RNA–Protein interactions for RNA: ENST00000514934.1

SGCA-211, Transcript of sarcoglycan alpha, humanhuman

TSL 4

Gene SGCA, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-211ENST00000514934 KIAA0586Q9BVV6 1533 aa25.48■■□□□ 1.67
SGCA-211ENST00000514934 JPH4Q96JJ6 628 aa25.45■■□□□ 1.66
SGCA-211ENST00000514934 CARMIL1Q5VZK9 1371 aa25.44■■□□□ 1.66
SGCA-211ENST00000514934 KIF13AQ9H1H9 1805 aa25.35■■□□□ 1.65
SGCA-211ENST00000514934 TRHP20396 242 aaPredicted RBP25.35■■□□□ 1.65
SGCA-211ENST00000514934 ADCY10Q96PN6 1610 aa25.34■■□□□ 1.65
SGCA-211ENST00000514934 IQGAP2Q13576 1575 aa25.33■■□□□ 1.65
SGCA-211ENST00000514934 RAPGEF2Q9Y4G8 1499 aa25.28■■□□□ 1.64
SGCA-211ENST00000514934 CTTNBP2Q8WZ74 1663 aa25.25■■□□□ 1.63
SGCA-211ENST00000514934 DISP1Q96F81 1524 aa25.22■■□□□ 1.63
SGCA-211ENST00000514934 UGGT2Q9NYU1 1516 aa25.21■■□□□ 1.63
SGCA-211ENST00000514934 MAPKBP1O60336 1514 aa25.2■■□□□ 1.62
SGCA-211ENST00000514934 PRXQ9BXM0 1461 aa25.19■■□□□ 1.62
SGCA-211ENST00000514934 KIAA0556O60303 1618 aa25.13■■□□□ 1.61
SGCA-211ENST00000514934 DIP2BQ9P265 1576 aa25.12■■□□□ 1.61
SGCA-211ENST00000514934 TNIKQ9UKE5 1360 aa25.1■■□□□ 1.61
SGCA-211ENST00000514934 PTPRGP23470 1445 aa25.09■■□□□ 1.61
SGCA-211ENST00000514934 CARMIL2Q6F5E8 1435 aa25.09■■□□□ 1.61
SGCA-211ENST00000514934 ABCC10Q5T3U5 1492 aa25.08■■□□□ 1.6
SGCA-211ENST00000514934 UHRF1BP1LA0JNW5 1464 aa25.05■■□□□ 1.6
SGCA-211ENST00000514934 ABCC2Q92887 1545 aa25.02■■□□□ 1.6
SGCA-211ENST00000514934 UACAQ9BZF9 1416 aa24.96■■□□□ 1.59
SGCA-211ENST00000514934 AEBP2Q6ZN18 517 aaPredicted RBP24.95■■□□□ 1.58
SGCA-211ENST00000514934 KDM5BQ9UGL1 1544 aa24.95■■□□□ 1.58
SGCA-211ENST00000514934 ZCCHC11Q5TAX3 1644 aaKnown RBP24.94■■□□□ 1.58
SGCA-211ENST00000514934 TSPOAP1O95153 1857 aa24.92■■□□□ 1.58
SGCA-211ENST00000514934 PPRC1Q5VV67 1664 aaKnown RBP24.92■■□□□ 1.58
SGCA-211ENST00000514934 ABCA8O94911 1581 aa24.9■■□□□ 1.58
SGCA-211ENST00000514934 EEA1Q15075 1411 aa24.9■■□□□ 1.58
SGCA-211ENST00000514934 SAMD9Q5K651 1589 aa24.89■■□□□ 1.58
SGCA-211ENST00000514934 NPM1P06748 294 aaKnown RBP eCLIP24.89■■□□□ 1.58
SGCA-211ENST00000514934 GLI2P10070 1586 aa24.88■■□□□ 1.57
SGCA-211ENST00000514934 CSRNP3Q8WYN3 585 aa24.88■■□□□ 1.57
SGCA-211ENST00000514934 GOLGA3Q08378 1498 aa24.88■■□□□ 1.57
SGCA-211ENST00000514934 ASXL2Q76L83 1435 aa24.87■■□□□ 1.57
SGCA-211ENST00000514934 PLB1Q6P1J6 1458 aa24.86■■□□□ 1.57
SGCA-211ENST00000514934 FAM69CQ0P6D2 419 aa24.86■■□□□ 1.57
SGCA-211ENST00000514934 TTBK1Q5TCY1 1321 aaPredicted RBP24.86■■□□□ 1.57
SGCA-211ENST00000514934 KIF21BO75037 1637 aa24.83■■□□□ 1.57
SGCA-211ENST00000514934 MAP3K4Q9Y6R4 1608 aa24.81■■□□□ 1.56
SGCA-211ENST00000514934 EPRSP07814 1512 aaKnown RBP24.77■■□□□ 1.56
SGCA-211ENST00000514934 CHIC1Q5VXU3 224 aa24.74■■□□□ 1.55
SGCA-211ENST00000514934 KDM6BO15054 1643 aa24.72■■□□□ 1.55
SGCA-211ENST00000514934 WDR7Q9Y4E6 1490 aa24.7■■□□□ 1.54
SGCA-211ENST00000514934 RAPGEF6Q8TEU7 1601 aa24.65■■□□□ 1.54
SGCA-211ENST00000514934 CFAP43Q8NDM7 1665 aa24.64■■□□□ 1.53
SGCA-211ENST00000514934 FAM9AQ8IZU1 332 aaPredicted RBP24.62■■□□□ 1.53
SGCA-211ENST00000514934 ATP10BO94823 1461 aa24.62■■□□□ 1.53
SGCA-211ENST00000514934 COL17A1Q9UMD9 1497 aaPredicted RBP24.59■■□□□ 1.53
SGCA-211ENST00000514934 P3H3Q8IVL6 736 aa24.59■■□□□ 1.53
SGCA-211ENST00000514934 EFCAB5A4FU69 1503 aa24.59■■□□□ 1.53
SGCA-211ENST00000514934 FHOD3Q2V2M9 1422 aa24.57■■□□□ 1.52
SGCA-211ENST00000514934 NUP153P49790 1475 aaKnown RBP24.56■■□□□ 1.52
SGCA-211ENST00000514934 MAGI3Q5TCQ9 1506 aa24.52■■□□□ 1.52
SGCA-211ENST00000514934 ABCA9Q8IUA7 1624 aa24.51■■□□□ 1.51
SGCA-211ENST00000514934 TEX14Q8IWB6 1497 aa24.51■■□□□ 1.51
SGCA-211ENST00000514934 ARHGAP35Q9NRY4 1499 aa24.44■■□□□ 1.5
SGCA-211ENST00000514934 CD109Q6YHK3 1445 aa24.44■■□□□ 1.5
SGCA-211ENST00000514934 ARID3CA6NKF2 412 aa24.41■■□□□ 1.5
SGCA-211ENST00000514934 LRRIQ1Q96JM4 1722 aa24.41■■□□□ 1.5
SGCA-211ENST00000514934 RANGAP1P46060 587 aaPredicted RBP24.38■■□□□ 1.49
SGCA-211ENST00000514934 KCNH8Q96L42 1107 aa24.38■■□□□ 1.49
SGCA-211ENST00000514934 CDK13Q14004 1512 aaKnown RBP24.34■■□□□ 1.49
SGCA-211ENST00000514934 ARAP3Q8WWN8 1544 aa24.33■■□□□ 1.49
SGCA-211ENST00000514934 KDM4FA0A1W2PPD8 638 aa24.31■■□□□ 1.48
SGCA-211ENST00000514934 TTC37Q6PGP7 1564 aa24.29■■□□□ 1.48
SGCA-211ENST00000514934 HECW1Q76N89 1606 aa24.29■■□□□ 1.48
SGCA-211ENST00000514934 UBTFP17480 764 aaKnown RBP24.29■■□□□ 1.48
SGCA-211ENST00000514934 EHMT2Q96KQ7 1210 aa24.29■■□□□ 1.48
SGCA-211ENST00000514934 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.29■■□□□ 1.48
SGCA-211ENST00000514934 FRMPD1Q5SYB0 1578 aa24.28■■□□□ 1.48
SGCA-211ENST00000514934 FMN1Q68DA7 1419 aa24.26■■□□□ 1.47
SGCA-211ENST00000514934 NEO1Q92859 1461 aa24.24■■□□□ 1.47
SGCA-211ENST00000514934 RICTORQ6R327 1708 aa24.21■■□□□ 1.47
SGCA-211ENST00000514934 ADGRL1O94910 1474 aa24.21■■□□□ 1.47
SGCA-211ENST00000514934 PCF11O94913 1555 aaKnown RBP24.2■■□□□ 1.46
SGCA-211ENST00000514934 PHLDB1Q86UU1 1377 aa24.18■■□□□ 1.46
SGCA-211ENST00000514934 KIF14Q15058 1648 aa24.18■■□□□ 1.46
SGCA-211ENST00000514934 CFAP74Q9C0B2 1584 aa24.16■■□□□ 1.46
SGCA-211ENST00000514934 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.15■■□□□ 1.46
SGCA-211ENST00000514934 HNRNPUL2Q1KMD3 747 aaKnown RBP24.15■■□□□ 1.46
SGCA-211ENST00000514934 PLEKHD1A6NEE1 506 aa24.14■■□□□ 1.45
SGCA-211ENST00000514934 MYO5CQ9NQX4 1742 aa24.14■■□□□ 1.45
SGCA-211ENST00000514934 CASKIN1Q8WXD9 1431 aa24.1■■□□□ 1.45
SGCA-211ENST00000514934 FANCAO15360 1455 aa24.1■■□□□ 1.45
SGCA-211ENST00000514934 ZMYM4Q5VZL5 1548 aa24.06■■□□□ 1.44
SGCA-211ENST00000514934 TROQ12816 1431 aaPredicted RBP24.06■■□□□ 1.44
SGCA-211ENST00000514934 AKNAQ7Z591 1439 aa24.06■■□□□ 1.44
SGCA-211ENST00000514934 SIGLEC1Q9BZZ2 1709 aa24.06■■□□□ 1.44
SGCA-211ENST00000514934 CDC42BPBQ9Y5S2 1711 aa24.06■■□□□ 1.44
SGCA-211ENST00000514934 ARHGEF40Q8TER5 1519 aa24.05■■□□□ 1.44
SGCA-211ENST00000514934 PLCH2O75038 1416 aa24.05■■□□□ 1.44
SGCA-211ENST00000514934 RAPGEF3O95398 923 aa24.05■■□□□ 1.44
SGCA-211ENST00000514934 CLIP1P30622 1438 aa24.04■■□□□ 1.44
SGCA-211ENST00000514934 FYCO1Q9BQS8 1478 aa24.04■■□□□ 1.44
SGCA-211ENST00000514934 ADAMTSL3P82987 1691 aa24.03■■□□□ 1.44
SGCA-211ENST00000514934 CCDC18Q5T9S5 1454 aa24.01■■□□□ 1.43
SGCA-211ENST00000514934 ILDR1Q86SU0 546 aaPredicted RBP24.01■■□□□ 1.43
SGCA-211ENST00000514934 DENND4BO75064 1496 aaPredicted RBP24■■□□□ 1.43
SGCA-211ENST00000514934 CDC42BPAQ5VT25 1732 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms