RNA–Protein interactions for RNA: ENST00000515621.5

NR1I3-234, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-234ENST00000515621 MAGI1Q96QZ7 1491 aaPredicted RBP14.54□□□□□ -0.08
NR1I3-234ENST00000515621 ADAMTS12P58397 1594 aa14.53□□□□□ -0.08
NR1I3-234ENST00000515621 ZNF608Q9ULD9 1512 aaPredicted RBP14.52□□□□□ -0.08
NR1I3-234ENST00000515621 UBTFP17480 764 aaKnown RBP14.52□□□□□ -0.09
NR1I3-234ENST00000515621 SLC4A1APQ9BWU0 796 aaKnown RBP14.52□□□□□ -0.09
NR1I3-234ENST00000515621 AQRO60306 1485 aaKnown RBP eCLIP14.5□□□□□ -0.09
NR1I3-234ENST00000515621 MSH5O43196 834 aa14.46□□□□□ -0.09
NR1I3-234ENST00000515621 CLIP1P30622 1438 aa14.46□□□□□ -0.09
NR1I3-234ENST00000515621 SYNJ2O15056 1496 aa14.44□□□□□ -0.1
NR1I3-234ENST00000515621 SNAPC4Q5SXM2 1469 aa14.44□□□□□ -0.1
NR1I3-234ENST00000515621 SCAF1Q9H7N4 1312 aaKnown RBP14.43□□□□□ -0.1
NR1I3-234ENST00000515621 CTTNBP2Q8WZ74 1663 aa14.43□□□□□ -0.1
NR1I3-234ENST00000515621 EFCAB5A4FU69 1503 aa14.42□□□□□ -0.1
NR1I3-234ENST00000515621 GRIN2AQ12879 1464 aa14.4□□□□□ -0.1
NR1I3-234ENST00000515621 NPM3O75607 178 aaKnown RBP14.39□□□□□ -0.11
NR1I3-234ENST00000515621 VPS8Q8N3P4 1428 aa14.36□□□□□ -0.11
NR1I3-234ENST00000515621 KIAA0586Q9BVV6 1533 aa14.36□□□□□ -0.11
NR1I3-234ENST00000515621 NUP160Q12769 1436 aa14.34□□□□□ -0.11
NR1I3-234ENST00000515621 ARHGAP35Q9NRY4 1499 aa14.34□□□□□ -0.11
NR1I3-234ENST00000515621 CNKSR2Q8WXI2 1034 aa14.34□□□□□ -0.11
NR1I3-234ENST00000515621 IQGAP2Q13576 1575 aa14.34□□□□□ -0.11
NR1I3-234ENST00000515621 SAMD9Q5K651 1589 aa14.32□□□□□ -0.12
NR1I3-234ENST00000515621 ARAP1Q96P48 1450 aa14.31□□□□□ -0.12
NR1I3-234ENST00000515621 UGGT2Q9NYU1 1516 aa14.31□□□□□ -0.12
NR1I3-234ENST00000515621 CHMP7Q8WUX9 453 aaPredicted RBP14.29□□□□□ -0.12
NR1I3-234ENST00000515621 CEP170Q5SW79 1584 aa14.27□□□□□ -0.12
NR1I3-234ENST00000515621 FMN1Q68DA7 1419 aa14.25□□□□□ -0.13
NR1I3-234ENST00000515621 MAP3K1Q13233 1512 aa14.24□□□□□ -0.13
NR1I3-234ENST00000515621 FYCO1Q9BQS8 1478 aa14.21□□□□□ -0.13
NR1I3-234ENST00000515621 CHD1O14646 1710 aa14.2□□□□□ -0.14
NR1I3-234ENST00000515621 KIAA0556O60303 1618 aa14.19□□□□□ -0.14
NR1I3-234ENST00000515621 CARMIL2Q6F5E8 1435 aa14.18□□□□□ -0.14
NR1I3-234ENST00000515621 CASKIN1Q8WXD9 1431 aa14.18□□□□□ -0.14
NR1I3-234ENST00000515621 DISP1Q96F81 1524 aa14.17□□□□□ -0.14
NR1I3-234ENST00000515621 FHOD3Q2V2M9 1422 aa14.16□□□□□ -0.14
NR1I3-234ENST00000515621 SHROOM2Q13796 1616 aa14.16□□□□□ -0.14
NR1I3-234ENST00000515621 FBLN2P98095 1184 aa14.15□□□□□ -0.14
NR1I3-234ENST00000515621 CLASP1Q7Z460 1538 aa14.15□□□□□ -0.14
NR1I3-234ENST00000515621 PCF11O94913 1555 aaKnown RBP14.13□□□□□ -0.15
NR1I3-234ENST00000515621 APLP2Q06481 763 aa14.13□□□□□ -0.15
NR1I3-234ENST00000515621 RANGAP1P46060 587 aaPredicted RBP14.12□□□□□ -0.15
NR1I3-234ENST00000515621 JPH4Q96JJ6 628 aa14.11□□□□□ -0.15
NR1I3-234ENST00000515621 CFAP43Q8NDM7 1665 aa14.1□□□□□ -0.15
NR1I3-234ENST00000515621 TIAM1Q13009 1591 aa14.1□□□□□ -0.15
NR1I3-234ENST00000515621 HECW1Q76N89 1606 aa14.1□□□□□ -0.15
NR1I3-234ENST00000515621 CCDC18Q5T9S5 1454 aa14.1□□□□□ -0.15
NR1I3-234ENST00000515621 TRIM26Q12899 539 aaPredicted RBP14.08□□□□□ -0.16
NR1I3-234ENST00000515621 PRG4Q92954 1404 aaPredicted RBP14.05□□□□□ -0.16
NR1I3-234ENST00000515621 P3H3Q8IVL6 736 aa14.03□□□□□ -0.16
NR1I3-234ENST00000515621 LRRC9Q6ZRR7 1453 aa14.03□□□□□ -0.16
NR1I3-234ENST00000515621 RAPGEF6Q8TEU7 1601 aa14.03□□□□□ -0.16
NR1I3-234ENST00000515621 MAPK8IP2Q13387 824 aaPredicted RBP14.02□□□□□ -0.17
NR1I3-234ENST00000515621 ABCA8O94911 1581 aa14□□□□□ -0.17
NR1I3-234ENST00000515621 EPRSP07814 1512 aaKnown RBP14□□□□□ -0.17
NR1I3-234ENST00000515621 EHBP1L1Q8N3D4 1523 aa13.99□□□□□ -0.17
NR1I3-234ENST00000515621 PTPRGP23470 1445 aa13.98□□□□□ -0.17
NR1I3-234ENST00000515621 OSCARQ8IYS5 282 aa13.97□□□□□ -0.17
NR1I3-234ENST00000515621 NUP153P49790 1475 aaKnown RBP13.97□□□□□ -0.17
NR1I3-234ENST00000515621 UHRF1BP1LA0JNW5 1464 aa13.94□□□□□ -0.18
NR1I3-234ENST00000515621 LRRIQ1Q96JM4 1722 aa13.94□□□□□ -0.18
NR1I3-234ENST00000515621 MTUS2Q5JR59 1369 aa13.94□□□□□ -0.18
NR1I3-234ENST00000515621 RRBP1Q9P2E9 1410 aaKnown RBP13.93□□□□□ -0.18
NR1I3-234ENST00000515621 PLB1Q6P1J6 1458 aa13.93□□□□□ -0.18
NR1I3-234ENST00000515621 UACAQ9BZF9 1416 aa13.92□□□□□ -0.18
NR1I3-234ENST00000515621 KANK4Q5T7N3 995 aaPredicted RBP13.92□□□□□ -0.18
NR1I3-234ENST00000515621 CDK11AQ9UQ88 783 aaPredicted RBP13.92□□□□□ -0.18
NR1I3-234ENST00000515621 ARHGEF11O15085 1522 aa13.91□□□□□ -0.18
NR1I3-234ENST00000515621 ABCC2Q92887 1545 aa13.91□□□□□ -0.18
NR1I3-234ENST00000515621 RNF216Q9NWF9 866 aaPredicted RBP13.91□□□□□ -0.18
NR1I3-234ENST00000515621 SUPT6HQ7KZ85 1726 aaKnown RBP13.9□□□□□ -0.18
NR1I3-234ENST00000515621 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.9□□□□□ -0.18
NR1I3-234ENST00000515621 PCGF6Q9BYE7 350 aa13.89□□□□□ -0.19
NR1I3-234ENST00000515621 ERCC6L2Q5T890 1561 aa13.88□□□□□ -0.19
NR1I3-234ENST00000515621 CDK13Q14004 1512 aaKnown RBP13.88□□□□□ -0.19
NR1I3-234ENST00000515621 ATP1B4Q9UN42 357 aaPredicted RBP13.87□□□□□ -0.19
NR1I3-234ENST00000515621 TROQ12816 1431 aaPredicted RBP13.87□□□□□ -0.19
NR1I3-234ENST00000515621 ADCY10Q96PN6 1610 aa13.86□□□□□ -0.19
NR1I3-234ENST00000515621 MAGI3Q5TCQ9 1506 aa13.86□□□□□ -0.19
NR1I3-234ENST00000515621 NCOA2Q15596 1464 aa13.86□□□□□ -0.19
NR1I3-234ENST00000515621 PPARGC1BQ86YN6 1023 aaKnown RBP13.85□□□□□ -0.19
NR1I3-234ENST00000515621 ATP10BO94823 1461 aa13.85□□□□□ -0.19
NR1I3-234ENST00000515621 KDM5BQ9UGL1 1544 aa13.85□□□□□ -0.19
NR1I3-234ENST00000515621 CCNB3Q8WWL7 1395 aa13.84□□□□□ -0.19
NR1I3-234ENST00000515621 ZBTB22O15209 634 aa13.84□□□□□ -0.19
NR1I3-234ENST00000515621 PHLDB1Q86UU1 1377 aa13.83□□□□□ -0.19
NR1I3-234ENST00000515621 MYOM3Q5VTT5 1437 aa13.83□□□□□ -0.2
NR1I3-234ENST00000515621 MIA2Q96PC5 1412 aa13.82□□□□□ -0.2
NR1I3-234ENST00000515621 FGD6Q6ZV73 1430 aa13.81□□□□□ -0.2
NR1I3-234ENST00000515621 KIF14Q15058 1648 aa13.79□□□□□ -0.2
NR1I3-234ENST00000515621 FOXD4L1Q9NU39 408 aa13.79□□□□□ -0.2
NR1I3-234ENST00000515621 TCOF1Q13428 1488 aaKnown RBP13.79□□□□□ -0.2
NR1I3-234ENST00000515621 PLEKHD1A6NEE1 506 aa13.78□□□□□ -0.2
NR1I3-234ENST00000515621 ITSN2Q9NZM3 1697 aa13.77□□□□□ -0.21
NR1I3-234ENST00000515621 DMRT2Q9Y5R5 561 aa13.77□□□□□ -0.21
NR1I3-234ENST00000515621 ZCCHC11Q5TAX3 1644 aaKnown RBP13.75□□□□□ -0.21
NR1I3-234ENST00000515621 TTBK1Q5TCY1 1321 aaPredicted RBP13.75□□□□□ -0.21
NR1I3-234ENST00000515621 ABCC10Q5T3U5 1492 aa13.74□□□□□ -0.21
NR1I3-234ENST00000515621 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.72□□□□□ -0.21
NR1I3-234ENST00000515621 HNRNPUL2Q1KMD3 747 aaKnown RBP13.72□□□□□ -0.21
NR1I3-234ENST00000515621 PTPN23Q9H3S7 1636 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms