RNA–Protein interactions for RNA: ENST00000515881.5

DDR1-280, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 956 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-280ENST00000515881 JPH4Q96JJ6 628 aa33.71■■■□□ 2.99
DDR1-280ENST00000515881 PRG4Q92954 1404 aaPredicted RBP33.7■■■□□ 2.99
DDR1-280ENST00000515881 CARMIL1Q5VZK9 1371 aa33.63■■■□□ 2.97
DDR1-280ENST00000515881 KIAA0586Q9BVV6 1533 aa33.61■■■□□ 2.97
DDR1-280ENST00000515881 RAPGEF2Q9Y4G8 1499 aa33.37■■■□□ 2.93
DDR1-280ENST00000515881 IQGAP2Q13576 1575 aa33.32■■■□□ 2.92
DDR1-280ENST00000515881 CARMIL2Q6F5E8 1435 aa33.27■■■□□ 2.92
DDR1-280ENST00000515881 PTPRGP23470 1445 aa33.23■■■□□ 2.91
DDR1-280ENST00000515881 ADCY10Q96PN6 1610 aa33.23■■■□□ 2.91
DDR1-280ENST00000515881 NPM1P06748 294 aaKnown RBP eCLIP33.22■■■□□ 2.91
DDR1-280ENST00000515881 TNIKQ9UKE5 1360 aa33.21■■■□□ 2.91
DDR1-280ENST00000515881 DISP1Q96F81 1524 aa33.15■■■□□ 2.9
DDR1-280ENST00000515881 MAPKBP1O60336 1514 aa33.14■■■□□ 2.9
DDR1-280ENST00000515881 UGGT2Q9NYU1 1516 aa33.14■■■□□ 2.9
DDR1-280ENST00000515881 PRXQ9BXM0 1461 aa33.14■■■□□ 2.9
DDR1-280ENST00000515881 TTBK1Q5TCY1 1321 aaPredicted RBP33.14■■■□□ 2.9
DDR1-280ENST00000515881 ABCC10Q5T3U5 1492 aa33.07■■■□□ 2.88
DDR1-280ENST00000515881 KIF13AQ9H1H9 1805 aa33.05■■■□□ 2.88
DDR1-280ENST00000515881 FAM69CQ0P6D2 419 aa33.02■■■□□ 2.88
DDR1-280ENST00000515881 KIAA0556O60303 1618 aa33.01■■■□□ 2.87
DDR1-280ENST00000515881 ABCC2Q92887 1545 aa33■■■□□ 2.87
DDR1-280ENST00000515881 CTTNBP2Q8WZ74 1663 aa33■■■□□ 2.87
DDR1-280ENST00000515881 UHRF1BP1LA0JNW5 1464 aa32.99■■■□□ 2.87
DDR1-280ENST00000515881 UACAQ9BZF9 1416 aa32.99■■■□□ 2.87
DDR1-280ENST00000515881 DIP2BQ9P265 1576 aa32.98■■■□□ 2.87
DDR1-280ENST00000515881 CSRNP3Q8WYN3 585 aa32.97■■■□□ 2.87
DDR1-280ENST00000515881 GOLGA3Q08378 1498 aa32.92■■■□□ 2.86
DDR1-280ENST00000515881 EEA1Q15075 1411 aa32.91■■■□□ 2.86
DDR1-280ENST00000515881 ASXL2Q76L83 1435 aa32.85■■■□□ 2.85
DDR1-280ENST00000515881 KDM5BQ9UGL1 1544 aa32.83■■■□□ 2.85
DDR1-280ENST00000515881 PLB1Q6P1J6 1458 aa32.83■■■□□ 2.85
DDR1-280ENST00000515881 FAM9AQ8IZU1 332 aaPredicted RBP32.73■■■□□ 2.83
DDR1-280ENST00000515881 ZCCHC11Q5TAX3 1644 aaKnown RBP32.72■■■□□ 2.83
DDR1-280ENST00000515881 ABCA8O94911 1581 aa32.7■■■□□ 2.82
DDR1-280ENST00000515881 GLI2P10070 1586 aa32.7■■■□□ 2.82
DDR1-280ENST00000515881 CHIC1Q5VXU3 224 aa32.69■■■□□ 2.82
DDR1-280ENST00000515881 EPRSP07814 1512 aaKnown RBP32.65■■■□□ 2.82
DDR1-280ENST00000515881 P3H3Q8IVL6 736 aa32.64■■■□□ 2.82
DDR1-280ENST00000515881 SAMD9Q5K651 1589 aa32.62■■■□□ 2.81
DDR1-280ENST00000515881 TSPOAP1O95153 1857 aa32.61■■■□□ 2.81
DDR1-280ENST00000515881 WDR7Q9Y4E6 1490 aa32.6■■■□□ 2.81
DDR1-280ENST00000515881 KDM6BO15054 1643 aa32.59■■■□□ 2.81
DDR1-280ENST00000515881 KIF21BO75037 1637 aa32.59■■■□□ 2.81
DDR1-280ENST00000515881 PPRC1Q5VV67 1664 aaKnown RBP32.52■■■□□ 2.8
DDR1-280ENST00000515881 MAP3K4Q9Y6R4 1608 aa32.51■■■□□ 2.79
DDR1-280ENST00000515881 RANGAP1P46060 587 aaPredicted RBP32.49■■■□□ 2.79
DDR1-280ENST00000515881 AEBP2Q6ZN18 517 aaPredicted RBP32.45■■■□□ 2.79
DDR1-280ENST00000515881 ATP10BO94823 1461 aa32.43■■■□□ 2.78
DDR1-280ENST00000515881 TEX14Q8IWB6 1497 aa32.43■■■□□ 2.78
DDR1-280ENST00000515881 ARID3CA6NKF2 412 aa32.43■■■□□ 2.78
DDR1-280ENST00000515881 FHOD3Q2V2M9 1422 aa32.43■■■□□ 2.78
DDR1-280ENST00000515881 KCNH8Q96L42 1107 aa32.41■■■□□ 2.78
DDR1-280ENST00000515881 RAPGEF6Q8TEU7 1601 aa32.4■■■□□ 2.78
DDR1-280ENST00000515881 EFCAB5A4FU69 1503 aa32.38■■■□□ 2.77
DDR1-280ENST00000515881 EHMT2Q96KQ7 1210 aa32.35■■■□□ 2.77
DDR1-280ENST00000515881 CD109Q6YHK3 1445 aa32.34■■■□□ 2.77
DDR1-280ENST00000515881 UBTFP17480 764 aaKnown RBP32.34■■■□□ 2.77
DDR1-280ENST00000515881 COL17A1Q9UMD9 1497 aaPredicted RBP32.33■■■□□ 2.77
DDR1-280ENST00000515881 NUP153P49790 1475 aaKnown RBP32.32■■■□□ 2.76
DDR1-280ENST00000515881 MAGI3Q5TCQ9 1506 aa32.31■■■□□ 2.76
DDR1-280ENST00000515881 CFAP43Q8NDM7 1665 aa32.31■■■□□ 2.76
DDR1-280ENST00000515881 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.25■■■□□ 2.75
DDR1-280ENST00000515881 HNRNPUL2Q1KMD3 747 aaKnown RBP32.25■■■□□ 2.75
DDR1-280ENST00000515881 ABCA9Q8IUA7 1624 aa32.17■■■□□ 2.74
DDR1-280ENST00000515881 ARHGAP35Q9NRY4 1499 aa32.15■■■□□ 2.74
DDR1-280ENST00000515881 KDM4FA0A1W2PPD8 638 aa32.11■■■□□ 2.73
DDR1-280ENST00000515881 PLEKHD1A6NEE1 506 aa32.1■■■□□ 2.73
DDR1-280ENST00000515881 FMN1Q68DA7 1419 aa32.09■■■□□ 2.73
DDR1-280ENST00000515881 ARAP3Q8WWN8 1544 aa32.05■■■□□ 2.72
DDR1-280ENST00000515881 PHLDB1Q86UU1 1377 aa32.04■■■□□ 2.72
DDR1-280ENST00000515881 CDK13Q14004 1512 aaKnown RBP32.03■■■□□ 2.72
DDR1-280ENST00000515881 NEO1Q92859 1461 aa31.99■■■□□ 2.71
DDR1-280ENST00000515881 HECW1Q76N89 1606 aa31.99■■■□□ 2.71
DDR1-280ENST00000515881 ATP1B4Q9UN42 357 aaPredicted RBP31.97■■■□□ 2.71
DDR1-280ENST00000515881 ADGRL1O94910 1474 aa31.96■■■□□ 2.71
DDR1-280ENST00000515881 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.94■■■□□ 2.76e-7■■■■□ 21.9
DDR1-280ENST00000515881 TTC37Q6PGP7 1564 aa31.88■■■□□ 2.69
DDR1-280ENST00000515881 RAPGEF3O95398 923 aa31.86■■■□□ 2.69
DDR1-280ENST00000515881 CDK11AQ9UQ88 783 aaPredicted RBP31.85■■■□□ 2.69
DDR1-280ENST00000515881 FANCAO15360 1455 aa31.84■■■□□ 2.69
DDR1-280ENST00000515881 AKNAQ7Z591 1439 aa31.81■■■□□ 2.68
DDR1-280ENST00000515881 CLIP1P30622 1438 aa31.79■■■□□ 2.68
DDR1-280ENST00000515881 FRMPD1Q5SYB0 1578 aa31.79■■■□□ 2.68
DDR1-280ENST00000515881 CASKIN1Q8WXD9 1431 aa31.79■■■□□ 2.68
DDR1-280ENST00000515881 CFAP74Q9C0B2 1584 aa31.79■■■□□ 2.68
DDR1-280ENST00000515881 PCF11O94913 1555 aaKnown RBP31.77■■■□□ 2.68
DDR1-280ENST00000515881 PLCH2O75038 1416 aa31.76■■■□□ 2.68
DDR1-280ENST00000515881 TROQ12816 1431 aaPredicted RBP31.76■■■□□ 2.68
DDR1-280ENST00000515881 DENND4BO75064 1496 aaPredicted RBP31.76■■■□□ 2.67
DDR1-280ENST00000515881 LRRIQ1Q96JM4 1722 aa31.72■■■□□ 2.67
DDR1-280ENST00000515881 CCDC18Q5T9S5 1454 aa31.72■■■□□ 2.67
DDR1-280ENST00000515881 KIF14Q15058 1648 aa31.71■■■□□ 2.67
DDR1-280ENST00000515881 FYCO1Q9BQS8 1478 aa31.68■■■□□ 2.66
DDR1-280ENST00000515881 RICTORQ6R327 1708 aa31.66■■■□□ 2.66
DDR1-280ENST00000515881 EFCAB2Q5VUJ9 269 aa31.63■■■□□ 2.65
DDR1-280ENST00000515881 SCAPERQ9BY12 1400 aa31.62■■■□□ 2.65
DDR1-280ENST00000515881 MYO5CQ9NQX4 1742 aa31.62■■■□□ 2.65
DDR1-280ENST00000515881 ZMYM4Q5VZL5 1548 aa31.61■■■□□ 2.65
DDR1-280ENST00000515881 ARHGEF40Q8TER5 1519 aa31.61■■■□□ 2.65
DDR1-280ENST00000515881 POGZQ7Z3K3 1410 aa31.58■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms