RNA–Protein interactions for RNA: ENST00000518376.1

CASC11-202, Transcript of cancer susceptibility 11, humanhuman

TSL 3

Gene CASC11, Length 872 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC11-202ENST00000518376 BAZ1AQ9NRL2 1556 aaPredicted RBP15.29■□□□□ 0.04
CASC11-202ENST00000518376 RTN4Q9NQC3 1192 aaKnown RBP15.29■□□□□ 0.04
CASC11-202ENST00000518376 EIF4G1Q04637 1599 aaKnown RBP15.27■□□□□ 0.03
CASC11-202ENST00000518376 SMARCA4P51532 1647 aa15.26■□□□□ 0.03
CASC11-202ENST00000518376 SPOCK2Q92563 424 aa15.26■□□□□ 0.03
CASC11-202ENST00000518376 CC2D2AQ9P2K1 1620 aa15.23■□□□□ 0.03
CASC11-202ENST00000518376 ZBTB47Q9UFB7 747 aaPredicted RBP15.22■□□□□ 0.03
CASC11-202ENST00000518376 FARP1Q9Y4F1 1045 aaPredicted RBP15.22■□□□□ 0.03
CASC11-202ENST00000518376 AMER1Q5JTC6 1135 aaPredicted RBP15.19■□□□□ 0.02
CASC11-202ENST00000518376 NUBP1P53384 320 aa15.18■□□□□ 0.02
CASC11-202ENST00000518376 WIZO95785 1651 aa15.16■□□□□ 0.02
CASC11-202ENST00000518376 RASEFQ8IZ41 740 aa15.11■□□□□ 0.01
CASC11-202ENST00000518376 NPM1P06748 294 aaKnown RBP eCLIP15.1■□□□□ 0.01
CASC11-202ENST00000518376 PEG3Q9GZU2 1588 aa15.08■□□□□ 0
CASC11-202ENST00000518376 PKD2Q13563 968 aa15.08■□□□□ 0
CASC11-202ENST00000518376 TOP2AP11388 1531 aaKnown RBP15.02■□□□□ -0
CASC11-202ENST00000518376 ATAD2BQ9ULI0 1458 aa15.02■□□□□ -0
CASC11-202ENST00000518376 CIZ1Q9ULV3 898 aaPredicted RBP15.02■□□□□ -0
CASC11-202ENST00000518376 SMARCA2P51531 1590 aa15.01□□□□□ -0.01
CASC11-202ENST00000518376 DCAF8Q5TAQ9 597 aa14.99□□□□□ -0.01
CASC11-202ENST00000518376 TSPYL2Q9H2G4 693 aaPredicted RBP14.97□□□□□ -0.01
CASC11-202ENST00000518376 FAM212AQ96EL1 285 aa14.96□□□□□ -0.01
CASC11-202ENST00000518376 GSE1Q14687 1217 aa14.93□□□□□ -0.02
CASC11-202ENST00000518376 BAZ1BQ9UIG0 1483 aaKnown RBP14.93□□□□□ -0.02
CASC11-202ENST00000518376 NCAPD3P42695 1498 aa14.91□□□□□ -0.02
CASC11-202ENST00000518376 POTEHQ6S545 545 aa14.91□□□□□ -0.02
CASC11-202ENST00000518376 HMGXB3Q12766 1538 aa14.9□□□□□ -0.02
CASC11-202ENST00000518376 ECM2O94769 699 aaPredicted RBP14.89□□□□□ -0.03
CASC11-202ENST00000518376 C19orf67A6NJJ6 358 aa14.88□□□□□ -0.03
CASC11-202ENST00000518376 CD44P16070 742 aaKnown RBP14.88□□□□□ -0.03
CASC11-202ENST00000518376 CCDC61Q9Y6R9 512 aa14.85□□□□□ -0.03
CASC11-202ENST00000518376 CCDC88BA6NC98 1476 aa14.84□□□□□ -0.03
CASC11-202ENST00000518376 PYGBP11216 843 aa14.83□□□□□ -0.04
CASC11-202ENST00000518376 EVX2Q03828 476 aa14.83□□□□□ -0.04
CASC11-202ENST00000518376 ZRANB1Q9UGI0 708 aa14.82□□□□□ -0.04
CASC11-202ENST00000518376 RGL2O15211 777 aa14.81□□□□□ -0.04
CASC11-202ENST00000518376 HAX1O00165 279 aa14.8□□□□□ -0.04
CASC11-202ENST00000518376 PAK3O75914 559 aaPredicted RBP14.79□□□□□ -0.04
CASC11-202ENST00000518376 RNF25Q96BH1 459 aaPredicted RBP14.78□□□□□ -0.04
CASC11-202ENST00000518376 TRIM41Q8WV44 630 aa14.77□□□□□ -0.05
CASC11-202ENST00000518376 CHRM1P11229 460 aaPredicted RBP14.75□□□□□ -0.05
CASC11-202ENST00000518376 PHF12Q96QT6 1004 aa14.75□□□□□ -0.05
CASC11-202ENST00000518376 KIF12Q96FN5 646 aa14.7□□□□□ -0.06
CASC11-202ENST00000518376 ZNF579Q8NAF0 562 aaKnown RBP14.69□□□□□ -0.06
CASC11-202ENST00000518376 MAP3K13O43283 966 aa14.68□□□□□ -0.06
CASC11-202ENST00000518376 PCDHB8Q9UN66 801 aa14.63□□□□□ -0.07
CASC11-202ENST00000518376 PCDHB13Q9Y5F0 798 aa14.63□□□□□ -0.07
CASC11-202ENST00000518376 RIOK3O14730 519 aaKnown RBP14.62□□□□□ -0.07
CASC11-202ENST00000518376 IFNL1Q8IU54 200 aa14.6□□□□□ -0.07
CASC11-202ENST00000518376 MS4A3Q96HJ5 214 aa14.57□□□□□ -0.08
CASC11-202ENST00000518376 CFTRP13569 1480 aa14.55□□□□□ -0.08
CASC11-202ENST00000518376 ZNF467Q7Z7K2 595 aaPredicted RBP14.54□□□□□ -0.08
CASC11-202ENST00000518376 SGIP1Q9BQI5 828 aa14.54□□□□□ -0.08
CASC11-202ENST00000518376 ERCC6Q03468 1493 aa14.54□□□□□ -0.08
CASC11-202ENST00000518376 TRPC6Q9Y210 931 aa14.53□□□□□ -0.08
CASC11-202ENST00000518376 CUX2O14529 1486 aa14.52□□□□□ -0.08
CASC11-202ENST00000518376 GALR2O43603 387 aaPredicted RBP14.52□□□□□ -0.09
CASC11-202ENST00000518376 VGFO15240 615 aaPredicted RBP14.51□□□□□ -0.09
CASC11-202ENST00000518376 CADPSQ9ULU8 1353 aa14.5□□□□□ -0.09
CASC11-202ENST00000518376 ABCC8Q09428 1581 aa14.5□□□□□ -0.09
CASC11-202ENST00000518376 LAMC3Q9Y6N6 1575 aa14.5□□□□□ -0.09
CASC11-202ENST00000518376 NESP48681 1621 aa14.49□□□□□ -0.09
CASC11-202ENST00000518376 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.49□□□□□ -0.09
CASC11-202ENST00000518376 ZFP91Q96JP5 570 aaPredicted RBP14.49□□□□□ -0.09
CASC11-202ENST00000518376 CHGAP10645 457 aaKnown RBP14.48□□□□□ -0.09
CASC11-202ENST00000518376 PRDM2Q13029 1718 aa14.48□□□□□ -0.09
CASC11-202ENST00000518376 GABBR2O75899 941 aa14.45□□□□□ -0.1
CASC11-202ENST00000518376 PSEN1P49768 467 aa14.45□□□□□ -0.1
CASC11-202ENST00000518376 PDAP1Q13442 181 aaKnown RBP14.45□□□□□ -0.1
CASC11-202ENST00000518376 HS6ST3Q8IZP7 471 aa14.43□□□□□ -0.1
CASC11-202ENST00000518376 STK25O00506 426 aa14.42□□□□□ -0.1
CASC11-202ENST00000518376 BCL11BQ9C0K0 894 aaPredicted RBP14.41□□□□□ -0.1
CASC11-202ENST00000518376 WRNQ14191 1432 aaPredicted RBP eCLIP14.41□□□□□ -0.1
CASC11-202ENST00000518376 PDS5BQ9NTI5 1447 aa14.41□□□□□ -0.1
CASC11-202ENST00000518376 TAOK2Q9UL54 1235 aa14.4□□□□□ -0.1
CASC11-202ENST00000518376 SP7Q8TDD2 431 aaPredicted RBP14.39□□□□□ -0.11
CASC11-202ENST00000518376 SYNJ1O43426 1573 aa14.39□□□□□ -0.11
CASC11-202ENST00000518376 STK24Q9Y6E0 443 aa14.38□□□□□ -0.11
CASC11-202ENST00000518376 THOC2Q8NI27 1593 aaKnown RBP14.37□□□□□ -0.11
CASC11-202ENST00000518376 CLCN6P51797 869 aa14.36□□□□□ -0.11
CASC11-202ENST00000518376 FANCD2Q9BXW9 1451 aa14.36□□□□□ -0.11
CASC11-202ENST00000518376 TMEM106CQ9BVX2 250 aa14.34□□□□□ -0.11
CASC11-202ENST00000518376 BMP2KQ9NSY1 1161 aaPredicted RBP14.34□□□□□ -0.11
CASC11-202ENST00000518376 TOP2BQ02880 1626 aa14.33□□□□□ -0.12
CASC11-202ENST00000518376 BIVM-ERCC5R4GMW8 1640 aa14.33□□□□□ -0.12
CASC11-202ENST00000518376 CUX1P39880 1505 aa14.32□□□□□ -0.12
CASC11-202ENST00000518376 TTLL13PA6NNM8 815 aa14.32□□□□□ -0.12
CASC11-202ENST00000518376 NKX1-1Q15270 411 aaPredicted RBP14.32□□□□□ -0.12
CASC11-202ENST00000518376 KIF21AQ7Z4S6 1674 aa14.32□□□□□ -0.12
CASC11-202ENST00000518376 TIE1P35590 1138 aa14.31□□□□□ -0.12
CASC11-202ENST00000518376 BBXQ8WY36 941 aaPredicted RBP14.31□□□□□ -0.12
CASC11-202ENST00000518376 DNAJC5Q9H3Z4 198 aa14.28□□□□□ -0.12
CASC11-202ENST00000518376 CABP2Q9NPB3 220 aa14.28□□□□□ -0.12
CASC11-202ENST00000518376 CEP164Q9UPV0 1460 aa14.27□□□□□ -0.12
CASC11-202ENST00000518376 MRC2Q9UBG0 1479 aa14.26□□□□□ -0.13
CASC11-202ENST00000518376 ATMINO43313 823 aaPredicted RBP14.25□□□□□ -0.13
CASC11-202ENST00000518376 ATN1P54259 1190 aaPredicted RBP14.25□□□□□ -0.13
CASC11-202ENST00000518376 EFCAB3Q8N7B9 438 aa14.24□□□□□ -0.13
CASC11-202ENST00000518376 WDR62O43379 1518 aa14.24□□□□□ -0.13
CASC11-202ENST00000518376 DNMBPQ6XZF7 1577 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms