678 KIAA0556O60303 1618 aa28.73■■■□□ 2.19
TRAM1-202ENST00000518678 ADCY10Q96PN6 1610 aa28.72■■■□□ 2.19
TRAM1-202ENST00000518678 SAMD9Q5K651 1589 aa28.71■■■□□ 2.19
TRAM1-202ENST00000518678 KIF13AQ9H1H9 1805 aa28.71■■■□□ 2.19
TRAM1-202ENST00000518678 RANGAP1P46060 587 aaPredicted RBP28.69■■■□□ 2.18
TRAM1-202ENST00000518678 EFCAB5A4FU69 1503 aa28.68■■■□□ 2.18
TRAM1-202ENST00000518678 TTBK1Q5TCY1 1321 aaPredicted RBP28.64■■■□□ 2.17
TRAM1-202ENST00000518678 ARHGAP35Q9NRY4 1499 aa28.59■■■□□ 2.17
TRAM1-202ENST00000518678 P3H3Q8IVL6 736 aa28.59■■■□□ 2.17
TRAM1-202ENST00000518678 PTPRGP23470 1445 aa28.58■■■□□ 2.17
TRAM1-202ENST00000518678 CLIP1P30622 1438 aa28.58■■■□□ 2.17
TRAM1-202ENST00000518678 CEP162Q5TB80 1403 aa28.57■■■□□ 2.16
TRAM1-202ENST00000518678 FHOD3Q2V2M9 1422 aa28.54■■■□□ 2.16
TRAM1-202ENST00000518678 MAPKBP1O60336 1514 aa28.5■■■□□ 2.15
TRAM1-202ENST00000518678 DIP2BQ9P265 1576 aa28.49■■■□□ 2.15
TRAM1-202ENST00000518678 ABCC10Q5T3U5 1492 aa28.45■■■□□ 2.14
TRAM1-202ENST00000518678 NPM1P06748 294 aaKnown RBP eCLIP28.43■■■□□ 2.14
TRAM1-202ENST00000518678 FAM69CQ0P6D2 419 aa28.41■■■□□ 2.14
TRAM1-202ENST00000518678 UACAQ9BZF9 1416 aa28.41■■■□□ 2.14
TRAM1-202ENST00000518678 ABCA8O94911 1581 aa28.39■■■□□ 2.14
TRAM1-202ENST00000518678 FMN1Q68DA7 1419 aa28.39■■■□□ 2.14
TRAM1-202ENST00000518678 PLB1Q6P1J6 1458 aa28.39■■■□□ 2.13
TRAM1-202ENST00000518678 TSPOAP1O95153 1857 aa28.38■■■□□ 2.13
TRAM1-202ENST00000518678 UHRF1BP1LA0JNW5 1464 aa28.38■■■□□ 2.13
TRAM1-202ENST00000518678 ABCC2Q92887 1545 aa28.36■■■□□ 2.13
TRAM1-202ENST00000518678 RAPGEF6Q8TEU7 1601 aa28.33■■■□□ 2.13
TRAM1-202ENST00000518678 ZCCHC11Q5TAX3 1644 aaKnown RBP28.27■■■□□ 2.12
TRAM1-202ENST00000518678 ASXL2Q76L83 1435 aa28.26■■■□□ 2.12
TRAM1-202ENST00000518678 NUP153P49790 1475 aaKnown RBP28.23■■■□□ 2.11
TRAM1-202ENST00000518678 CASKIN1Q8WXD9 1431 aa28.23■■■□□ 2.11
TRAM1-202ENST00000518678 PCF11O94913 1555 aaKnown RBP28.23■■■□□ 2.11
TRAM1-202ENST00000518678 KDM5BQ9UGL1 1544 aa28.23■■■□□ 2.11
TRAM1-202ENST00000518678 HECW1Q76N89 1606 aa28.21■■■□□ 2.11
TRAM1-202ENST00000518678 PPRC1Q5VV67 1664 aaKnown RBP28.21■■■□□ 2.11
TRAM1-202ENST00000518678 VPS8Q8N3P4 1428 aa28.2■■■□□ 2.11
TRAM1-202ENST00000518678 FYCO1Q9BQS8 1478 aa28.19■■■□□ 2.1
TRAM1-202ENST00000518678 ATP10BO94823 1461 aa28.15■■■□□ 2.1
TRAM1-202ENST00000518678 ATP1B4Q9UN42 357 aaPredicted RBP28.14■■■□□ 2.1
TRAM1-202ENST00000518678 KDM6BO15054 1643 aa28.13■■■□□ 2.09
TRAM1-202ENST00000518678 GLI2P10070 1586 aa28.12■■■□□ 2.09
TRAM1-202ENST00000518678 ARID3CA6NKF2 412 aa28.11■■■□□ 2.09
TRAM1-202ENST00000518678 EPRSP07814 1512 aaKnown RBP28.11■■■□□ 2.09
TRAM1-202ENST00000518678 LRRIQ1Q96JM4 1722 aa28.1■■■□□ 2.09
TRAM1-202ENST00000518678 CDK13Q14004 1512 aaKnown RBP28.08■■■□□ 2.08
TRAM1-202ENST00000518678 MAP3K4Q9Y6R4 1608 aa28.07■■■□□ 2.08
TRAM1-202ENST00000518678 CCDC18Q5T9S5 1454 aa28.06■■■□□ 2.08
TRAM1-202ENST00000518678 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.03■■■□□ 2.08
TRAM1-202ENST00000518678 HNRNPUL2Q1KMD3 747 aaKnown RBP28.03■■■□□ 2.08
TRAM1-202ENST00000518678 WDR7Q9Y4E6 1490 aa28.01■■■□□ 2.07
TRAM1-202ENST00000518678 AEBP2Q6ZN18 517 aaPredicted RBP27.95■■■□□ 2.06
TRAM1-202ENST00000518678 COL17A1Q9UMD9 1497 aaPredicted RBP27.95■■■□□ 2.06
TRAM1-202ENST00000518678 PLEKHD1A6NEE1 506 aa27.94■■■□□ 2.06
TRAM1-202ENST00000518678 CFAP43Q8NDM7 1665 aa27.94■■■□□ 2.06
TRAM1-202ENST00000518678 CDK11AQ9UQ88 783 aaPredicted RBP27.93■■■□□ 2.06
TRAM1-202ENST00000518678 TIAM1Q13009 1591 aa27.91■■■□□ 2.06
TRAM1-202ENST00000518678 KCNH8Q96L42 1107 aa27.91■■■□□ 2.06
TRAM1-202ENST00000518678 MAP3K1Q13233 1512 aa27.91■■■□□ 2.06
TRAM1-202ENST00000518678 MAGI3Q5TCQ9 1506 aa27.87■■■□□ 2.05
TRAM1-202ENST00000518678 TROQ12816 1431 aaPredicted RBP27.86■■■□□ 2.05
TRAM1-202ENST00000518678 APLP2Q06481 763 aa27.84■■■□□ 2.05
TRAM1-202ENST00000518678 MTUS2Q5JR59 1369 aa27.8■■■□□ 2.04
TRAM1-202ENST00000518678 EHBP1L1Q8N3D4 1523 aa27.8■■■□□ 2.04
TRAM1-202ENST00000518678 TEX14Q8IWB6 1497 aa27.79■■■□□ 2.04
TRAM1-202ENST00000518678 CD109Q6YHK3 1445 aa27.79■■■□□ 2.04
TRAM1-202ENST00000518678 LRRC9Q6ZRR7 1453 aa27.78■■■□□ 2.04
TRAM1-202ENST00000518678 KIF14Q15058 1648 aa27.77■■■□□ 2.04
TRAM1-202ENST00000518678 KDM4FA0A1W2PPD8 638 aa27.76■■■□□ 2.03
TRAM1-202ENST00000518678 ABCA9Q8IUA7 1624 aa27.75■■■□□ 2.03
TRAM1-202ENST00000518678 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.74■■■□□ 2.03
TRAM1-202ENST00000518678 KANK4Q5T7N3 995 aaPredicted RBP27.74■■■□□ 2.03
TRAM1-202ENST00000518678 TTC37Q6PGP7 1564 aa27.7■■■□□ 2.03
TRAM1-202ENST00000518678 SUPT6HQ7KZ85 1726 aaKnown RBP27.67■■■□□ 2.02
TRAM1-202ENST00000518678 NCOA2Q15596 1464 aa27.62■■■□□ 2.01
TRAM1-202ENST00000518678 MYO5CQ9NQX4 1742 aa27.6■■■□□ 2.01
TRAM1-202ENST00000518678 ADGRL1O94910 1474 aa27.59■■■□□ 2.01
TRAM1-202ENST00000518678 PLCH2O75038 1416 aa27.57■■■□□ 2
TRAM1-202ENST00000518678 CDC42BPAQ5VT25 1732 aa27.56■■■□□ 2
TRAM1-202ENST00000518678 CCNB3Q8WWL7 1395 aa27.55■■■□□ 2
TRAM1-202ENST00000518678 ARAP3Q8WWN8 1544 aa27.55■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms