RNA–Protein interactions for RNA: ENST00000515731.1

SDHC-209, Transcript of succinate dehydrogenase complex subunit C, humanhuman

TSL 3

Gene SDHC, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHC-209ENST00000515731 CUL7Q14999 1698 aa28.32■■■□□ 2.12
SDHC-209ENST00000515731 IGF1RP08069 1367 aa28.3■■■□□ 2.12
SDHC-209ENST00000515731 KIF27Q86VH2 1401 aa28.28■■■□□ 2.12
SDHC-209ENST00000515731 KIAA0586Q9BVV6 1533 aa28.27■■■□□ 2.12
SDHC-209ENST00000515731 MAPKBP1O60336 1514 aa28.2■■■□□ 2.1
SDHC-209ENST00000515731 ADCY10Q96PN6 1610 aa28.18■■■□□ 2.1
SDHC-209ENST00000515731 ABCC10Q5T3U5 1492 aa28.16■■■□□ 2.1
SDHC-209ENST00000515731 AEBP2Q6ZN18 517 aaPredicted RBP28.13■■■□□ 2.09
SDHC-209ENST00000515731 NPM1P06748 294 aaKnown RBP eCLIP28.12■■■□□ 2.09
SDHC-209ENST00000515731 DIP2BQ9P265 1576 aa28.09■■■□□ 2.09
SDHC-209ENST00000515731 CARMIL1Q5VZK9 1371 aa28.09■■■□□ 2.09
SDHC-209ENST00000515731 FAM69CQ0P6D2 419 aa28.05■■■□□ 2.08
SDHC-209ENST00000515731 PTPRGP23470 1445 aa27.97■■■□□ 2.07
SDHC-209ENST00000515731 IQGAP2Q13576 1575 aa27.97■■■□□ 2.07
SDHC-209ENST00000515731 CARMIL2Q6F5E8 1435 aa27.95■■■□□ 2.07
SDHC-209ENST00000515731 TNIKQ9UKE5 1360 aa27.94■■■□□ 2.06
SDHC-209ENST00000515731 TSPOAP1O95153 1857 aa27.89■■■□□ 2.05
SDHC-209ENST00000515731 ABCC2Q92887 1545 aa27.88■■■□□ 2.05
SDHC-209ENST00000515731 UHRF1BP1LA0JNW5 1464 aa27.87■■■□□ 2.05
SDHC-209ENST00000515731 DISP1Q96F81 1524 aa27.86■■■□□ 2.05
SDHC-209ENST00000515731 KDM6BO15054 1643 aa27.85■■■□□ 2.05
SDHC-209ENST00000515731 RAPGEF2Q9Y4G8 1499 aa27.84■■■□□ 2.05
SDHC-209ENST00000515731 UGGT2Q9NYU1 1516 aa27.82■■■□□ 2.04
SDHC-209ENST00000515731 GLI2P10070 1586 aa27.82■■■□□ 2.04
SDHC-209ENST00000515731 PLB1Q6P1J6 1458 aa27.8■■■□□ 2.04
SDHC-209ENST00000515731 UACAQ9BZF9 1416 aa27.79■■■□□ 2.04
SDHC-209ENST00000515731 ASXL2Q76L83 1435 aa27.76■■■□□ 2.04
SDHC-209ENST00000515731 PPRC1Q5VV67 1664 aaKnown RBP27.75■■■□□ 2.03
SDHC-209ENST00000515731 KDM5BQ9UGL1 1544 aa27.73■■■□□ 2.03
SDHC-209ENST00000515731 KIAA0556O60303 1618 aa27.72■■■□□ 2.03
SDHC-209ENST00000515731 TTBK1Q5TCY1 1321 aaPredicted RBP27.71■■■□□ 2.03
SDHC-209ENST00000515731 CTTNBP2Q8WZ74 1663 aa27.7■■■□□ 2.02
SDHC-209ENST00000515731 ZCCHC11Q5TAX3 1644 aaKnown RBP27.66■■■□□ 2.02
SDHC-209ENST00000515731 MAP3K4Q9Y6R4 1608 aa27.64■■■□□ 2.02
SDHC-209ENST00000515731 EPRSP07814 1512 aaKnown RBP27.63■■■□□ 2.01
SDHC-209ENST00000515731 KDM4FA0A1W2PPD8 638 aa27.59■■■□□ 2.01
SDHC-209ENST00000515731 GOLGA3Q08378 1498 aa27.56■■■□□ 2
SDHC-209ENST00000515731 PRXQ9BXM0 1461 aa27.56■■■□□ 2
SDHC-209ENST00000515731 TEX14Q8IWB6 1497 aa27.51■■■□□ 2
SDHC-209ENST00000515731 ABCA8O94911 1581 aa27.5■■□□□ 1.99
SDHC-209ENST00000515731 COL17A1Q9UMD9 1497 aaPredicted RBP27.49■■□□□ 1.99
SDHC-209ENST00000515731 WDR7Q9Y4E6 1490 aa27.49■■□□□ 1.99
SDHC-209ENST00000515731 CFAP43Q8NDM7 1665 aa27.43■■□□□ 1.98
SDHC-209ENST00000515731 MAGI3Q5TCQ9 1506 aa27.38■■□□□ 1.97
SDHC-209ENST00000515731 ADGRL1O94910 1474 aa27.34■■□□□ 1.97
SDHC-209ENST00000515731 CD109Q6YHK3 1445 aa27.33■■□□□ 1.96
SDHC-209ENST00000515731 SAMD9Q5K651 1589 aa27.28■■□□□ 1.96
SDHC-209ENST00000515731 CSRNP3Q8WYN3 585 aa27.25■■□□□ 1.95
SDHC-209ENST00000515731 KCNH8Q96L42 1107 aa27.25■■□□□ 1.95
SDHC-209ENST00000515731 ATP10BO94823 1461 aa27.24■■□□□ 1.95
SDHC-209ENST00000515731 FAM9AQ8IZU1 332 aaPredicted RBP27.23■■□□□ 1.95
SDHC-209ENST00000515731 ARAP3Q8WWN8 1544 aa27.18■■□□□ 1.94
SDHC-209ENST00000515731 ABCA9Q8IUA7 1624 aa27.18■■□□□ 1.94
SDHC-209ENST00000515731 EEA1Q15075 1411 aa27.17■■□□□ 1.94
SDHC-209ENST00000515731 RAPGEF6Q8TEU7 1601 aa27.17■■□□□ 1.94
SDHC-209ENST00000515731 P3H3Q8IVL6 736 aa27.15■■□□□ 1.94
SDHC-209ENST00000515731 PHLDB1Q86UU1 1377 aa27.12■■□□□ 1.93
SDHC-209ENST00000515731 KIF21BO75037 1637 aa27.05■■□□□ 1.92
SDHC-209ENST00000515731 NUP153P49790 1475 aaKnown RBP27.04■■□□□ 1.92
SDHC-209ENST00000515731 ARID3CA6NKF2 412 aa27.03■■□□□ 1.92
SDHC-209ENST00000515731 NEO1Q92859 1461 aa27.03■■□□□ 1.92
SDHC-209ENST00000515731 HECW2Q9P2P5 1572 aa27.02■■□□□ 1.92
SDHC-209ENST00000515731 EFCAB5A4FU69 1503 aa26.96■■□□□ 1.91
SDHC-209ENST00000515731 FHOD3Q2V2M9 1422 aa26.96■■□□□ 1.91
SDHC-209ENST00000515731 FRMPD1Q5SYB0 1578 aa26.92■■□□□ 1.9
SDHC-209ENST00000515731 ADAMTSL3P82987 1691 aa26.92■■□□□ 1.9
SDHC-209ENST00000515731 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.91■■□□□ 1.9
SDHC-209ENST00000515731 HNRNPUL2Q1KMD3 747 aaKnown RBP26.91■■□□□ 1.9
SDHC-209ENST00000515731 RAPGEF3O95398 923 aa26.88■■□□□ 1.89
SDHC-209ENST00000515731 PLEKHD1A6NEE1 506 aa26.87■■□□□ 1.89
SDHC-209ENST00000515731 RICTORQ6R327 1708 aa26.85■■□□□ 1.89
SDHC-209ENST00000515731 CFAP74Q9C0B2 1584 aa26.85■■□□□ 1.89
SDHC-209ENST00000515731 BCORL1Q5H9F3 1711 aa26.84■■□□□ 1.89
SDHC-209ENST00000515731 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.84■■□□□ 1.89
SDHC-209ENST00000515731 RANGAP1P46060 587 aaPredicted RBP26.83■■□□□ 1.89
SDHC-209ENST00000515731 ILDR1Q86SU0 546 aaPredicted RBP26.82■■□□□ 1.88
SDHC-209ENST00000515731 AKNAQ7Z591 1439 aa26.79■■□□□ 1.88
SDHC-209ENST00000515731 DENND4BO75064 1496 aaPredicted RBP26.79■■□□□ 1.88
SDHC-209ENST00000515731 PTPRMP28827 1452 aa26.79■■□□□ 1.88
SDHC-209ENST00000515731 TTC37Q6PGP7 1564 aa26.78■■□□□ 1.88
SDHC-209ENST00000515731 ARHGEF40Q8TER5 1519 aa26.77■■□□□ 1.88
SDHC-209ENST00000515731 FANCAO15360 1455 aa26.77■■□□□ 1.88
SDHC-209ENST00000515731 ZMYM4Q5VZL5 1548 aa26.74■■□□□ 1.87
SDHC-209ENST00000515731 MADDQ8WXG6 1647 aa26.72■■□□□ 1.87
SDHC-209ENST00000515731 CDK13Q14004 1512 aaKnown RBP26.71■■□□□ 1.87
SDHC-209ENST00000515731 FMN1Q68DA7 1419 aa26.69■■□□□ 1.86
SDHC-209ENST00000515731 MAGI2Q86UL8 1455 aa26.68■■□□□ 1.86
SDHC-209ENST00000515731 HECW1Q76N89 1606 aa26.67■■□□□ 1.86
SDHC-209ENST00000515731 PLCH2O75038 1416 aa26.66■■□□□ 1.86
SDHC-209ENST00000515731 ARHGAP35Q9NRY4 1499 aa26.66■■□□□ 1.86
SDHC-209ENST00000515731 ARID4BQ4LE39 1312 aaPredicted RBP26.64■■□□□ 1.85
SDHC-209ENST00000515731 MYO5CQ9NQX4 1742 aa26.63■■□□□ 1.85
SDHC-209ENST00000515731 SIGLEC1Q9BZZ2 1709 aa26.62■■□□□ 1.85
SDHC-209ENST00000515731 ZFYVE16Q7Z3T8 1539 aa26.62■■□□□ 1.85
SDHC-209ENST00000515731 UBTFP17480 764 aaKnown RBP26.62■■□□□ 1.85
SDHC-209ENST00000515731 RIMS1Q86UR5 1692 aaKnown RBP26.62■■□□□ 1.85
SDHC-209ENST00000515731 CHIC1Q5VXU3 224 aa26.6■■□□□ 1.85
SDHC-209ENST00000515731 PCF11O94913 1555 aaKnown RBP26.58■■□□□ 1.85
SDHC-209ENST00000515731 POGZQ7Z3K3 1410 aa26.58■■□□□ 1.85
SDHC-209ENST00000515731 YEATS2Q9ULM3 1422 aa26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms