RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 FGD5Q6ZNL6 1462 aa10.98□□□□□ -0.65
PDLIM5-219ENST00000514743 KLHL34Q8N239 644 aa10.96□□□□□ -0.65
PDLIM5-219ENST00000514743 CCER1Q8TC90 406 aaPredicted RBP10.96□□□□□ -0.66
PDLIM5-219ENST00000514743 SALL2Q9Y467 1007 aaPredicted RBP10.96□□□□□ -0.66
PDLIM5-219ENST00000514743 CUX2O14529 1486 aa10.95□□□□□ -0.66
PDLIM5-219ENST00000514743 FANCD2Q9BXW9 1451 aa10.95□□□□□ -0.66
PDLIM5-219ENST00000514743 DNMBPQ6XZF7 1577 aa10.94□□□□□ -0.66
PDLIM5-219ENST00000514743 ARHGAP35Q9NRY4 1499 aa10.94□□□□□ -0.66
PDLIM5-219ENST00000514743 RANGAP1P46060 587 aaPredicted RBP10.93□□□□□ -0.66
PDLIM5-219ENST00000514743 IGF1RP08069 1367 aa10.92□□□□□ -0.66
PDLIM5-219ENST00000514743 AMER1Q5JTC6 1135 aaPredicted RBP10.92□□□□□ -0.66
PDLIM5-219ENST00000514743 WDR97A6NE52 1622 aa10.92□□□□□ -0.66
PDLIM5-219ENST00000514743 NESP48681 1621 aa10.92□□□□□ -0.66
PDLIM5-219ENST00000514743 ZBTB22O15209 634 aa10.9□□□□□ -0.67
PDLIM5-219ENST00000514743 TOPBP1Q92547 1522 aa10.89□□□□□ -0.67
PDLIM5-219ENST00000514743 LAMC3Q9Y6N6 1575 aa10.89□□□□□ -0.67
PDLIM5-219ENST00000514743 ABCA10Q8WWZ4 1543 aa10.87□□□□□ -0.67
PDLIM5-219ENST00000514743 POLA1P09884 1462 aaPredicted RBP10.87□□□□□ -0.67
PDLIM5-219ENST00000514743 RAD54L2Q9Y4B4 1467 aa10.86□□□□□ -0.67
PDLIM5-219ENST00000514743 CTTNBP2Q8WZ74 1663 aa10.85□□□□□ -0.67
PDLIM5-219ENST00000514743 CARMIL1Q5VZK9 1371 aa10.85□□□□□ -0.67
PDLIM5-219ENST00000514743 CUL7Q14999 1698 aa10.85□□□□□ -0.67
PDLIM5-219ENST00000514743 KANK4Q5T7N3 995 aaPredicted RBP10.84□□□□□ -0.67
PDLIM5-219ENST00000514743 KIF21AQ7Z4S6 1674 aa10.84□□□□□ -0.67
PDLIM5-219ENST00000514743 NEFLP07196 543 aa10.84□□□□□ -0.67
PDLIM5-219ENST00000514743 URB2Q14146 1524 aaKnown RBP10.84□□□□□ -0.67
PDLIM5-219ENST00000514743 RRBP1Q9P2E9 1410 aaKnown RBP10.83□□□□□ -0.68
PDLIM5-219ENST00000514743 HNRNPUL2Q1KMD3 747 aaKnown RBP10.83□□□□□ -0.68
PDLIM5-219ENST00000514743 CFAP43Q8NDM7 1665 aa10.83□□□□□ -0.68
PDLIM5-219ENST00000514743 TIAM1Q13009 1591 aa10.83□□□□□ -0.68
PDLIM5-219ENST00000514743 PDIA4P13667 645 aaKnown RBP10.82□□□□□ -0.68
PDLIM5-219ENST00000514743 ABCA5Q8WWZ7 1642 aa10.82□□□□□ -0.68
PDLIM5-219ENST00000514743 ARXQ96QS3 562 aa10.82□□□□□ -0.68
PDLIM5-219ENST00000514743 PDE4CQ08493 712 aa10.81□□□□□ -0.68
PDLIM5-219ENST00000514743 MAP3K1Q13233 1512 aa10.81□□□□□ -0.68
PDLIM5-219ENST00000514743 PCF11O94913 1555 aaKnown RBP10.8□□□□□ -0.68
PDLIM5-219ENST00000514743 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.77□□□□□ -0.69
PDLIM5-219ENST00000514743 DNAJC5BQ9UF47 199 aa10.76□□□□□ -0.69
PDLIM5-219ENST00000514743 TIMELESSQ9UNS1 1208 aa10.76□□□□□ -0.69
PDLIM5-219ENST00000514743 EFCAB5A4FU69 1503 aa10.76□□□□□ -0.69
PDLIM5-219ENST00000514743 TARBP1Q13395 1621 aaKnown RBP10.75□□□□□ -0.69
PDLIM5-219ENST00000514743 ERICH6BQ5W0A0 696 aa10.75□□□□□ -0.69
PDLIM5-219ENST00000514743 LRRIQ1Q96JM4 1722 aa10.75□□□□□ -0.69
PDLIM5-219ENST00000514743 LRRC9Q6ZRR7 1453 aa10.74□□□□□ -0.69
PDLIM5-219ENST00000514743 TSHZ2Q9NRE2 1034 aa10.74□□□□□ -0.69
PDLIM5-219ENST00000514743 DHX57Q6P158 1386 aaKnown RBP10.73□□□□□ -0.69
PDLIM5-219ENST00000514743 SAMD9Q5K651 1589 aa10.73□□□□□ -0.69
PDLIM5-219ENST00000514743 CCNB3Q8WWL7 1395 aa10.72□□□□□ -0.69
PDLIM5-219ENST00000514743 DIEXFQ68CQ4 756 aaKnown RBP10.72□□□□□ -0.69
PDLIM5-219ENST00000514743 PBRM1Q86U86 1689 aa10.72□□□□□ -0.69
PDLIM5-219ENST00000514743 FHAD1B1AJZ9 1412 aa10.72□□□□□ -0.69
PDLIM5-219ENST00000514743 PDS5BQ9NTI5 1447 aa10.72□□□□□ -0.69
PDLIM5-219ENST00000514743 FYCO1Q9BQS8 1478 aa10.71□□□□□ -0.7
PDLIM5-219ENST00000514743 FHOD3Q2V2M9 1422 aa10.7□□□□□ -0.7
PDLIM5-219ENST00000514743 AQRO60306 1485 aaKnown RBP eCLIP10.7□□□□□ -0.7
PDLIM5-219ENST00000514743 GAPVD1Q14C86 1478 aa10.69□□□□□ -0.7
PDLIM5-219ENST00000514743 SNAPC4Q5SXM2 1469 aa10.69□□□□□ -0.7
PDLIM5-219ENST00000514743 ZNF316A6NFI3 1004 aaPredicted RBP10.68□□□□□ -0.7
PDLIM5-219ENST00000514743 PHLDB1Q86UU1 1377 aa10.68□□□□□ -0.7
PDLIM5-219ENST00000514743 A0A0U1RQG5 324 aaPredicted RBP10.68□□□□□ -0.7
PDLIM5-219ENST00000514743 CASKIN1Q8WXD9 1431 aa10.67□□□□□ -0.7
PDLIM5-219ENST00000514743 TDRD9Q8NDG6 1382 aaKnown RBP10.67□□□□□ -0.7
PDLIM5-219ENST00000514743 CLSPNQ9HAW4 1339 aa10.67□□□□□ -0.7
PDLIM5-219ENST00000514743 BCL11BQ9C0K0 894 aaPredicted RBP10.65□□□□□ -0.7
PDLIM5-219ENST00000514743 P3H3Q8IVL6 736 aa10.64□□□□□ -0.71
PDLIM5-219ENST00000514743 MAPKBP1O60336 1514 aa10.64□□□□□ -0.71
PDLIM5-219ENST00000514743 ADAMTS12P58397 1594 aa10.63□□□□□ -0.71
PDLIM5-219ENST00000514743 YTHDC1Q96MU7 727 aaKnown RBP10.63□□□□□ -0.71
PDLIM5-219ENST00000514743 THOC2Q8NI27 1593 aaKnown RBP10.62□□□□□ -0.71
PDLIM5-219ENST00000514743 FMN1Q68DA7 1419 aa10.62□□□□□ -0.71
PDLIM5-219ENST00000514743 GRIN2BQ13224 1484 aa10.62□□□□□ -0.71
PDLIM5-219ENST00000514743 FGD1P98174 961 aa10.62□□□□□ -0.71
PDLIM5-219ENST00000514743 MYT1LQ9UL68 1186 aa10.62□□□□□ -0.71
PDLIM5-219ENST00000514743 DEKP35659 375 aaKnown RBP10.61□□□□□ -0.71
PDLIM5-219ENST00000514743 RAB3GAP2Q9H2M9 1393 aa10.61□□□□□ -0.71
PDLIM5-219ENST00000514743 MRC2Q9UBG0 1479 aa10.61□□□□□ -0.71
PDLIM5-219ENST00000514743 PPP4R3CPQ6ZMV5 832 aa10.6□□□□□ -0.71
PDLIM5-219ENST00000514743 WDR62O43379 1518 aa10.59□□□□□ -0.71
PDLIM5-219ENST00000514743 NPM3O75607 178 aaKnown RBP10.59□□□□□ -0.71
PDLIM5-219ENST00000514743 IQGAP2Q13576 1575 aa10.57□□□□□ -0.72
PDLIM5-219ENST00000514743 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.57□□□□□ -0.72
PDLIM5-219ENST00000514743 SETD5Q9C0A6 1442 aa10.57□□□□□ -0.72
PDLIM5-219ENST00000514743 TULP1O00294 542 aaPredicted RBP10.57□□□□□ -0.72
PDLIM5-219ENST00000514743 MAGI3Q5TCQ9 1506 aa10.57□□□□□ -0.72
PDLIM5-219ENST00000514743 SUPT6HQ7KZ85 1726 aaKnown RBP10.56□□□□□ -0.72
PDLIM5-219ENST00000514743 ITGAEP38570 1179 aa10.56□□□□□ -0.72
PDLIM5-219ENST00000514743 ARHGEF11O15085 1522 aa10.56□□□□□ -0.72
PDLIM5-219ENST00000514743 EHBP1L1Q8N3D4 1523 aa10.55□□□□□ -0.72
PDLIM5-219ENST00000514743 FGD6Q6ZV73 1430 aa10.55□□□□□ -0.72
PDLIM5-219ENST00000514743 ZNF608Q9ULD9 1512 aaPredicted RBP10.54□□□□□ -0.72
PDLIM5-219ENST00000514743 GLIPR1L2Q4G1C9 344 aa10.54□□□□□ -0.72
PDLIM5-219ENST00000514743 EIF4G3O43432 1585 aaKnown RBP10.53□□□□□ -0.72
PDLIM5-219ENST00000514743 HECW1Q76N89 1606 aa10.53□□□□□ -0.72
PDLIM5-219ENST00000514743 UGGT2Q9NYU1 1516 aa10.53□□□□□ -0.72
PDLIM5-219ENST00000514743 TAF7LQ5H9L4 462 aa10.52□□□□□ -0.72
PDLIM5-219ENST00000514743 NCOA2Q15596 1464 aa10.52□□□□□ -0.72
PDLIM5-219ENST00000514743 IFT140Q96RY7 1462 aa10.52□□□□□ -0.73
PDLIM5-219ENST00000514743 ATP1B4Q9UN42 357 aaPredicted RBP10.52□□□□□ -0.73
PDLIM5-219ENST00000514743 MIER1Q8N108 512 aa10.51□□□□□ -0.73
PDLIM5-219ENST00000514743 PTPRKQ15262 1439 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms