RNA–Protein interactions for RNA: ENST00000515056.5

APBB3-221, Transcript of amyloid beta precursor protein binding family B member 3, humanhuman

TSL 2

Gene APBB3, Length 2,064 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBB3-221ENST00000515056 OSCARQ8IYS5 282 aa22.92■■□□□ 1.26
APBB3-221ENST00000515056 UBTFP17480 764 aaKnown RBP22.9■■□□□ 1.26
APBB3-221ENST00000515056 PPARGC1BQ86YN6 1023 aaKnown RBP22.89■■□□□ 1.25
APBB3-221ENST00000515056 GOLGA3Q08378 1498 aa22.88■■□□□ 1.25
APBB3-221ENST00000515056 NUP160Q12769 1436 aa22.85■■□□□ 1.25
APBB3-221ENST00000515056 CEP170Q5SW79 1584 aa22.83■■□□□ 1.24
APBB3-221ENST00000515056 KIAA0586Q9BVV6 1533 aa22.78■■□□□ 1.24
APBB3-221ENST00000515056 MYT1Q01538 1121 aa22.76■■□□□ 1.23
APBB3-221ENST00000515056 JPH4Q96JJ6 628 aa22.73■■□□□ 1.23
APBB3-221ENST00000515056 TNIKQ9UKE5 1360 aa22.73■■□□□ 1.23
APBB3-221ENST00000515056 CLASP1Q7Z460 1538 aa22.71■■□□□ 1.23
APBB3-221ENST00000515056 CTTNBP2Q8WZ74 1663 aa22.7■■□□□ 1.22
APBB3-221ENST00000515056 ZEB1P37275 1124 aaPredicted RBP22.7■■□□□ 1.22
APBB3-221ENST00000515056 RANGAP1P46060 587 aaPredicted RBP22.7■■□□□ 1.22
APBB3-221ENST00000515056 IQGAP2Q13576 1575 aa22.68■■□□□ 1.22
APBB3-221ENST00000515056 PRG4Q92954 1404 aaPredicted RBP22.58■■□□□ 1.21
APBB3-221ENST00000515056 UGGT2Q9NYU1 1516 aa22.58■■□□□ 1.21
APBB3-221ENST00000515056 SHROOM2Q13796 1616 aa22.58■■□□□ 1.2
APBB3-221ENST00000515056 P3H3Q8IVL6 736 aa22.56■■□□□ 1.2
APBB3-221ENST00000515056 DISP1Q96F81 1524 aa22.53■■□□□ 1.2
APBB3-221ENST00000515056 CEP162Q5TB80 1403 aa22.52■■□□□ 1.2
APBB3-221ENST00000515056 CARMIL2Q6F5E8 1435 aa22.52■■□□□ 1.2
APBB3-221ENST00000515056 CLIP1P30622 1438 aa22.51■■□□□ 1.19
APBB3-221ENST00000515056 ERCC6L2Q5T890 1561 aa22.5■■□□□ 1.19
APBB3-221ENST00000515056 DNAJC5Q9H3Z4 198 aa22.5■■□□□ 1.19
APBB3-221ENST00000515056 ARHGAP35Q9NRY4 1499 aa22.48■■□□□ 1.19
APBB3-221ENST00000515056 SAMD9Q5K651 1589 aa22.46■■□□□ 1.19
APBB3-221ENST00000515056 TTBK1Q5TCY1 1321 aaPredicted RBP22.46■■□□□ 1.19
APBB3-221ENST00000515056 SCAF1Q9H7N4 1312 aaKnown RBP22.45■■□□□ 1.18
APBB3-221ENST00000515056 KIAA0556O60303 1618 aa22.45■■□□□ 1.18
APBB3-221ENST00000515056 EFCAB5A4FU69 1503 aa22.44■■□□□ 1.18
APBB3-221ENST00000515056 ARHGEF11O15085 1522 aa22.44■■□□□ 1.18
APBB3-221ENST00000515056 FHOD3Q2V2M9 1422 aa22.42■■□□□ 1.18
APBB3-221ENST00000515056 PTPRGP23470 1445 aa22.4■■□□□ 1.18
APBB3-221ENST00000515056 ARAP1Q96P48 1450 aa22.38■■□□□ 1.17
APBB3-221ENST00000515056 RIMBP3CA6NJZ7 1639 aa22.37■■□□□ 1.17
APBB3-221ENST00000515056 RIMBP3BA6NNM3 1639 aa22.37■■□□□ 1.17
APBB3-221ENST00000515056 RIMBP3Q9UFD9 1639 aa22.37■■□□□ 1.17
APBB3-221ENST00000515056 CYB5RLQ6IPT4 315 aa22.34■■□□□ 1.17
APBB3-221ENST00000515056 FMN1Q68DA7 1419 aa22.29■■□□□ 1.16
APBB3-221ENST00000515056 PLB1Q6P1J6 1458 aa22.25■■□□□ 1.15
APBB3-221ENST00000515056 ATP1B4Q9UN42 357 aaPredicted RBP22.24■■□□□ 1.15
APBB3-221ENST00000515056 UACAQ9BZF9 1416 aa22.23■■□□□ 1.15
APBB3-221ENST00000515056 VPS8Q8N3P4 1428 aa22.21■■□□□ 1.15
APBB3-221ENST00000515056 ABCA8O94911 1581 aa22.18■■□□□ 1.14
APBB3-221ENST00000515056 CASKIN1Q8WXD9 1431 aa22.17■■□□□ 1.14
APBB3-221ENST00000515056 RAPGEF6Q8TEU7 1601 aa22.16■■□□□ 1.14
APBB3-221ENST00000515056 ARID3CA6NKF2 412 aa22.16■■□□□ 1.14
APBB3-221ENST00000515056 UHRF1BP1LA0JNW5 1464 aa22.14■■□□□ 1.14
APBB3-221ENST00000515056 ABCC2Q92887 1545 aa22.14■■□□□ 1.13
APBB3-221ENST00000515056 NUP153P49790 1475 aaKnown RBP22.12■■□□□ 1.13
APBB3-221ENST00000515056 PCF11O94913 1555 aaKnown RBP22.12■■□□□ 1.13
APBB3-221ENST00000515056 ADCY10Q96PN6 1610 aa22.11■■□□□ 1.13
APBB3-221ENST00000515056 FYCO1Q9BQS8 1478 aa22.11■■□□□ 1.13
APBB3-221ENST00000515056 NPM1P06748 294 aaKnown RBP eCLIP22.1■■□□□ 1.13
APBB3-221ENST00000515056 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.09■■□□□ 1.13
APBB3-221ENST00000515056 HNRNPUL2Q1KMD3 747 aaKnown RBP22.09■■□□□ 1.13
APBB3-221ENST00000515056 ATP10BO94823 1461 aa22.07■■□□□ 1.12
APBB3-221ENST00000515056 HECW1Q76N89 1606 aa22.07■■□□□ 1.12
APBB3-221ENST00000515056 CCER1Q8TC90 406 aaPredicted RBP22.07■■□□□ 1.12
APBB3-221ENST00000515056 EPRSP07814 1512 aaKnown RBP22.05■■□□□ 1.12
APBB3-221ENST00000515056 KDM5BQ9UGL1 1544 aa22.05■■□□□ 1.12
APBB3-221ENST00000515056 APLP2Q06481 763 aa22.04■■□□□ 1.12
APBB3-221ENST00000515056 CDK13Q14004 1512 aaKnown RBP22.01■■□□□ 1.11
APBB3-221ENST00000515056 LRRIQ1Q96JM4 1722 aa22.01■■□□□ 1.11
APBB3-221ENST00000515056 CCDC18Q5T9S5 1454 aa21.99■■□□□ 1.11
APBB3-221ENST00000515056 PLEKHD1A6NEE1 506 aa21.99■■□□□ 1.11
APBB3-221ENST00000515056 CDK11AQ9UQ88 783 aaPredicted RBP21.99■■□□□ 1.11
APBB3-221ENST00000515056 ZCCHC11Q5TAX3 1644 aaKnown RBP21.98■■□□□ 1.11
APBB3-221ENST00000515056 KANK4Q5T7N3 995 aaPredicted RBP21.94■■□□□ 1.1
APBB3-221ENST00000515056 MAP3K1Q13233 1512 aa21.93■■□□□ 1.1
APBB3-221ENST00000515056 TIAM1Q13009 1591 aa21.92■■□□□ 1.1
APBB3-221ENST00000515056 ACIN1Q9UKV3 1341 aaKnown RBP21.92■■□□□ 1.1
APBB3-221ENST00000515056 ASXL2Q76L83 1435 aa21.91■■□□□ 1.1
APBB3-221ENST00000515056 KCNH8Q96L42 1107 aa21.91■■□□□ 1.1
APBB3-221ENST00000515056 MTUS2Q5JR59 1369 aa21.88■■□□□ 1.09
APBB3-221ENST00000515056 MAPKBP1O60336 1514 aa21.86■■□□□ 1.09
APBB3-221ENST00000515056 MAGI3Q5TCQ9 1506 aa21.86■■□□□ 1.09
APBB3-221ENST00000515056 LRRC9Q6ZRR7 1453 aa21.86■■□□□ 1.09
APBB3-221ENST00000515056 CFAP43Q8NDM7 1665 aa21.86■■□□□ 1.09
APBB3-221ENST00000515056 TROQ12816 1431 aaPredicted RBP21.85■■□□□ 1.09
APBB3-221ENST00000515056 WDR7Q9Y4E6 1490 aa21.85■■□□□ 1.09
APBB3-221ENST00000515056 EHBP1L1Q8N3D4 1523 aa21.77■■□□□ 1.08
APBB3-221ENST00000515056 FAM69CQ0P6D2 419 aa21.77■■□□□ 1.08
APBB3-221ENST00000515056 ABCC10Q5T3U5 1492 aa21.74■■□□□ 1.07
APBB3-221ENST00000515056 KIF14Q15058 1648 aa21.73■■□□□ 1.07
APBB3-221ENST00000515056 NEUROD1Q13562 356 aa21.73■■□□□ 1.07
APBB3-221ENST00000515056 TRHP20396 242 aaPredicted RBP21.71■■□□□ 1.07
APBB3-221ENST00000515056 NCOA2Q15596 1464 aa21.71■■□□□ 1.07
APBB3-221ENST00000515056 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.71■■□□□ 1.07
APBB3-221ENST00000515056 SUPT6HQ7KZ85 1726 aaKnown RBP21.7■■□□□ 1.06
APBB3-221ENST00000515056 DIP2BQ9P265 1576 aa21.68■■□□□ 1.06
APBB3-221ENST00000515056 CCNB3Q8WWL7 1395 aa21.66■■□□□ 1.06
APBB3-221ENST00000515056 GLI2P10070 1586 aa21.66■■□□□ 1.06
APBB3-221ENST00000515056 ABCA9Q8IUA7 1624 aa21.65■■□□□ 1.06
APBB3-221ENST00000515056 CD109Q6YHK3 1445 aa21.65■■□□□ 1.06
APBB3-221ENST00000515056 PHLDB1Q86UU1 1377 aa21.65■■□□□ 1.06
APBB3-221ENST00000515056 TTC37Q6PGP7 1564 aa21.64■■□□□ 1.06
APBB3-221ENST00000515056 GPATCH8Q9UKJ3 1502 aaKnown RBP21.63■■□□□ 1.05
APBB3-221ENST00000515056 KIF13AQ9H1H9 1805 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms