RNA–Protein interactions for RNA: ENST00000518376.1

CASC11-202, Transcript of cancer susceptibility 11, humanhuman

TSL 3

Gene CASC11, Length 872 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC11-202ENST00000518376 AEBP2Q6ZN18 517 aaPredicted RBP28.93■■■□□ 2.22
CASC11-202ENST00000518376 CHIC1Q5VXU3 224 aa28.25■■■□□ 2.11
CASC11-202ENST00000518376 PHF23Q9BUL5 403 aaPredicted RBP24.96■■□□□ 1.59
CASC11-202ENST00000518376 SENP3Q9H4L4 574 aaPredicted RBP24.36■■□□□ 1.49
CASC11-202ENST00000518376 PLPPR3Q6T4P5 718 aa22.92■■□□□ 1.26
CASC11-202ENST00000518376 FOXD1Q16676 465 aa22.71■■□□□ 1.23
CASC11-202ENST00000518376 PPP6R1Q9UPN7 881 aa22■■□□□ 1.11
CASC11-202ENST00000518376 ADRA2BP18089 450 aa21.96■■□□□ 1.11
CASC11-202ENST00000518376 PIAS4Q8N2W9 510 aaPredicted RBP21.38■■□□□ 1.01
CASC11-202ENST00000518376 MSH5O43196 834 aa20.76■□□□□ 0.91
CASC11-202ENST00000518376 PPP4R3CPQ6ZMV5 832 aa20.27■□□□□ 0.84
CASC11-202ENST00000518376 KCNA4P22459 653 aa19.98■□□□□ 0.79
CASC11-202ENST00000518376 MAPK8IP2Q13387 824 aaPredicted RBP19.92■□□□□ 0.78
CASC11-202ENST00000518376 SCAF1Q9H7N4 1312 aaKnown RBP19.88■□□□□ 0.77
CASC11-202ENST00000518376 NISCHQ9Y2I1 1504 aa19.81■□□□□ 0.76
CASC11-202ENST00000518376 NCBP3Q53F19 620 aaKnown RBP19.65■□□□□ 0.74
CASC11-202ENST00000518376 CNKSR2Q8WXI2 1034 aa19.62■□□□□ 0.73
CASC11-202ENST00000518376 NPM3O75607 178 aaKnown RBP19.51■□□□□ 0.71
CASC11-202ENST00000518376 DMRT2Q9Y5R5 561 aa19.51■□□□□ 0.71
CASC11-202ENST00000518376 RNF216Q9NWF9 866 aaPredicted RBP19.22■□□□□ 0.67
CASC11-202ENST00000518376 HOXD11P31277 338 aaPredicted RBP19.14■□□□□ 0.65
CASC11-202ENST00000518376 SLC4A1APQ9BWU0 796 aaKnown RBP18.97■□□□□ 0.63
CASC11-202ENST00000518376 POTEDQ86YR6 584 aa18.84■□□□□ 0.61
CASC11-202ENST00000518376 DNAJC5BQ9UF47 199 aa18.83■□□□□ 0.6
CASC11-202ENST00000518376 DCAF8L1A6NGE4 600 aa18.65■□□□□ 0.58
CASC11-202ENST00000518376 EHMT2Q96KQ7 1210 aa18.62■□□□□ 0.57
CASC11-202ENST00000518376 ZBTB22O15209 634 aa18.45■□□□□ 0.54
CASC11-202ENST00000518376 SLC4A2P04920 1241 aa18.44■□□□□ 0.54
CASC11-202ENST00000518376 CSRNP3Q8WYN3 585 aa18.38■□□□□ 0.53
CASC11-202ENST00000518376 FOXD4L1Q9NU39 408 aa18.27■□□□□ 0.52
CASC11-202ENST00000518376 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.21■□□□□ 0.51
CASC11-202ENST00000518376 U3KPZ7 1027 aaPredicted RBP18.01■□□□□ 0.47
CASC11-202ENST00000518376 MYCNP04198 464 aaPredicted RBP17.94■□□□□ 0.46
CASC11-202ENST00000518376 RNF39Q9H2S5 420 aa17.88■□□□□ 0.45
CASC11-202ENST00000518376 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.64■□□□□ 0.41
CASC11-202ENST00000518376 HNRNPUL2Q1KMD3 747 aaKnown RBP17.64■□□□□ 0.41
CASC11-202ENST00000518376 SAMD1Q6SPF0 538 aaPredicted RBP17.63■□□□□ 0.41
CASC11-202ENST00000518376 C1QBPQ07021 282 aaKnown RBP17.61■□□□□ 0.41
CASC11-202ENST00000518376 ATF5Q9Y2D1 282 aaPredicted RBP17.61■□□□□ 0.41
CASC11-202ENST00000518376 ATXN8OSP0DMR3 200 aa17.56■□□□□ 0.4
CASC11-202ENST00000518376 SPINK5Q9NQ38 1064 aaPredicted RBP17.51■□□□□ 0.39
CASC11-202ENST00000518376 APLP2Q06481 763 aa17.38■□□□□ 0.37
CASC11-202ENST00000518376 CAPN15O75808 1086 aa17.34■□□□□ 0.37
CASC11-202ENST00000518376 CCDC180Q9P1Z9 1646 aa17.34■□□□□ 0.37
CASC11-202ENST00000518376 TRHP20396 242 aaPredicted RBP17.31■□□□□ 0.36
CASC11-202ENST00000518376 CACNB1Q02641 598 aaPredicted RBP17.31■□□□□ 0.36
CASC11-202ENST00000518376 ZNF219Q9P2Y4 722 aaPredicted RBP17.22■□□□□ 0.35
CASC11-202ENST00000518376 ABCB7O75027 752 aa17.09■□□□□ 0.33
CASC11-202ENST00000518376 DSG3P32926 999 aa17.07■□□□□ 0.32
CASC11-202ENST00000518376 POLA2Q14181 598 aa17.06■□□□□ 0.32
CASC11-202ENST00000518376 MKRN4PQ13434 485 aaPredicted RBP16.83■□□□□ 0.28
CASC11-202ENST00000518376 ABCC9O60706 1549 aa16.81■□□□□ 0.28
CASC11-202ENST00000518376 FBLN2P98095 1184 aa16.67■□□□□ 0.26
CASC11-202ENST00000518376 ZBTB12Q9Y330 459 aaPredicted RBP16.64■□□□□ 0.25
CASC11-202ENST00000518376 ZCCHC6Q5VYS8 1495 aaKnown RBP16.63■□□□□ 0.25
CASC11-202ENST00000518376 FKBP8Q14318 412 aa16.56■□□□□ 0.24
CASC11-202ENST00000518376 OSCARQ8IYS5 282 aa16.5■□□□□ 0.23
CASC11-202ENST00000518376 SPDYE4A6NLX3 237 aa16.41■□□□□ 0.22
CASC11-202ENST00000518376 DCAF1Q9Y4B6 1507 aa16.39■□□□□ 0.21
CASC11-202ENST00000518376 DCAF8L2P0C7V8 631 aa16.29■□□□□ 0.2
CASC11-202ENST00000518376 SPDYE2BA6NHP3 402 aa16.27■□□□□ 0.2
CASC11-202ENST00000518376 SPDYE6P0CI01 402 aa16.27■□□□□ 0.2
CASC11-202ENST00000518376 SPDYE2Q495Y8 402 aa16.27■□□□□ 0.2
CASC11-202ENST00000518376 ZNF692Q9BU19 519 aaPredicted RBP16.26■□□□□ 0.19
CASC11-202ENST00000518376 MYO15BQ96JP2 1530 aa16.24■□□□□ 0.19
CASC11-202ENST00000518376 SSUH2Q9Y2M2 353 aa16.22■□□□□ 0.19
CASC11-202ENST00000518376 PROM2Q8N271 834 aa16.19■□□□□ 0.18
CASC11-202ENST00000518376 RB1CC1Q8TDY2 1594 aa16.17■□□□□ 0.18
CASC11-202ENST00000518376 NACADO15069 1562 aa16.16■□□□□ 0.18
CASC11-202ENST00000518376 RBM42Q9BTD8 480 aaKnown RBP16.13■□□□□ 0.17
CASC11-202ENST00000518376 PABPN1Q86U42 306 aaKnown RBP eCLIP16.08■□□□□ 0.16
CASC11-202ENST00000518376 SHROOM4Q9ULL8 1493 aa16.03■□□□□ 0.16
CASC11-202ENST00000518376 AKT1S1Q96B36 256 aa16.01■□□□□ 0.15
CASC11-202ENST00000518376 REM2Q8IYK8 340 aaPredicted RBP15.92■□□□□ 0.14
CASC11-202ENST00000518376 SCRIBQ14160 1630 aa15.92■□□□□ 0.14
CASC11-202ENST00000518376 FBXO3Q9UK99 471 aa15.81■□□□□ 0.12
CASC11-202ENST00000518376 SPDYE1Q8NFV5 336 aaPredicted RBP15.76■□□□□ 0.11
CASC11-202ENST00000518376 PITPNM1O00562 1244 aa15.75■□□□□ 0.11
CASC11-202ENST00000518376 CLEC11AQ9Y240 323 aa15.73■□□□□ 0.11
CASC11-202ENST00000518376 UNC13AQ9UPW8 1703 aa15.73■□□□□ 0.11
CASC11-202ENST00000518376 STAG3Q9UJ98 1225 aa15.72■□□□□ 0.11
CASC11-202ENST00000518376 VASPP50552 380 aaPredicted RBP15.7■□□□□ 0.1
CASC11-202ENST00000518376 BICRAQ9NZM4 1560 aa15.65■□□□□ 0.1
CASC11-202ENST00000518376 PRR29P0C7W0 189 aa15.58■□□□□ 0.08
CASC11-202ENST00000518376 IFNLR1Q8IU57 520 aaPredicted RBP15.55■□□□□ 0.08
CASC11-202ENST00000518376 MIER1Q8N108 512 aa15.53■□□□□ 0.08
CASC11-202ENST00000518376 CHRDL2Q6WN34 429 aa15.51■□□□□ 0.07
CASC11-202ENST00000518376 PLCD3Q8N3E9 789 aa15.5■□□□□ 0.07
CASC11-202ENST00000518376 CREBZFQ9NS37 354 aa15.49■□□□□ 0.07
CASC11-202ENST00000518376 CHADLQ6NUI6 762 aa15.42■□□□□ 0.06
CASC11-202ENST00000518376 FXR2P51116 673 aaKnown RBP eCLIP15.41■□□□□ 0.06
CASC11-202ENST00000518376 CECR2Q9BXF3 1484 aa15.4■□□□□ 0.06
CASC11-202ENST00000518376 PIP4P2Q8N4L2 257 aa15.37■□□□□ 0.05
CASC11-202ENST00000518376 MNX1P50219 401 aaPredicted RBP15.36■□□□□ 0.05
CASC11-202ENST00000518376 KLHL34Q8N239 644 aa15.36■□□□□ 0.05
CASC11-202ENST00000518376 SUPT5HO00267 1087 aaKnown RBP15.34■□□□□ 0.05
CASC11-202ENST00000518376 PRKAR2AP13861 404 aaKnown RBP15.33■□□□□ 0.04
CASC11-202ENST00000518376 RSF1Q96T23 1441 aaPredicted RBP15.32■□□□□ 0.04
CASC11-202ENST00000518376 PLEKHG5O94827 1062 aa15.31■□□□□ 0.04
CASC11-202ENST00000518376 MROH2BQ7Z745 1585 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 223.5 ms