RNA–Protein interactions for RNA: ENST00000517310.5

EFCAB13-202, Transcript of EF-hand calcium binding domain 13, humanhuman

TSL 2

Gene EFCAB13, Length 1,477 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-202ENST00000517310 NUP160Q12769 1436 aa35.34■■■■□ 3.25
EFCAB13-202ENST00000517310 CEP170Q5SW79 1584 aa35.32■■■■□ 3.25
EFCAB13-202ENST00000517310 KIAA0586Q9BVV6 1533 aa35.25■■■■□ 3.23
EFCAB13-202ENST00000517310 IQGAP2Q13576 1575 aa35.2■■■■□ 3.23
EFCAB13-202ENST00000517310 CEP162Q5TB80 1403 aa35.19■■■■□ 3.22
EFCAB13-202ENST00000517310 CLIP1P30622 1438 aa35.1■■■■□ 3.21
EFCAB13-202ENST00000517310 CLASP1Q7Z460 1538 aa35.08■■■■□ 3.21
EFCAB13-202ENST00000517310 UGGT2Q9NYU1 1516 aa35.05■■■■□ 3.2
EFCAB13-202ENST00000517310 RANGAP1P46060 587 aaPredicted RBP35.04■■■■□ 3.2
EFCAB13-202ENST00000517310 OSCARQ8IYS5 282 aa35.03■■■■□ 3.2
EFCAB13-202ENST00000517310 EFCAB5A4FU69 1503 aa35■■■■□ 3.19
EFCAB13-202ENST00000517310 ARHGAP35Q9NRY4 1499 aa34.99■■■■□ 3.19
EFCAB13-202ENST00000517310 SAMD9Q5K651 1589 aa34.98■■■■□ 3.19
EFCAB13-202ENST00000517310 JPH4Q96JJ6 628 aa34.97■■■■□ 3.19
EFCAB13-202ENST00000517310 SHROOM2Q13796 1616 aa34.96■■■■□ 3.19
EFCAB13-202ENST00000517310 DISP1Q96F81 1524 aa34.89■■■■□ 3.18
EFCAB13-202ENST00000517310 ARAP1Q96P48 1450 aa34.86■■■■□ 3.17
EFCAB13-202ENST00000517310 KIAA0556O60303 1618 aa34.86■■■■□ 3.17
EFCAB13-202ENST00000517310 CARMIL2Q6F5E8 1435 aa34.82■■■■□ 3.16
EFCAB13-202ENST00000517310 PRG4Q92954 1404 aaPredicted RBP34.82■■■■□ 3.16
EFCAB13-202ENST00000517310 FHOD3Q2V2M9 1422 aa34.8■■■■□ 3.16
EFCAB13-202ENST00000517310 P3H3Q8IVL6 736 aa34.8■■■■□ 3.16
EFCAB13-202ENST00000517310 VPS8Q8N3P4 1428 aa34.7■■■■□ 3.15
EFCAB13-202ENST00000517310 ERCC6L2Q5T890 1561 aa34.69■■■■□ 3.14
EFCAB13-202ENST00000517310 FMN1Q68DA7 1419 aa34.66■■■■□ 3.14
EFCAB13-202ENST00000517310 PTPRGP23470 1445 aa34.53■■■■□ 3.12
EFCAB13-202ENST00000517310 PCF11O94913 1555 aaKnown RBP34.51■■■■□ 3.12
EFCAB13-202ENST00000517310 CASKIN1Q8WXD9 1431 aa34.5■■■■□ 3.11
EFCAB13-202ENST00000517310 TTBK1Q5TCY1 1321 aaPredicted RBP34.49■■■■□ 3.11
EFCAB13-202ENST00000517310 FYCO1Q9BQS8 1478 aa34.48■■■■□ 3.11
EFCAB13-202ENST00000517310 ARHGEF11O15085 1522 aa34.47■■■■□ 3.11
EFCAB13-202ENST00000517310 RAPGEF6Q8TEU7 1601 aa34.43■■■■□ 3.1
EFCAB13-202ENST00000517310 ABCA8O94911 1581 aa34.42■■■■□ 3.1
EFCAB13-202ENST00000517310 PLB1Q6P1J6 1458 aa34.41■■■■□ 3.1
EFCAB13-202ENST00000517310 HECW1Q76N89 1606 aa34.39■■■■□ 3.1
EFCAB13-202ENST00000517310 RIMBP3CA6NJZ7 1639 aa34.38■■■■□ 3.09
EFCAB13-202ENST00000517310 RIMBP3BA6NNM3 1639 aa34.38■■■■□ 3.09
EFCAB13-202ENST00000517310 RIMBP3Q9UFD9 1639 aa34.38■■■■□ 3.09
EFCAB13-202ENST00000517310 UACAQ9BZF9 1416 aa34.35■■■■□ 3.09
EFCAB13-202ENST00000517310 ATP1B4Q9UN42 357 aaPredicted RBP34.32■■■■□ 3.08
EFCAB13-202ENST00000517310 NUP153P49790 1475 aaKnown RBP34.31■■■■□ 3.08
EFCAB13-202ENST00000517310 LRRIQ1Q96JM4 1722 aa34.3■■■■□ 3.08
EFCAB13-202ENST00000517310 MAP3K1Q13233 1512 aa34.28■■■■□ 3.08
EFCAB13-202ENST00000517310 ABCC2Q92887 1545 aa34.28■■■■□ 3.08
EFCAB13-202ENST00000517310 APLP2Q06481 763 aa34.27■■■■□ 3.08
EFCAB13-202ENST00000517310 UHRF1BP1LA0JNW5 1464 aa34.27■■■■□ 3.08
EFCAB13-202ENST00000517310 CCDC18Q5T9S5 1454 aa34.25■■■■□ 3.07
EFCAB13-202ENST00000517310 EPRSP07814 1512 aaKnown RBP34.25■■■■□ 3.07
EFCAB13-202ENST00000517310 CFAP43Q8NDM7 1665 aa34.24■■■■□ 3.07
EFCAB13-202ENST00000517310 TIAM1Q13009 1591 aa34.24■■■■□ 3.07
EFCAB13-202ENST00000517310 ADCY10Q96PN6 1610 aa34.18■■■■□ 3.06
EFCAB13-202ENST00000517310 CDK13Q14004 1512 aaKnown RBP34.17■■■■□ 3.06
EFCAB13-202ENST00000517310 ATP10BO94823 1461 aa34.14■■■■□ 3.06
EFCAB13-202ENST00000517310 ARID3CA6NKF2 412 aa34.12■■■■□ 3.05
EFCAB13-202ENST00000517310 KDM5BQ9UGL1 1544 aa34.1■■■■□ 3.05
EFCAB13-202ENST00000517310 CYB5RLQ6IPT4 315 aa34.07■■■■□ 3.05
EFCAB13-202ENST00000517310 LRRC9Q6ZRR7 1453 aa34.07■■■■□ 3.04
EFCAB13-202ENST00000517310 KANK4Q5T7N3 995 aaPredicted RBP34.07■■■■□ 3.04
EFCAB13-202ENST00000517310 ZCCHC11Q5TAX3 1644 aaKnown RBP34.04■■■■□ 3.04
EFCAB13-202ENST00000517310 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.03■■■■□ 3.04
EFCAB13-202ENST00000517310 HNRNPUL2Q1KMD3 747 aaKnown RBP34.03■■■■□ 3.04
EFCAB13-202ENST00000517310 DNAJC5Q9H3Z4 198 aa34.02■■■■□ 3.04
EFCAB13-202ENST00000517310 PPARGC1BQ86YN6 1023 aaKnown RBP34.01■■■■□ 3.04
EFCAB13-202ENST00000517310 CDK11AQ9UQ88 783 aaPredicted RBP34.01■■■■□ 3.03
EFCAB13-202ENST00000517310 MAGI3Q5TCQ9 1506 aa34■■■■□ 3.03
EFCAB13-202ENST00000517310 MTUS2Q5JR59 1369 aa33.99■■■■□ 3.03
EFCAB13-202ENST00000517310 EHBP1L1Q8N3D4 1523 aa33.98■■■■□ 3.03
EFCAB13-202ENST00000517310 TROQ12816 1431 aaPredicted RBP33.92■■■■□ 3.02
EFCAB13-202ENST00000517310 PLEKHD1A6NEE1 506 aa33.91■■■■□ 3.02
EFCAB13-202ENST00000517310 NPM1P06748 294 aaKnown RBP eCLIP33.9■■■■□ 3.02
EFCAB13-202ENST00000517310 SUPT6HQ7KZ85 1726 aaKnown RBP33.86■■■■□ 3.01
EFCAB13-202ENST00000517310 NCOA2Q15596 1464 aa33.79■■■■□ 3
EFCAB13-202ENST00000517310 ASXL2Q76L83 1435 aa33.78■■■■□ 3
EFCAB13-202ENST00000517310 WDR7Q9Y4E6 1490 aa33.78■■■■□ 3
EFCAB13-202ENST00000517310 KIF14Q15058 1648 aa33.76■■■■□ 3
EFCAB13-202ENST00000517310 MAPKBP1O60336 1514 aa33.76■■■□□ 2.99
EFCAB13-202ENST00000517310 PHLDB1Q86UU1 1377 aa33.7■■■□□ 2.98
EFCAB13-202ENST00000517310 ABCC10Q5T3U5 1492 aa33.67■■■□□ 2.98
EFCAB13-202ENST00000517310 KCNH8Q96L42 1107 aa33.64■■■□□ 2.98
EFCAB13-202ENST00000517310 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.63■■■□□ 2.97
EFCAB13-202ENST00000517310 MYOM3Q5VTT5 1437 aa33.61■■■□□ 2.97
EFCAB13-202ENST00000517310 CCNB3Q8WWL7 1395 aa33.6■■■□□ 2.97
EFCAB13-202ENST00000517310 TTC37Q6PGP7 1564 aa33.59■■■□□ 2.97
EFCAB13-202ENST00000517310 RRBP1Q9P2E9 1410 aaKnown RBP33.56■■■□□ 2.96
EFCAB13-202ENST00000517310 ITSN2Q9NZM3 1697 aa33.56■■■□□ 2.96
EFCAB13-202ENST00000517310 GPATCH8Q9UKJ3 1502 aaKnown RBP33.56■■■□□ 2.96
EFCAB13-202ENST00000517310 CDC42BPAQ5VT25 1732 aa33.55■■■□□ 2.96
EFCAB13-202ENST00000517310 ABCA9Q8IUA7 1624 aa33.55■■■□□ 2.96
EFCAB13-202ENST00000517310 TRIM26Q12899 539 aaPredicted RBP33.53■■■□□ 2.96
EFCAB13-202ENST00000517310 FGD6Q6ZV73 1430 aa33.53■■■□□ 2.96
EFCAB13-202ENST00000517310 MIA2Q96PC5 1412 aa33.51■■■□□ 2.96
EFCAB13-202ENST00000517310 MYO5CQ9NQX4 1742 aa33.49■■■□□ 2.95
EFCAB13-202ENST00000517310 PREX2Q70Z35 1606 aa33.48■■■□□ 2.95
EFCAB13-202ENST00000517310 GLI2P10070 1586 aa33.47■■■□□ 2.95
EFCAB13-202ENST00000517310 DIP2BQ9P265 1576 aa33.46■■■□□ 2.95
EFCAB13-202ENST00000517310 CDC42BPBQ9Y5S2 1711 aa33.45■■■□□ 2.94
EFCAB13-202ENST00000517310 PTPN23Q9H3S7 1636 aa33.43■■■□□ 2.94
EFCAB13-202ENST00000517310 PLCH2O75038 1416 aa33.43■■■□□ 2.94
EFCAB13-202ENST00000517310 CFDP1Q9UEE9 299 aaPredicted RBP33.43■■■□□ 2.94
EFCAB13-202ENST00000517310 ARAP3Q8WWN8 1544 aa33.41■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms