RNA–Protein interactions for RNA: ENST00000518290.1

ARFGEF1-204, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARFGEF1, Length 3,179 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-204ENST00000518290 FHAD1B1AJZ9 1412 aa12.6□□□□□ -0.39
ARFGEF1-204ENST00000518290 PCGF6Q9BYE7 350 aa12.59□□□□□ -0.39
ARFGEF1-204ENST00000518290 FYCO1Q9BQS8 1478 aa12.59□□□□□ -0.39
ARFGEF1-204ENST00000518290 PCF11O94913 1555 aaKnown RBP12.58□□□□□ -0.4
ARFGEF1-204ENST00000518290 LRRIQ1Q96JM4 1722 aa12.58□□□□□ -0.4
ARFGEF1-204ENST00000518290 UGGT2Q9NYU1 1516 aa12.57□□□□□ -0.4
ARFGEF1-204ENST00000518290 SNAPC4Q5SXM2 1469 aa12.56□□□□□ -0.4
ARFGEF1-204ENST00000518290 MAGI1Q96QZ7 1491 aaPredicted RBP12.56□□□□□ -0.4
ARFGEF1-204ENST00000518290 IQGAP2Q13576 1575 aa12.55□□□□□ -0.4
ARFGEF1-204ENST00000518290 RRBP1Q9P2E9 1410 aaKnown RBP12.53□□□□□ -0.4
ARFGEF1-204ENST00000518290 CASKIN1Q8WXD9 1431 aa12.53□□□□□ -0.4
ARFGEF1-204ENST00000518290 ZNF608Q9ULD9 1512 aaPredicted RBP12.49□□□□□ -0.41
ARFGEF1-204ENST00000518290 TDRD9Q8NDG6 1382 aaKnown RBP12.49□□□□□ -0.41
ARFGEF1-204ENST00000518290 FMN1Q68DA7 1419 aa12.47□□□□□ -0.41
ARFGEF1-204ENST00000518290 GRIN2AQ12879 1464 aa12.47□□□□□ -0.41
ARFGEF1-204ENST00000518290 LRRC9Q6ZRR7 1453 aa12.47□□□□□ -0.41
ARFGEF1-204ENST00000518290 ARHGEF11O15085 1522 aa12.46□□□□□ -0.41
ARFGEF1-204ENST00000518290 KIAA0556O60303 1618 aa12.46□□□□□ -0.41
ARFGEF1-204ENST00000518290 ERCC6Q03468 1493 aa12.46□□□□□ -0.42
ARFGEF1-204ENST00000518290 KIAA0586Q9BVV6 1533 aa12.45□□□□□ -0.42
ARFGEF1-204ENST00000518290 SYNJ2O15056 1496 aa12.45□□□□□ -0.42
ARFGEF1-204ENST00000518290 CEP170Q5SW79 1584 aa12.44□□□□□ -0.42
ARFGEF1-204ENST00000518290 HECW1Q76N89 1606 aa12.44□□□□□ -0.42
ARFGEF1-204ENST00000518290 NUP160Q12769 1436 aa12.44□□□□□ -0.42
ARFGEF1-204ENST00000518290 EHMT2Q96KQ7 1210 aa12.43□□□□□ -0.42
ARFGEF1-204ENST00000518290 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.43□□□□□ -0.42
ARFGEF1-204ENST00000518290 CCDC18Q5T9S5 1454 aa12.42□□□□□ -0.42
ARFGEF1-204ENST00000518290 ZEB1P37275 1124 aaPredicted RBP12.41□□□□□ -0.42
ARFGEF1-204ENST00000518290 SHROOM2Q13796 1616 aa12.41□□□□□ -0.42
ARFGEF1-204ENST00000518290 DISP1Q96F81 1524 aa12.41□□□□□ -0.42
ARFGEF1-204ENST00000518290 EHBP1L1Q8N3D4 1523 aa12.4□□□□□ -0.42
ARFGEF1-204ENST00000518290 FHOD3Q2V2M9 1422 aa12.38□□□□□ -0.43
ARFGEF1-204ENST00000518290 ADCY10Q96PN6 1610 aa12.38□□□□□ -0.43
ARFGEF1-204ENST00000518290 SUPT6HQ7KZ85 1726 aaKnown RBP12.37□□□□□ -0.43
ARFGEF1-204ENST00000518290 RAPGEF6Q8TEU7 1601 aa12.34□□□□□ -0.43
ARFGEF1-204ENST00000518290 CHD1O14646 1710 aa12.34□□□□□ -0.43
ARFGEF1-204ENST00000518290 MAGI3Q5TCQ9 1506 aa12.31□□□□□ -0.44
ARFGEF1-204ENST00000518290 TCOF1Q13428 1488 aaKnown RBP12.31□□□□□ -0.44
ARFGEF1-204ENST00000518290 KANK4Q5T7N3 995 aaPredicted RBP12.3□□□□□ -0.44
ARFGEF1-204ENST00000518290 ABCA8O94911 1581 aa12.3□□□□□ -0.44
ARFGEF1-204ENST00000518290 EPRSP07814 1512 aaKnown RBP12.29□□□□□ -0.44
ARFGEF1-204ENST00000518290 CCNB3Q8WWL7 1395 aa12.29□□□□□ -0.44
ARFGEF1-204ENST00000518290 APLP2Q06481 763 aa12.27□□□□□ -0.45
ARFGEF1-204ENST00000518290 CLASP1Q7Z460 1538 aa12.26□□□□□ -0.45
ARFGEF1-204ENST00000518290 GCC2Q8IWJ2 1684 aa12.26□□□□□ -0.45
ARFGEF1-204ENST00000518290 PHLDB1Q86UU1 1377 aa12.26□□□□□ -0.45
ARFGEF1-204ENST00000518290 CLSPNQ9HAW4 1339 aa12.25□□□□□ -0.45
ARFGEF1-204ENST00000518290 NUP153P49790 1475 aaKnown RBP12.25□□□□□ -0.45
ARFGEF1-204ENST00000518290 PTPN23Q9H3S7 1636 aa12.23□□□□□ -0.45
ARFGEF1-204ENST00000518290 ITSN2Q9NZM3 1697 aa12.23□□□□□ -0.45
ARFGEF1-204ENST00000518290 NCOA2Q15596 1464 aa12.23□□□□□ -0.45
ARFGEF1-204ENST00000518290 AKNAQ7Z591 1439 aa12.22□□□□□ -0.45
ARFGEF1-204ENST00000518290 FGD6Q6ZV73 1430 aa12.22□□□□□ -0.45
ARFGEF1-204ENST00000518290 PPARGC1BQ86YN6 1023 aaKnown RBP12.22□□□□□ -0.45
ARFGEF1-204ENST00000518290 MYOM3Q5VTT5 1437 aa12.21□□□□□ -0.45
ARFGEF1-204ENST00000518290 CROCC2H7BZ55 1655 aa12.21□□□□□ -0.46
ARFGEF1-204ENST00000518290 MIA2Q96PC5 1412 aa12.21□□□□□ -0.46
ARFGEF1-204ENST00000518290 DNMT1P26358 1616 aaKnown RBP12.17□□□□□ -0.46
ARFGEF1-204ENST00000518290 CDK13Q14004 1512 aaKnown RBP12.17□□□□□ -0.46
ARFGEF1-204ENST00000518290 CARMIL2Q6F5E8 1435 aa12.17□□□□□ -0.46
ARFGEF1-204ENST00000518290 ADGBQ8N7X0 1667 aa12.15□□□□□ -0.46
ARFGEF1-204ENST00000518290 DHX57Q6P158 1386 aaKnown RBP12.15□□□□□ -0.46
ARFGEF1-204ENST00000518290 MAPKBP1O60336 1514 aa12.14□□□□□ -0.47
ARFGEF1-204ENST00000518290 CDC42BPAQ5VT25 1732 aa12.13□□□□□ -0.47
ARFGEF1-204ENST00000518290 HFM1A2PYH4 1435 aa12.13□□□□□ -0.47
ARFGEF1-204ENST00000518290 UHRF1BP1LA0JNW5 1464 aa12.12□□□□□ -0.47
ARFGEF1-204ENST00000518290 TROQ12816 1431 aaPredicted RBP12.11□□□□□ -0.47
ARFGEF1-204ENST00000518290 MTUS2Q5JR59 1369 aa12.11□□□□□ -0.47
ARFGEF1-204ENST00000518290 ABCC10Q5T3U5 1492 aa12.1□□□□□ -0.47
ARFGEF1-204ENST00000518290 SETD5Q9C0A6 1442 aa12.1□□□□□ -0.47
ARFGEF1-204ENST00000518290 KIF14Q15058 1648 aa12.1□□□□□ -0.47
ARFGEF1-204ENST00000518290 RANGAP1P46060 587 aaPredicted RBP12.1□□□□□ -0.47
ARFGEF1-204ENST00000518290 PREX2Q70Z35 1606 aa12.09□□□□□ -0.47
ARFGEF1-204ENST00000518290 ABCC2Q92887 1545 aa12.08□□□□□ -0.48
ARFGEF1-204ENST00000518290 PLB1Q6P1J6 1458 aa12.08□□□□□ -0.48
ARFGEF1-204ENST00000518290 ARHGEF5Q12774 1597 aa12.07□□□□□ -0.48
ARFGEF1-204ENST00000518290 ADGRL2O95490 1459 aa12.07□□□□□ -0.48
ARFGEF1-204ENST00000518290 CHMP7Q8WUX9 453 aaPredicted RBP12.07□□□□□ -0.48
ARFGEF1-204ENST00000518290 PTPRKQ15262 1439 aa12.07□□□□□ -0.48
ARFGEF1-204ENST00000518290 ROCK1Q13464 1354 aa12.06□□□□□ -0.48
ARFGEF1-204ENST00000518290 KDM5BQ9UGL1 1544 aa12.06□□□□□ -0.48
ARFGEF1-204ENST00000518290 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.06□□□□□ -0.48
ARFGEF1-204ENST00000518290 P3H3Q8IVL6 736 aa12.06□□□□□ -0.48
ARFGEF1-204ENST00000518290 SHANK2Q9UPX8 1470 aa12.06□□□□□ -0.48
ARFGEF1-204ENST00000518290 RAB3GAP2Q9H2M9 1393 aa12.05□□□□□ -0.48
ARFGEF1-204ENST00000518290 ATP10BO94823 1461 aa12.05□□□□□ -0.48
ARFGEF1-204ENST00000518290 CCER1Q8TC90 406 aaPredicted RBP12.04□□□□□ -0.48
ARFGEF1-204ENST00000518290 JPH4Q96JJ6 628 aa12.04□□□□□ -0.48
ARFGEF1-204ENST00000518290 MAST1Q9Y2H9 1570 aa12.04□□□□□ -0.48
ARFGEF1-204ENST00000518290 NAIPQ13075 1403 aa12.04□□□□□ -0.48
ARFGEF1-204ENST00000518290 PRG4Q92954 1404 aaPredicted RBP12.04□□□□□ -0.48
ARFGEF1-204ENST00000518290 CDC42BPBQ9Y5S2 1711 aa12.04□□□□□ -0.48
ARFGEF1-204ENST00000518290 ACIN1Q9UKV3 1341 aaKnown RBP12.03□□□□□ -0.48
ARFGEF1-204ENST00000518290 PELP1Q8IZL8 1130 aaKnown RBP12.02□□□□□ -0.48
ARFGEF1-204ENST00000518290 ARAP3Q8WWN8 1544 aa12.02□□□□□ -0.48
ARFGEF1-204ENST00000518290 GPATCH8Q9UKJ3 1502 aaKnown RBP12.02□□□□□ -0.48
ARFGEF1-204ENST00000518290 ZCCHC11Q5TAX3 1644 aaKnown RBP12.02□□□□□ -0.49
ARFGEF1-204ENST00000518290 ERCC6L2Q5T890 1561 aa12.01□□□□□ -0.49
ARFGEF1-204ENST00000518290 UACAQ9BZF9 1416 aa12□□□□□ -0.49
ARFGEF1-204ENST00000518290 CAMSAP2Q08AD1 1489 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms